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The map label for this gene is yoqW [H]

Identifier: 121998089

GI number: 121998089

Start: 1417061

End: 1417714

Strand: Reverse

Name: yoqW [H]

Synonym: Hhal_1305

Alternate gene names: 121998089

Gene position: 1417714-1417061 (Counterclockwise)

Preceding gene: 121998090

Following gene: 121998088

Centisome position: 52.93

GC content: 63.3

Gene sequence:

>654_bases
GTGTGTGGCCGGTTCGCCCGTTACGCTCCGCATTCCCGAATCATGCGAGCGCTTCGCATCGATTACGACGACTGCGGCGA
ACTCTCACCTGACTACAACGTACCGCCGGGCACGCAGCAGCCGGTCGCCGTGTCTTGCGATCACGGCAGGCATCTCTTGC
CGTTGCTTTGGGGATTTCGGCCATGGTGGGCCGACGCCAGCCAACCCGCACCGATCAACGCCCGGGCGGAGACGGTCGCC
TCCAGCCCTTACTTCCGCTCTGCATTCGCCCATCGCCGCTGCCTGATTCCAGCCAGCGGTTGGTTCGAGTGGCAAAAGGC
CGAACAGGGGAAGGTTCCGCACTTCATCGCCTCCCGGGACGACGACCTGCTGTGCTTCGCGGGTGTCTATGAGCCGGCCA
CCGAAGAACGGGCGGCGTCCTTCGCAATCATCACGCAGCCGTCGAAGGCGCATCTGCAGCCTCTCCACGACCGCATGCCG
CTCGTCCTCGCGCCCGAGTGCTGGGACGAGTGGCTGGATCCCGAAATCAGTGATCGGAAGTCCGTGAAAGCGGCAACTCG
CGGCCTAAATATGGCGCAGCTGGTCGCACATCCGGTCAGCTCTCGGGTGAACACACCCAAGAACAACGGTCCTGACTTGA
TTCGCTCCCTCTAA

Upstream 100 bases:

>100_bases
CGTTGCGGGTTGTAGCCGTGGTGGTCGTGGCCGGATCACACAACGGCCCCGAGGCCGTGCCACAATCGTTTTCGGTCCCC
CGAGTACGGAGTCTGTCACT

Downstream 100 bases:

>100_bases
AGAGTCAGTTGTTCGCAACGGGCGCCGGCTGGCAGTTCATCAGAGCGGCGTCGATGTTTCGACGAAGTGCCATCACCCTT
CCTTGGGGGGCCGCTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MCGRFARYAPHSRIMRALRIDYDDCGELSPDYNVPPGTQQPVAVSCDHGRHLLPLLWGFRPWWADASQPAPINARAETVA
SSPYFRSAFAHRRCLIPASGWFEWQKAEQGKVPHFIASRDDDLLCFAGVYEPATEERAASFAIITQPSKAHLQPLHDRMP
LVLAPECWDEWLDPEISDRKSVKAATRGLNMAQLVAHPVSSRVNTPKNNGPDLIRSL

Sequences:

>Translated_217_residues
MCGRFARYAPHSRIMRALRIDYDDCGELSPDYNVPPGTQQPVAVSCDHGRHLLPLLWGFRPWWADASQPAPINARAETVA
SSPYFRSAFAHRRCLIPASGWFEWQKAEQGKVPHFIASRDDDLLCFAGVYEPATEERAASFAIITQPSKAHLQPLHDRMP
LVLAPECWDEWLDPEISDRKSVKAATRGLNMAQLVAHPVSSRVNTPKNNGPDLIRSL
>Mature_217_residues
MCGRFARYAPHSRIMRALRIDYDDCGELSPDYNVPPGTQQPVAVSCDHGRHLLPLLWGFRPWWADASQPAPINARAETVA
SSPYFRSAFAHRRCLIPASGWFEWQKAEQGKVPHFIASRDDDLLCFAGVYEPATEERAASFAIITQPSKAHLQPLHDRMP
LVLAPECWDEWLDPEISDRKSVKAATRGLNMAQLVAHPVSSRVNTPKNNGPDLIRSL

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=270, Percent_Identity=27.4074074074074, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI54607104, Length=270, Percent_Identity=27.4074074074074, Blast_Score=80, Evalue=1e-15,
Organism=Escherichia coli, GI48994894, Length=222, Percent_Identity=37.3873873873874, Blast_Score=128, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6323761, Length=195, Percent_Identity=32.3076923076923, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355761, Length=234, Percent_Identity=26.9230769230769, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24352; Mature: 24352

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFARYAPHSRIMRALRIDYDDCGELSPDYNVPPGTQQPVAVSCDHGRHLLPLLWGFR
CCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCC
PWWADASQPAPINARAETVASSPYFRSAFAHRRCLIPASGWFEWQKAEQGKVPHFIASRD
CCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCEEECCCCCCCCHHHCCCCCCCEEECCCC
DDLLCFAGVYEPATEERAASFAIITQPSKAHLQPLHDRMPLVLAPECWDEWLDPEISDRK
CCEEEEECCCCCCCHHHHCEEEEEECCCHHHHHHHHHCCCEEECHHHHHHHCCCCCCCHH
SVKAATRGLNMAQLVAHPVSSRVNTPKNNGPDLIRSL
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHCC
>Mature Secondary Structure
MCGRFARYAPHSRIMRALRIDYDDCGELSPDYNVPPGTQQPVAVSCDHGRHLLPLLWGFR
CCCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCC
PWWADASQPAPINARAETVASSPYFRSAFAHRRCLIPASGWFEWQKAEQGKVPHFIASRD
CCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCEEECCCCCCCCHHHCCCCCCCEEECCCC
DDLLCFAGVYEPATEERAASFAIITQPSKAHLQPLHDRMPLVLAPECWDEWLDPEISDRK
CCEEEEECCCCCCCHHHHCEEEEEECCCHHHHHHHHHCCCEEECHHHHHHHCCCCCCCHH
SVKAATRGLNMAQLVAHPVSSRVNTPKNNGPDLIRSL
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]