| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is menA [H]
Identifier: 121997963
GI number: 121997963
Start: 1279842
End: 1280780
Strand: Reverse
Name: menA [H]
Synonym: Hhal_1173
Alternate gene names: 121997963
Gene position: 1280780-1279842 (Counterclockwise)
Preceding gene: 121997965
Following gene: 121997962
Centisome position: 47.82
GC content: 69.65
Gene sequence:
>939_bases ATGGATCGGTCGATGACGCAAATGTCCCCGCGCCCGTCCTGGCCGACGATCGTCTGGCACGCGATCCGGCCGCGCACGCT ACCGCTTTCCCTGTCCCCGATCCTCGCGGGGTCCGCTGTGGGGTGGGTAGAGAGCGGCGTCCTGCGCCTCGACGTGACCC TGGTGGCGGCGTTATCGACGGCAGCGATCCAGATCGGGACCAACCTGCAGAACGACGCCGCCGACACCCTGAACCAGACC GACAGCGCCGAGCGCATCGGTCCGGTGCGGGTCACCGAGCGCGGTTGGCTGACTCCGCGGCAGGTCATGGCGGCCGCCTA CGGTGCCTTCGCCCTGGCGCTGTTCTGTGGTCTCTACCTGGTGGCGATCGGCGGCCTGCCCATTCTGGTGCTCGGCATCC TCTCGGTACTGGCCGGATACGCCTACTCCGGCGGCCCGTTCCCGATCTCCCGCGGTCCGCTGGGGGAGTTGTTTGTCATC TTCTTCTTCGGGTTGGTCGCCGTCGGCGGTGTGGTCTACCTGTATACCGGGTCGATCAGTCCACCCGCGCTGGTGATGGG AGTGACCCTCGGGCTGCCGGCCGCAGCCGTGCTGCTGGTCAACAATCTGCGTGATCGCGAGGGCGACCGCGAGGCCGGGC GCGCGACGCTGGCCATCCTGCTCGGACCGGTGGGTTCGGTCTGGTTGTTCGGTGGCCTGCTCGCCGGTGTGGCGCTGGGG CTGCTCGGTATGGTTGCGTTCGGCGTGCCGTGGACCGGCGCCGCCCTGGGGCTGGCTGTGCTGCCCTTCGGGGTAAGGAT CTGGCGCGCGCTGATGGGCGCGGCCAGCGGCGAGGATTACAATCAGTGCCTGGCCCGCACCGGGGTGTTCCAGCTGCTGC TCGCCCTGGTCGCCGGGGCCGGGTTGGTGGTCGGGGCGTATCTGCACGGGGCCGCGTAG
Upstream 100 bases:
>100_bases TCCCGTGTCAGACTGGACCTCTCCCCGCGGACCGGTCACAATCGCCGCATCCCGGCGCGGTTCGCGCTCCGTTCGTTCTT GCTGCTGAACAGGTTCTCGC
Downstream 100 bases:
>100_bases CGGCCCGGCAGGACGCGGCGCCGCGGATTGTTGATAGGGTCCGGGCCAGGCGCTATGGTCCGGCTGATTGCCTGCGCGGC GGTGCCCGCGCCGGTTTCAC
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDRSMTQMSPRPSWPTIVWHAIRPRTLPLSLSPILAGSAVGWVESGVLRLDVTLVAALSTAAIQIGTNLQNDAADTLNQT DSAERIGPVRVTERGWLTPRQVMAAAYGAFALALFCGLYLVAIGGLPILVLGILSVLAGYAYSGGPFPISRGPLGELFVI FFFGLVAVGGVVYLYTGSISPPALVMGVTLGLPAAAVLLVNNLRDREGDREAGRATLAILLGPVGSVWLFGGLLAGVALG LLGMVAFGVPWTGAALGLAVLPFGVRIWRALMGAASGEDYNQCLARTGVFQLLLALVAGAGLVVGAYLHGAA
Sequences:
>Translated_312_residues MDRSMTQMSPRPSWPTIVWHAIRPRTLPLSLSPILAGSAVGWVESGVLRLDVTLVAALSTAAIQIGTNLQNDAADTLNQT DSAERIGPVRVTERGWLTPRQVMAAAYGAFALALFCGLYLVAIGGLPILVLGILSVLAGYAYSGGPFPISRGPLGELFVI FFFGLVAVGGVVYLYTGSISPPALVMGVTLGLPAAAVLLVNNLRDREGDREAGRATLAILLGPVGSVWLFGGLLAGVALG LLGMVAFGVPWTGAALGLAVLPFGVRIWRALMGAASGEDYNQCLARTGVFQLLLALVAGAGLVVGAYLHGAA >Mature_312_residues MDRSMTQMSPRPSWPTIVWHAIRPRTLPLSLSPILAGSAVGWVESGVLRLDVTLVAALSTAAIQIGTNLQNDAADTLNQT DSAERIGPVRVTERGWLTPRQVMAAAYGAFALALFCGLYLVAIGGLPILVLGILSVLAGYAYSGGPFPISRGPLGELFVI FFFGLVAVGGVVYLYTGSISPPALVMGVTLGLPAAAVLLVNNLRDREGDREAGRATLAILLGPVGSVWLFGGLLAGVALG LLGMVAFGVPWTGAALGLAVLPFGVRIWRALMGAASGEDYNQCLARTGVFQLLLALVAGAGLVVGAYLHGAA
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=311, Percent_Identity=29.5819935691318, Blast_Score=89, Evalue=4e-18, Organism=Escherichia coli, GI1790365, Length=253, Percent_Identity=33.9920948616601, Blast_Score=125, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 32231; Mature: 32231
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRSMTQMSPRPSWPTIVWHAIRPRTLPLSLSPILAGSAVGWVESGVLRLDVTLVAALST CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCHHHHHHCCHHEEHHHHHHHHHH AAIQIGTNLQNDAADTLNQTDSAERIGPVRVTERGWLTPRQVMAAAYGAFALALFCGLYL HHHEECCCCCCHHHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAIGGLPILVLGILSVLAGYAYSGGPFPISRGPLGELFVIFFFGLVAVGGVVYLYTGSIS HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCC PPALVMGVTLGLPAAAVLLVNNLRDREGDREAGRATLAILLGPVGSVWLFGGLLAGVALG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLGMVAFGVPWTGAALGLAVLPFGVRIWRALMGAASGEDYNQCLARTGVFQLLLALVAGA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC GLVVGAYLHGAA HHHHHHHHHCCC >Mature Secondary Structure MDRSMTQMSPRPSWPTIVWHAIRPRTLPLSLSPILAGSAVGWVESGVLRLDVTLVAALST CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHCCHHHHHHCCHHEEHHHHHHHHHH AAIQIGTNLQNDAADTLNQTDSAERIGPVRVTERGWLTPRQVMAAAYGAFALALFCGLYL HHHEECCCCCCHHHHHHHCCCCHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAIGGLPILVLGILSVLAGYAYSGGPFPISRGPLGELFVIFFFGLVAVGGVVYLYTGSIS HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCC PPALVMGVTLGLPAAAVLLVNNLRDREGDREAGRATLAILLGPVGSVWLFGGLLAGVALG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLGMVAFGVPWTGAALGLAVLPFGVRIWRALMGAASGEDYNQCLARTGVFQLLLALVAGA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC GLVVGAYLHGAA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]