| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is mtnP [H]
Identifier: 121998049
GI number: 121998049
Start: 1367593
End: 1368324
Strand: Reverse
Name: mtnP [H]
Synonym: Hhal_1259
Alternate gene names: 121998049
Gene position: 1368324-1367593 (Counterclockwise)
Preceding gene: 121998050
Following gene: 121998043
Centisome position: 51.09
GC content: 66.39
Gene sequence:
>732_bases ATGAGTGTCGGCATTATCGGCGGGACGGGGCTGACGTCCCTGGAAGGGCTGGAAATTACCCGCCGCGAGGTGGTCCGGAC CCCGTTCGGCGAGCCTTCGGCCCCCCTGATTCACGGTACGTTCCGGGGCCACAATATCACCTTCCTGGCCCGCCACGGTC ATAGTCACAACATTCCTCCGCATCAGGTCAATTACCGGGCCAACATCTGGGCCCTGCGTCATGTCGGGGTCGATCGTGTG ATCGCCGTGGCTGCCGTCGGCGGCCTCGGGGAGGCCTACGCGCCGCGCCGGATCGCCATCCCGGACCAGATCATCGATTA CACCCACTCGCGCATCTCGACGTTCCACGATCAGGATCTGGAGCACGTCACCCACATCGACTTTACCTATCCCTACGACG CCACGGTGCGGGAGTGGCTGCTCTGTGCTGCCCGCGACGCCGGTATCGACGCGGTGGACGGGGGGACCTACGGCGCGACC CAGGGCCCGCGCCTGGAGACCGCTGCGGAGATTCGCCGGATGCGGCAGGACGGCTGCGACCTGGTGGGGATGACCGGGAT GCCGGAGGCAGCGTTGGCCCGCGAGGCCGAGTTGCGCTACGCCCACTGTGCCGTAGTGGCCAACTGGGCGGCTGGCATGG GGGATGGCGAAGAACTCTCCATGGACGAGATCCGCGAGCACCTGATCCACGGCATGGAGGCGGTGCGGAAGATGATCGCC TCACTGAGCTAG
Upstream 100 bases:
>100_bases GTCGGGGCCTCGGCCGCAACGCGGACGGCATCTACGCCATCGATCAGCGCATCGAACAGGCGGCGAAAACCCAGCAAGAA CCGGATACGGAGGAGCGTTG
Downstream 100 bases:
>100_bases GCGGGGCGCCCAGCCCCGCTTCTCCCGGCGCCACCCGCCGACGCGGCCTCAGATCGGTGCCCCGAAACCGGGTGCACCTC AGTCCTCCGGAGGGCGGTCG
Product: purine phosphorylase family 2
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSVGIIGGTGLTSLEGLEITRREVVRTPFGEPSAPLIHGTFRGHNITFLARHGHSHNIPPHQVNYRANIWALRHVGVDRV IAVAAVGGLGEAYAPRRIAIPDQIIDYTHSRISTFHDQDLEHVTHIDFTYPYDATVREWLLCAARDAGIDAVDGGTYGAT QGPRLETAAEIRRMRQDGCDLVGMTGMPEAALAREAELRYAHCAVVANWAAGMGDGEELSMDEIREHLIHGMEAVRKMIA SLS
Sequences:
>Translated_243_residues MSVGIIGGTGLTSLEGLEITRREVVRTPFGEPSAPLIHGTFRGHNITFLARHGHSHNIPPHQVNYRANIWALRHVGVDRV IAVAAVGGLGEAYAPRRIAIPDQIIDYTHSRISTFHDQDLEHVTHIDFTYPYDATVREWLLCAARDAGIDAVDGGTYGAT QGPRLETAAEIRRMRQDGCDLVGMTGMPEAALAREAELRYAHCAVVANWAAGMGDGEELSMDEIREHLIHGMEAVRKMIA SLS >Mature_242_residues SVGIIGGTGLTSLEGLEITRREVVRTPFGEPSAPLIHGTFRGHNITFLARHGHSHNIPPHQVNYRANIWALRHVGVDRVI AVAAVGGLGEAYAPRRIAIPDQIIDYTHSRISTFHDQDLEHVTHIDFTYPYDATVREWLLCAARDAGIDAVDGGTYGATQ GPRLETAAEIRRMRQDGCDLVGMTGMPEAALAREAELRYAHCAVVANWAAGMGDGEELSMDEIREHLIHGMEAVRKMIAS LS
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=244, Percent_Identity=36.8852459016393, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI71980569, Length=212, Percent_Identity=38.6792452830189, Blast_Score=136, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6323045, Length=247, Percent_Identity=32.3886639676113, Blast_Score=119, Evalue=5e-28, Organism=Drosophila melanogaster, GI20130079, Length=244, Percent_Identity=37.2950819672131, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI221459247, Length=217, Percent_Identity=35.9447004608295, Blast_Score=142, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 26578; Mature: 26447
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGIIGGTGLTSLEGLEITRREVVRTPFGEPSAPLIHGTFRGHNITFLARHGHSHNIPP CCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC HQVNYRANIWALRHVGVDRVIAVAAVGGLGEAYAPRRIAIPDQIIDYTHSRISTFHDQDL CEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCH EHVTHIDFTYPYDATVREWLLCAARDAGIDAVDGGTYGATQGPRLETAAEIRRMRQDGCD HHHEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCC LVGMTGMPEAALAREAELRYAHCAVVANWAAGMGDGEELSMDEIREHLIHGMEAVRKMIA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SLS HCC >Mature Secondary Structure SVGIIGGTGLTSLEGLEITRREVVRTPFGEPSAPLIHGTFRGHNITFLARHGHSHNIPP CEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC HQVNYRANIWALRHVGVDRVIAVAAVGGLGEAYAPRRIAIPDQIIDYTHSRISTFHDQDL CEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCH EHVTHIDFTYPYDATVREWLLCAARDAGIDAVDGGTYGATQGPRLETAAEIRRMRQDGCD HHHEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCC LVGMTGMPEAALAREAELRYAHCAVVANWAAGMGDGEELSMDEIREHLIHGMEAVRKMIA EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SLS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]