Click here to switch to the map view.

The map label for this gene is yhhT [H]

Identifier: 121997925

GI number: 121997925

Start: 1232136

End: 1233221

Strand: Reverse

Name: yhhT [H]

Synonym: Hhal_1134

Alternate gene names: 121997925

Gene position: 1233221-1232136 (Counterclockwise)

Preceding gene: 121997926

Following gene: 121997915

Centisome position: 46.04

GC content: 66.76

Gene sequence:

>1086_bases
GTGTGGAGTCGCACCAGCGTTAGGGAAACGGACGTGACCATACTGAACCAGAACGGGGGGCCCTCCACCTGGCATTGGCT
GGTGGGCGGAGCTGCTGTCGTGATCATCCTGGCCGGGCTCCAGGCGGTCTCCGGCATCGTCAATCCACTACTGCTGGCGG
CGTTCCTGGCCATCGCCTCGGCGACGCCGCTGAACTGGATGCAGCGACGCGGCGTGCCCGCGGTCTTGGCGGTGATGATC
CTCTTCCTTGGCGTGGGGCTGCTCTTCTTCCTGCTCTTCCACGCTCTGCGTGGCGCGGTGGAGACCATGGCCACCCAGGC
GCCGGAGTATCAGGAGCAGTTGACCATCGTCTTCGGCCAGCTGCGTGAGTACGTCGTATCCATGGGGGTGCCGCCGGAGA
GCCTCCCCGAGCAGATTCCGCTGCCGGCGGTGGGGACGCTTACCGATGCGGCGGCGACGGTCGCCAGCGGTATCGGTCAG
TTTACGGCGGCCACCTTCCTGGTGCTGCTCGCCTTCATGTTCCTGCTCCTGGAAGAGAGCACGTTGCCCGGCAAACTCTC
GGTCGCCTTCCCCGCCAGCCGTCGGGCGCGGGTGCGTACCCGGCGGTTCCTGCGCGCGGTCGATCGCTACATCTTCATCA
AGAGCGCCACCAGTACCCTGACCGGCGTGATCATCGGTACCGGGTTGTGGCTCATCGGCGTGGATTTCCCGATCCTCTGG
GGGATCTTCGCCGGGCTGCTGAATTTTATCCCCACGGTGGGGTCGATCATCGCCGCCGCCCCTGCGGTGGCGGTGGCCCT
GCTCGGTGGGGGGCTGCTCGATGCGGTGCTGACGGTGGCCCTGTATGTGGCGGTGAACGTGGCCATCGGCAGCATTACCG
AGCCGCGCCTGATGGGGCGCACCCTGGGGCTGTCGCCGCTGGTGGTGCTGATCTCGTTGATGGTCTGGGGGTGGGTGTTC
GGGCCGGTCGGGATGTTGCTGTCGATCCCGCTGACCATGATCGCCAAGCTGGCCCTGGAGGCGCAGCCAGAGACTCGCTG
GATCGCCGTGCTGCTGAGCGACCGCGCCGATGAGCGGATCCGCTGA

Upstream 100 bases:

>100_bases
CCGGGGGATGGCCGCCGGGAAGACTGAGTTGCCCCCTGTGCCCCTGTTACCCTGATCCGGGTTGGCCCGGCGCGGCTTGG
CCGCGCCGGGGCGTATCCGT

Downstream 100 bases:

>100_bases
CAGCGGTTAGACCGCCGCCGGATCGGGTGAGCCGGATCCGGCGGCGGATAGCGGTCGGTCCCAGCGGTCAGCGCCGCGGG
CCGAACTCCTTGCGGAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MWSRTSVRETDVTILNQNGGPSTWHWLVGGAAVVIILAGLQAVSGIVNPLLLAAFLAIASATPLNWMQRRGVPAVLAVMI
LFLGVGLLFFLLFHALRGAVETMATQAPEYQEQLTIVFGQLREYVVSMGVPPESLPEQIPLPAVGTLTDAAATVASGIGQ
FTAATFLVLLAFMFLLLEESTLPGKLSVAFPASRRARVRTRRFLRAVDRYIFIKSATSTLTGVIIGTGLWLIGVDFPILW
GIFAGLLNFIPTVGSIIAAAPAVAVALLGGGLLDAVLTVALYVAVNVAIGSITEPRLMGRTLGLSPLVVLISLMVWGWVF
GPVGMLLSIPLTMIAKLALEAQPETRWIAVLLSDRADERIR

Sequences:

>Translated_361_residues
MWSRTSVRETDVTILNQNGGPSTWHWLVGGAAVVIILAGLQAVSGIVNPLLLAAFLAIASATPLNWMQRRGVPAVLAVMI
LFLGVGLLFFLLFHALRGAVETMATQAPEYQEQLTIVFGQLREYVVSMGVPPESLPEQIPLPAVGTLTDAAATVASGIGQ
FTAATFLVLLAFMFLLLEESTLPGKLSVAFPASRRARVRTRRFLRAVDRYIFIKSATSTLTGVIIGTGLWLIGVDFPILW
GIFAGLLNFIPTVGSIIAAAPAVAVALLGGGLLDAVLTVALYVAVNVAIGSITEPRLMGRTLGLSPLVVLISLMVWGWVF
GPVGMLLSIPLTMIAKLALEAQPETRWIAVLLSDRADERIR
>Mature_361_residues
MWSRTSVRETDVTILNQNGGPSTWHWLVGGAAVVIILAGLQAVSGIVNPLLLAAFLAIASATPLNWMQRRGVPAVLAVMI
LFLGVGLLFFLLFHALRGAVETMATQAPEYQEQLTIVFGQLREYVVSMGVPPESLPEQIPLPAVGTLTDAAATVASGIGQ
FTAATFLVLLAFMFLLLEESTLPGKLSVAFPASRRARVRTRRFLRAVDRYIFIKSATSTLTGVIIGTGLWLIGVDFPILW
GIFAGLLNFIPTVGSIIAAAPAVAVALLGGGLLDAVLTVALYVAVNVAIGSITEPRLMGRTLGLSPLVVLISLMVWGWVF
GPVGMLLSIPLTMIAKLALEAQPETRWIAVLLSDRADERIR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=339, Percent_Identity=34.5132743362832, Blast_Score=187, Evalue=9e-49,
Organism=Escherichia coli, GI1787885, Length=329, Percent_Identity=37.3860182370821, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1788838, Length=339, Percent_Identity=24.4837758112094, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38517; Mature: 38517

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSRTSVRETDVTILNQNGGPSTWHWLVGGAAVVIILAGLQAVSGIVNPLLLAAFLAIAS
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATPLNWMQRRGVPAVLAVMILFLGVGLLFFLLFHALRGAVETMATQAPEYQEQLTIVFGQ
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LREYVVSMGVPPESLPEQIPLPAVGTLTDAAATVASGIGQFTAATFLVLLAFMFLLLEES
HHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLPGKLSVAFPASRRARVRTRRFLRAVDRYIFIKSATSTLTGVIIGTGLWLIGVDFPILW
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHH
GIFAGLLNFIPTVGSIIAAAPAVAVALLGGGLLDAVLTVALYVAVNVAIGSITEPRLMGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TLGLSPLVVLISLMVWGWVFGPVGMLLSIPLTMIAKLALEAQPETRWIAVLLSDRADERI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCC
R
C
>Mature Secondary Structure
MWSRTSVRETDVTILNQNGGPSTWHWLVGGAAVVIILAGLQAVSGIVNPLLLAAFLAIAS
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ATPLNWMQRRGVPAVLAVMILFLGVGLLFFLLFHALRGAVETMATQAPEYQEQLTIVFGQ
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LREYVVSMGVPPESLPEQIPLPAVGTLTDAAATVASGIGQFTAATFLVLLAFMFLLLEES
HHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLPGKLSVAFPASRRARVRTRRFLRAVDRYIFIKSATSTLTGVIIGTGLWLIGVDFPILW
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHH
GIFAGLLNFIPTVGSIIAAAPAVAVALLGGGLLDAVLTVALYVAVNVAIGSITEPRLMGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TLGLSPLVVLISLMVWGWVFGPVGMLLSIPLTMIAKLALEAQPETRWIAVLLSDRADERI
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]