Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is rec2 [H]

Identifier: 121998039

GI number: 121998039

Start: 1355204

End: 1357336

Strand: Reverse

Name: rec2 [H]

Synonym: Hhal_1249

Alternate gene names: 121998039

Gene position: 1357336-1355204 (Counterclockwise)

Preceding gene: 121998041

Following gene: 121998038

Centisome position: 50.68

GC content: 70.32

Gene sequence:

>2133_bases
ATGCGAGCAGGATCGCTTGCCTTCGCGGCCGGAATCGTACTGGTCGTGAGCGTGTTACGGGAGCCCCCCGGGGCCTTCTC
GGTGGCAGCAGTGGCCGCCTCCGGGGTCGTGTGGGGTCTGCTCGCCCCGCGCGGCTGGCGCTGGCCGGCTGCCGGGCTCC
TAGGCTGCGCCTGGGCGCTGCTCAGTGCCTGCTGGCTTTTGGCCCATGAACTTGCCCCTAGCCATGACGGCACCGACGCC
TGCCTGGAAGGGCAGGTCGTTTCCGTCCCTGAGATTGAGAGTCACCGTGCTCGCTTCGAGTTCCGGCCTGACGGCGTGCT
CGATGGCGAGCTGCTGGAGCCATTGCCGCGACGCATCCGCGTGGATTGGTATGGGGCGACGGAGGAGCCAGCGCCGGGGG
AGCGCTGGCAGCTGTGCCTTCGCCTGCGCGCCCCCGATGGATTCCTCAATCCGGAGGGCTTCGATTACCAGCGGTGGCTG
TTCCAACGCCGGATCGGCGCGACGGCCTATGTGCGGGAAGCGGAGCAGGCCGAACGCCTGTCCGGCGGCTGGCGAATCGA
TAGCGTGCGGACTCGGATCGCCGACGCCATGGCCGAGCGGCTCGGCGATTCGCGGTACCTGGGCTTGGTCCAAGGGCTGG
GCGTGGCCGTGCGCGATAGGATCGGCGATGACCAGTGGGAGGTGCTTTCGGTCACCGGGACGGCCCACCTGCTAGCGATC
TCGGGGCTGCATATCGGTCTGGTTGCCGGCCTCGCCGGCACGCTGGCCGGCGGACTCTGGCGTGTGGTTCCGTCGCTGGT
TCGCCGGGTTCCCGCCCTGATTGCCGGCACCCTGGCCGGGGCGCTGGCTGCAGCCGGTTATGCCGCCCTGGCCGGCTTCA
CCCTACCCACTCAGCGCGCGCTGCTCATGGTGCTGGTCTTCGCCGGCGCGCTCCTGCTGCGCCGCCCGTTAAGCCCCTGG
CACAGCCTCGCCGTGGCGGCTGCCGCGGTGCTCGCCCTCGACCCCTGGGCGCCGCTGGGGGCGGGGTTCTGGCTCTCCTT
CGGGGCGGTGGCGATCATCCTGGCAGCTACAACGGGTCGCCCGATGCAGCGCGGTCCCCTACCATGGCTGCGGATCCAGG
TGCTGGTGGGGGTCGGCATGCTACCAGCGACTGCGGTCTGGTTCGGGCACCTGCCGCTTCTCTCGCCGCTGGCCAATCTC
GTAGCCGTGCCCTGGGTCAGCGTATCGGTTGTCCCCCTGATCCTGACCGGAGTCGCGCTCCAGCCCGTGGTGCCAGAGTG
GTCCGGCGGGTTGTGGCAGGGTGCGGATGCCGCCCTCGGGGTGCTGATGCGTGTGCTCAGCGCGCTGGCCGAGTTCCTCG
GTGCCGTTGAGGTGCCCACCCCATCGGTCGGAGCGGTGGCGCTGGCCGCTGTCGGTGTGGCTCTGGTGCTGGCTCCTCGG
GCCGTGCCCGGGCGGTGGCTGGCTGGGCCGTTATTGGCGTTGTTGCTCCTGGGGCCCGGCAGTAGCGGAGGCGGTCCCTC
CGGCCGCGTGGTGGTCTTCGATACCGGCGGAGGTCTGACCGCTCTGGCCTGCGATGGCCGTCAAGCGGTGGTCTACGGCG
GGGGTCCCGGAGGGGGGCTCGACGCGGCGAGCGTTGCTGTCGAGCCGTTTCTCGAAGCCCGGGGGCTGACCCTCAAGGCC
TGGCTGGTGCCGCGCGAGCAGGCCCCCTGGGATGGCGCCGTCGCCGAGGCGCGGCAGCGTTGGGACGATGCCGAGTGGCG
GGGGGCTGGACAGGATACGACGGCCGAGGCGACGGAGTGGTCCCTGGGGCGGCTGACGCTGCAGGAGACGCCCCTCGGCG
ACGAAGAGTGGGGCCTGGATGTCGAGGGAGAGGCGGGTACCGTATCGCTGCGACCGGACCTGGAGAACGACACGAAGGGG
TTGGTTGTCGGCGCCGCCGGATGTGACGAGGACCGCCAGGCGTGCAGTGCGGCGGTTGAGTTGAAGGACGGTCGTTTGTT
GCGTTCGGACGAGCAGGGCGCGCTGACTTTGATCGAAGACGGCGATGCGTGGCGGGTAGACAGTGAGCTGCAGCGCAGGG
GGCGGGTTTACCATCAGGCCAGTCCGGCTGCGTTGGCGCCCGGGATGCTTTAA

Upstream 100 bases:

>100_bases
CGCCTGGGCCGCCGTTCGAACGGATGGGTTGGCATCTTTTGGCCGTTCTCGGCTAGCCTGACCCTAAGACACTTATCCGC
GCACATGCCAAGGATGGCTG

Downstream 100 bases:

>100_bases
AATCCGCCGCCACGCCCACCCGTTCCGGACTGAGCGCCTTGACCGACCCGGGGAGTGATCATGCTTGAGCTCATCCAGGC
CGGTGGCTGGCTGATGATAC

Product: ComEC/Rec2-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 710; Mature: 710

Protein sequence:

>710_residues
MRAGSLAFAAGIVLVVSVLREPPGAFSVAAVAASGVVWGLLAPRGWRWPAAGLLGCAWALLSACWLLAHELAPSHDGTDA
CLEGQVVSVPEIESHRARFEFRPDGVLDGELLEPLPRRIRVDWYGATEEPAPGERWQLCLRLRAPDGFLNPEGFDYQRWL
FQRRIGATAYVREAEQAERLSGGWRIDSVRTRIADAMAERLGDSRYLGLVQGLGVAVRDRIGDDQWEVLSVTGTAHLLAI
SGLHIGLVAGLAGTLAGGLWRVVPSLVRRVPALIAGTLAGALAAAGYAALAGFTLPTQRALLMVLVFAGALLLRRPLSPW
HSLAVAAAAVLALDPWAPLGAGFWLSFGAVAIILAATTGRPMQRGPLPWLRIQVLVGVGMLPATAVWFGHLPLLSPLANL
VAVPWVSVSVVPLILTGVALQPVVPEWSGGLWQGADAALGVLMRVLSALAEFLGAVEVPTPSVGAVALAAVGVALVLAPR
AVPGRWLAGPLLALLLLGPGSSGGGPSGRVVVFDTGGGLTALACDGRQAVVYGGGPGGGLDAASVAVEPFLEARGLTLKA
WLVPREQAPWDGAVAEARQRWDDAEWRGAGQDTTAEATEWSLGRLTLQETPLGDEEWGLDVEGEAGTVSLRPDLENDTKG
LVVGAAGCDEDRQACSAAVELKDGRLLRSDEQGALTLIEDGDAWRVDSELQRRGRVYHQASPAALAPGML

Sequences:

>Translated_710_residues
MRAGSLAFAAGIVLVVSVLREPPGAFSVAAVAASGVVWGLLAPRGWRWPAAGLLGCAWALLSACWLLAHELAPSHDGTDA
CLEGQVVSVPEIESHRARFEFRPDGVLDGELLEPLPRRIRVDWYGATEEPAPGERWQLCLRLRAPDGFLNPEGFDYQRWL
FQRRIGATAYVREAEQAERLSGGWRIDSVRTRIADAMAERLGDSRYLGLVQGLGVAVRDRIGDDQWEVLSVTGTAHLLAI
SGLHIGLVAGLAGTLAGGLWRVVPSLVRRVPALIAGTLAGALAAAGYAALAGFTLPTQRALLMVLVFAGALLLRRPLSPW
HSLAVAAAAVLALDPWAPLGAGFWLSFGAVAIILAATTGRPMQRGPLPWLRIQVLVGVGMLPATAVWFGHLPLLSPLANL
VAVPWVSVSVVPLILTGVALQPVVPEWSGGLWQGADAALGVLMRVLSALAEFLGAVEVPTPSVGAVALAAVGVALVLAPR
AVPGRWLAGPLLALLLLGPGSSGGGPSGRVVVFDTGGGLTALACDGRQAVVYGGGPGGGLDAASVAVEPFLEARGLTLKA
WLVPREQAPWDGAVAEARQRWDDAEWRGAGQDTTAEATEWSLGRLTLQETPLGDEEWGLDVEGEAGTVSLRPDLENDTKG
LVVGAAGCDEDRQACSAAVELKDGRLLRSDEQGALTLIEDGDAWRVDSELQRRGRVYHQASPAALAPGML
>Mature_710_residues
MRAGSLAFAAGIVLVVSVLREPPGAFSVAAVAASGVVWGLLAPRGWRWPAAGLLGCAWALLSACWLLAHELAPSHDGTDA
CLEGQVVSVPEIESHRARFEFRPDGVLDGELLEPLPRRIRVDWYGATEEPAPGERWQLCLRLRAPDGFLNPEGFDYQRWL
FQRRIGATAYVREAEQAERLSGGWRIDSVRTRIADAMAERLGDSRYLGLVQGLGVAVRDRIGDDQWEVLSVTGTAHLLAI
SGLHIGLVAGLAGTLAGGLWRVVPSLVRRVPALIAGTLAGALAAAGYAALAGFTLPTQRALLMVLVFAGALLLRRPLSPW
HSLAVAAAAVLALDPWAPLGAGFWLSFGAVAIILAATTGRPMQRGPLPWLRIQVLVGVGMLPATAVWFGHLPLLSPLANL
VAVPWVSVSVVPLILTGVALQPVVPEWSGGLWQGADAALGVLMRVLSALAEFLGAVEVPTPSVGAVALAAVGVALVLAPR
AVPGRWLAGPLLALLLLGPGSSGGGPSGRVVVFDTGGGLTALACDGRQAVVYGGGPGGGLDAASVAVEPFLEARGLTLKA
WLVPREQAPWDGAVAEARQRWDDAEWRGAGQDTTAEATEWSLGRLTLQETPLGDEEWGLDVEGEAGTVSLRPDLENDTKG
LVVGAAGCDEDRQACSAAVELKDGRLLRSDEQGALTLIEDGDAWRVDSELQRRGRVYHQASPAALAPGML

Specific function: Might contribute to transformation as a member of a membrane-bound pore complex at the base of the transformasome. It could directly interact with transforming DNA during translocation indirectly by participating in the assembly of the pore [H]

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081801, Length=700, Percent_Identity=24.2857142857143, Blast_Score=109, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004477
- InterPro:   IPR004797 [H]

Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 74466; Mature: 74466

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGSLAFAAGIVLVVSVLREPPGAFSVAAVAASGVVWGLLAPRGWRWPAAGLLGCAWAL
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LSACWLLAHELAPSHDGTDACLEGQVVSVPEIESHRARFEFRPDGVLDGELLEPLPRRIR
HHHHHHHHHHHCCCCCCCCHHHCCCEECCCCCCCCCCEEEECCCCCCCCHHHHCCCHHEE
VDWYGATEEPAPGERWQLCLRLRAPDGFLNPEGFDYQRWLFQRRIGATAYVREAEQAERL
EEEECCCCCCCCCHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
SGGWRIDSVRTRIADAMAERLGDSRYLGLVQGLGVAVRDRIGDDQWEVLSVTGTAHLLAI
CCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCEEEEEECCCEEEEEE
SGLHIGLVAGLAGTLAGGLWRVVPSLVRRVPALIAGTLAGALAAAGYAALAGFTLPTQRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLMVLVFAGALLLRRPLSPWHSLAVAAAAVLALDPWAPLGAGFWLSFGAVAIILAATTGR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCC
PMQRGPLPWLRIQVLVGVGMLPATAVWFGHLPLLSPLANLVAVPWVSVSVVPLILTGVAL
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QPVVPEWSGGLWQGADAALGVLMRVLSALAEFLGAVEVPTPSVGAVALAAVGVALVLAPR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
AVPGRWLAGPLLALLLLGPGSSGGGPSGRVVVFDTGGGLTALACDGRQAVVYGGGPGGGL
CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCCC
DAASVAVEPFLEARGLTLKAWLVPREQAPWDGAVAEARQRWDDAEWRGAGQDTTAEATEW
CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SLGRLTLQETPLGDEEWGLDVEGEAGTVSLRPDLENDTKGLVVGAAGCDEDRQACSAAVE
CCCEEEEECCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHE
LKDGRLLRSDEQGALTLIEDGDAWRVDSELQRRGRVYHQASPAALAPGML
ECCCCEEECCCCCCEEEEECCCCEECCHHHHHCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MRAGSLAFAAGIVLVVSVLREPPGAFSVAAVAASGVVWGLLAPRGWRWPAAGLLGCAWAL
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LSACWLLAHELAPSHDGTDACLEGQVVSVPEIESHRARFEFRPDGVLDGELLEPLPRRIR
HHHHHHHHHHHCCCCCCCCHHHCCCEECCCCCCCCCCEEEECCCCCCCCHHHHCCCHHEE
VDWYGATEEPAPGERWQLCLRLRAPDGFLNPEGFDYQRWLFQRRIGATAYVREAEQAERL
EEEECCCCCCCCCHHEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
SGGWRIDSVRTRIADAMAERLGDSRYLGLVQGLGVAVRDRIGDDQWEVLSVTGTAHLLAI
CCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHCCCCCEEEEEECCCEEEEEE
SGLHIGLVAGLAGTLAGGLWRVVPSLVRRVPALIAGTLAGALAAAGYAALAGFTLPTQRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLMVLVFAGALLLRRPLSPWHSLAVAAAAVLALDPWAPLGAGFWLSFGAVAIILAATTGR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCC
PMQRGPLPWLRIQVLVGVGMLPATAVWFGHLPLLSPLANLVAVPWVSVSVVPLILTGVAL
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QPVVPEWSGGLWQGADAALGVLMRVLSALAEFLGAVEVPTPSVGAVALAAVGVALVLAPR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
AVPGRWLAGPLLALLLLGPGSSGGGPSGRVVVFDTGGGLTALACDGRQAVVYGGGPGGGL
CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCCC
DAASVAVEPFLEARGLTLKAWLVPREQAPWDGAVAEARQRWDDAEWRGAGQDTTAEATEW
CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
SLGRLTLQETPLGDEEWGLDVEGEAGTVSLRPDLENDTKGLVVGAAGCDEDRQACSAAVE
CCCEEEEECCCCCCCCCCEEECCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHE
LKDGRLLRSDEQGALTLIEDGDAWRVDSELQRRGRVYHQASPAALAPGML
ECCCCEEECCCCCCEEEEECCCCEECCHHHHHCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8063112; 7542800 [H]