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The map label for this gene is 121998093

Identifier: 121998093

GI number: 121998093

Start: 1421753

End: 1422976

Strand: Reverse

Name: 121998093

Synonym: Hhal_1311

Alternate gene names: NA

Gene position: 1422976-1421753 (Counterclockwise)

Preceding gene: 121998094

Following gene: 121998092

Centisome position: 53.13

GC content: 68.46

Gene sequence:

>1224_bases
ATGGGCCTGTTCAATCTCGGCAAGAAGGACGCCTACGGCAAGCAGCGGCGCGTTGAGCACCGCGGCAAGTACCTGCGGGC
CAGTCGCACCGGCGGCGTGGCGCTGCGCGCCCAGGCCCGGGCGGCGGGTGTGAACCTCACCGCCAACACCCGGCGCGGTG
TCCGGGCTTCGATGACGCCGGCGAAGAACACCCAGGTGGCCTTGCAGAACGGCCGTTTCATCCTGCGCGGACGCTACGGG
AACGGGCCGACCAAGCTGAACCTCTCCAAAAGCGGTGCGACGGTCTCCACGCGCAACCGGCTCGGCTCGTTCAACTGGCT
CAAGCCCAACCGCTCCTCGGCGAAGCTCTTCGGCGTCCAGGTCCGGGGGCAGAAGGCGGCCCAGCTTCAGGTCTTCTATA
TGCTCTTCGCCGCCGTTGTCGGTGGCGTGCAGCTGCTCCTGATGCTCATTGGCGGGCTGCTGCGCGGCGCCGTTGCCCTC
GGGCAGTGGGTGGGTGACCACGTGCACGCCCTGCCGCGGCGTTGGCGCAATGCCCGGTTGCGCCGCCAGCGCGGGCGGAT
CGACGAGGCCGTTGAGCAGGCGATCAACCGCTGGGACGCGGACCGGCTCAGTGCTGCAGTCGCCCTGGCGGTTGCCCTAT
GGGGGCGCGGTGAAACGCTCAAAGCGGGGTGGCACCGCGTCCAGCAACGTGTCACCCAGAATCCGGGCTTTGAAGCCCTG
CCCCGATCACCGGAGGTGTTCGAAGAGGTCGCTGCCGAGCTCGAGCGCTGCCGGGCCGCGGTGAAGCTGACACAGGATGC
GCATCGGATCGTGCTCGCGTTGCTGGCGGAGGCCGCTACGCAAGGGATGGACGGGGGGCGGCGGGCAGAGCTGCTGTTCG
ATGCGGACGATCTGGCCCTGGCCCGGGGTCCGCGGACCGTGCTGCAGGAAGAGCTGCTCGAGATCTTCGCCGACCATGCG
CAACTCTGTCTGGAGCCGGCCTTGCCGGTGGACACGACACAACGGCAGTGCGGCCGATCCCGCCCAGGGCGTGACCTGTC
GCAGGGACTGATCGACCTCAACACCGCCTCCATCGAAGAGCTTCAGGTGATCCCGCACATCGGCCCGGAGCGCGCCGAGG
CGATCGTCGCCATGCGACCGATTCGGCGGATCGAGCAGCTTGAAGAGGTCGACGGCATCGGACCGAGCCGGCTCGCGGAG
ATTGCCGAACAAACCCGGGTATGA

Upstream 100 bases:

>100_bases
TCGTTGTGGAGCTGGCGGGCCTCGGGATGGGGGGCGCTGCCATCATGCTGGATGCGCGCAAGCCCTTCCCCGCGTAACAC
CTGCACCGGTGGGGAAGGCG

Downstream 100 bases:

>100_bases
GTGCGAGCGATGAAACGGAGGACCGTGGCTGTAGAGCTTAGGCTCGCTTTCCACAAAACCTGTGGATAACTATGTGGAGA
AACTCGACCGAGGCCTTGGC

Product: helix-hairpin-helix DNA-binding, class 1

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MGLFNLGKKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVNLTANTRRGVRASMTPAKNTQVALQNGRFILRGRYG
NGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKLFGVQVRGQKAAQLQVFYMLFAAVVGGVQLLLMLIGGLLRGAVAL
GQWVGDHVHALPRRWRNARLRRQRGRIDEAVEQAINRWDADRLSAAVALAVALWGRGETLKAGWHRVQQRVTQNPGFEAL
PRSPEVFEEVAAELERCRAAVKLTQDAHRIVLALLAEAATQGMDGGRRAELLFDADDLALARGPRTVLQEELLEIFADHA
QLCLEPALPVDTTQRQCGRSRPGRDLSQGLIDLNTASIEELQVIPHIGPERAEAIVAMRPIRRIEQLEEVDGIGPSRLAE
IAEQTRV

Sequences:

>Translated_407_residues
MGLFNLGKKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVNLTANTRRGVRASMTPAKNTQVALQNGRFILRGRYG
NGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKLFGVQVRGQKAAQLQVFYMLFAAVVGGVQLLLMLIGGLLRGAVAL
GQWVGDHVHALPRRWRNARLRRQRGRIDEAVEQAINRWDADRLSAAVALAVALWGRGETLKAGWHRVQQRVTQNPGFEAL
PRSPEVFEEVAAELERCRAAVKLTQDAHRIVLALLAEAATQGMDGGRRAELLFDADDLALARGPRTVLQEELLEIFADHA
QLCLEPALPVDTTQRQCGRSRPGRDLSQGLIDLNTASIEELQVIPHIGPERAEAIVAMRPIRRIEQLEEVDGIGPSRLAE
IAEQTRV
>Mature_406_residues
GLFNLGKKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVNLTANTRRGVRASMTPAKNTQVALQNGRFILRGRYGN
GPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKLFGVQVRGQKAAQLQVFYMLFAAVVGGVQLLLMLIGGLLRGAVALG
QWVGDHVHALPRRWRNARLRRQRGRIDEAVEQAINRWDADRLSAAVALAVALWGRGETLKAGWHRVQQRVTQNPGFEALP
RSPEVFEEVAAELERCRAAVKLTQDAHRIVLALLAEAATQGMDGGRRAELLFDADDLALARGPRTVLQEELLEIFADHAQ
LCLEPALPVDTTQRQCGRSRPGRDLSQGLIDLNTASIEELQVIPHIGPERAEAIVAMRPIRRIEQLEEVDGIGPSRLAEI
AEQTRV

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44809; Mature: 44678

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFNLGKKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVNLTANTRRGVRASMTP
CCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEHHHHCCCCEEECCCCCCEECCCC
AKNTQVALQNGRFILRGRYGNGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKLFGVQ
CCCCEEEEECCCEEEEEECCCCCCEEEECCCCCEEEHHHHCCCCCCCCCCCCCCEEEEEE
VRGQKAAQLQVFYMLFAAVVGGVQLLLMLIGGLLRGAVALGQWVGDHVHALPRRWRNARL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRQRGRIDEAVEQAINRWDADRLSAAVALAVALWGRGETLKAGWHRVQQRVTQNPGFEAL
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PRSPEVFEEVAAELERCRAAVKLTQDAHRIVLALLAEAATQGMDGGRRAELLFDADDLAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
ARGPRTVLQEELLEIFADHAQLCLEPALPVDTTQRQCGRSRPGRDLSQGLIDLNTASIEE
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHCHHCCCCCCHHH
LQVIPHIGPERAEAIVAMRPIRRIEQLEEVDGIGPSRLAEIAEQTRV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GLFNLGKKDAYGKQRRVEHRGKYLRASRTGGVALRAQARAAGVNLTANTRRGVRASMTP
CCCCCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEHHHHCCCCEEECCCCCCEECCCC
AKNTQVALQNGRFILRGRYGNGPTKLNLSKSGATVSTRNRLGSFNWLKPNRSSAKLFGVQ
CCCCEEEEECCCEEEEEECCCCCCEEEECCCCCEEEHHHHCCCCCCCCCCCCCCEEEEEE
VRGQKAAQLQVFYMLFAAVVGGVQLLLMLIGGLLRGAVALGQWVGDHVHALPRRWRNARL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRQRGRIDEAVEQAINRWDADRLSAAVALAVALWGRGETLKAGWHRVQQRVTQNPGFEAL
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PRSPEVFEEVAAELERCRAAVKLTQDAHRIVLALLAEAATQGMDGGRRAELLFDADDLAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
ARGPRTVLQEELLEIFADHAQLCLEPALPVDTTQRQCGRSRPGRDLSQGLIDLNTASIEE
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHCHHCCCCCCHHH
LQVIPHIGPERAEAIVAMRPIRRIEQLEEVDGIGPSRLAEIAEQTRV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA