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The map label for this gene is 121998106

Identifier: 121998106

GI number: 121998106

Start: 1433968

End: 1434627

Strand: Reverse

Name: 121998106

Synonym: Hhal_1324

Alternate gene names: NA

Gene position: 1434627-1433968 (Counterclockwise)

Preceding gene: 121998109

Following gene: 121998103

Centisome position: 53.56

GC content: 66.97

Gene sequence:

>660_bases
ATGAGCGAACGGCAGCGGGTCTTCATCTGGGATCTGCCCACGCGGCTGTTTCACTGGGGGCTGGTCTTGGCGCTGGGCCT
GTCCTGGTATAGCGCGGAGCAAGGCCTGTCCGGATGGGACCTGCACAAGTGGAGCGGCTACGCGGTCTTGACTCTGGTCC
TGTTCCGGATCCTGTGGGGGTTCGTGGGGAGCGAGACAGCGCGTTTCCGTGATTTCCTGGCCGGGCCGCGAACGGTCGGG
AGGTATTTGGTGGGGTGGTGGCGCGATCGCACCCCCAGCCGCGGCCACAATCCCCTAGGGGGCTGGGCGGTGATCGTTCT
GCTGGCCCTGGTGCTGGCGCAGGCGGTGACGGGGCTGTTCGCCACCGACGATATCCTCCGCAGTGGCCCGCTGACCGGTT
GGGTCGGCTCCGACCTGGAGCGGACCATGACCCGGCTGCATACGCAGATCTTCGATGTACTCCTGATCCTGGTGACCTTC
CATGTGGCGGCCATCGCGGTGTATCGCTGGGTACGGGGCGAGCGCTTGCTGGTGGCGATGATCAGCGGTTACAAGCGCAA
TGGCTTCGCCCCGCCATGGATCGCCCCCCTGTACCGTGCGGTGGTCGCCGGGACAGTCGCCGCGGGGGTGGTGTGGCTGC
TCCTGGTGACGGCGCCGTGA

Upstream 100 bases:

>100_bases
TGGGCGCATGACAGCAGACAAGCGGAGACGCTAGCCTGGTGAGGCGTAGGGTGCAGACAGTCGGTCGGATACGGTCGCCC
GGAGACATAGCGGGAGGACG

Downstream 100 bases:

>100_bases
CGGCAGCGGGCCACCGTGCAGCGGCCCGCGCGCGGTAGCTTAGTGTGCCGTCATCCCGCCATCGACCATGTAGTTGGACC
CGGTAATCCCGGAGGCGGCC

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Cytochrome B/B6 Domain; Dihem Cytochrome C; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Nickel-Dependent Hydrogenase Cytochrome B-Type Subunit; Cytochrome B Oxidoreductase Protein; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSERQRVFIWDLPTRLFHWGLVLALGLSWYSAEQGLSGWDLHKWSGYAVLTLVLFRILWGFVGSETARFRDFLAGPRTVG
RYLVGWWRDRTPSRGHNPLGGWAVIVLLALVLAQAVTGLFATDDILRSGPLTGWVGSDLERTMTRLHTQIFDVLLILVTF
HVAAIAVYRWVRGERLLVAMISGYKRNGFAPPWIAPLYRAVVAGTVAAGVVWLLLVTAP

Sequences:

>Translated_219_residues
MSERQRVFIWDLPTRLFHWGLVLALGLSWYSAEQGLSGWDLHKWSGYAVLTLVLFRILWGFVGSETARFRDFLAGPRTVG
RYLVGWWRDRTPSRGHNPLGGWAVIVLLALVLAQAVTGLFATDDILRSGPLTGWVGSDLERTMTRLHTQIFDVLLILVTF
HVAAIAVYRWVRGERLLVAMISGYKRNGFAPPWIAPLYRAVVAGTVAAGVVWLLLVTAP
>Mature_218_residues
SERQRVFIWDLPTRLFHWGLVLALGLSWYSAEQGLSGWDLHKWSGYAVLTLVLFRILWGFVGSETARFRDFLAGPRTVGR
YLVGWWRDRTPSRGHNPLGGWAVIVLLALVLAQAVTGLFATDDILRSGPLTGWVGSDLERTMTRLHTQIFDVLLILVTFH
VAAIAVYRWVRGERLLVAMISGYKRNGFAPPWIAPLYRAVVAGTVAAGVVWLLLVTAP

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24540; Mature: 24409

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERQRVFIWDLPTRLFHWGLVLALGLSWYSAEQGLSGWDLHKWSGYAVLTLVLFRILWG
CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
FVGSETARFRDFLAGPRTVGRYLVGWWRDRTPSRGHNPLGGWAVIVLLALVLAQAVTGLF
HHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ATDDILRSGPLTGWVGSDLERTMTRLHTQIFDVLLILVTFHVAAIAVYRWVRGERLLVAM
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ISGYKRNGFAPPWIAPLYRAVVAGTVAAGVVWLLLVTAP
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SERQRVFIWDLPTRLFHWGLVLALGLSWYSAEQGLSGWDLHKWSGYAVLTLVLFRILWG
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
FVGSETARFRDFLAGPRTVGRYLVGWWRDRTPSRGHNPLGGWAVIVLLALVLAQAVTGLF
HHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ATDDILRSGPLTGWVGSDLERTMTRLHTQIFDVLLILVTFHVAAIAVYRWVRGERLLVAM
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ISGYKRNGFAPPWIAPLYRAVVAGTVAAGVVWLLLVTAP
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA