Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

Click here to switch to the map view.

The map label for this gene is 121997808

Identifier: 121997808

GI number: 121997808

Start: 1088580

End: 1090010

Strand: Reverse

Name: 121997808

Synonym: Hhal_1017

Alternate gene names: NA

Gene position: 1090010-1088580 (Counterclockwise)

Preceding gene: 121997809

Following gene: 121997807

Centisome position: 40.7

GC content: 71.21

Gene sequence:

>1431_bases
GTGGGACAGGAGATCGGTCGGGCACGGTTCGGGAGCGATGACTTCAGCGCCTTTCGTCAGCGGCTCCGGGCGGAGACCCG
ATTGCTGGGCGAGTGGTTGCGAGCCGGTCGGGTGGCCGAGGGCCCGCCGAGCATCGGCCTGGAGCTGGAGGCGTGGTTGG
TGGACGCCGACGGCCGTCCGGCCCCGATCAGTGATCGGGTGTTGAGCCGGGTCGAAGACCCTCGGGTTGAGAACGAGCTG
GCCCGGTTTAACCTGGAGATCAACACCGACGTTCACCCGCTGGCCGGAACGCCCCTGCAGGGGCTGCAGACGGAGCTCGC
CGAGCGCTGGGCGCGGACGCAACGGGCCGCGGCCGACGCCGGGTGTCGGTTGGCACTGGTCGGCATCCTCCCTTCGGTGC
GCGAGGCGGATGTCTGCGTCGAGAACATGACGCCCTCGCCCCGCTACGCGGCGTTGAACGAACAGGTCCTGGCGCTGCGC
GGGCGTCGCCCGCTGACCCTCGACATCGAGGGGACGCAGCGCTTTCGCACCGAGCGCCACGACGTCATGCTCGAGGCGGC
CACCACCTCCCTACAGCTGCACCTGCAGGTGCCGCCGCAGCGCATGGCGGCATTCTTCAACGCCGCGGTGGCGTTGTCGG
CCGCTTCGGTGGCGGTGGCGGCCAATTCGCCGTTCCTGTTCGGTCGCCGCCTGTGGCACGAGAGCCGTATCCCGCTGTTC
GAACAGGCGGTGGCGTGCACCCGCCTGGAGCCGCGTGGGGCCGGGACCCTGGCGCGGGTGGGCTTCGGCAGCGGCTACGC
CCGCGACGCCCTGTACGGCTTCTTCGTCGAGAATCGGCAGCACCACCCGGTCTTGTTGCCCGAGTTGCAGGATCAACCGG
TGGAGGCGCTGGCCCATCTGCGCCTGCACAATGGGACCATCTGGCGCTGGAACCGGCCGCTGGTGGAGGTGGTCGACGGG
CAGTGCCAGCTGCGTCTGGAGCACCGGGTGATGGCGGCCGGTCCGACCCTGGCCGACGTGCTGGCCAACGCCGCCTTCTT
CTATGGCGCCGTGGCCGAGCTGGCTGAGTCGCGCCCGGGGCTGGTCGAGGAACTGCCTTTCCACATCGCCGAGCAGAACT
TCTACGCCGCGGCCCGTTACGGTCTGGAGGCCGAGGTCGAGTGGCTGGATGGCTGGTTCGGCCGGCTGGGCGATCTCGTT
ACCGAACGCCTGCTGCCCAAGGCCCGCCGCGGGCTGGTACGGGCCGGGGTGGCGGAGGCGGAAGCCACGGCGCACCTGGG
CGTGCTGGAGGAGCGGGTTGCCAGCGGTCGGACGGGCGCGGCCTGGCAGCTGGCCTGGGTGGAGCGCCACGGTGAGGACG
ACCAGGCGCTGACCCGGGCCTACCTGGATCGGGCCGCCGACGGCGAGCCGGTCCACCGCTGGCCGCTGTAG

Upstream 100 bases:

>100_bases
GGGCCTGGTCCGATATCGGGACCCCGGAGCGGCTCGAGCAACTGCGCCGCGAGGTGGCCACCGGCGCCGCACCGGTGCCG
GAGTAACGCGGGGGGGCGAC

Downstream 100 bases:

>100_bases
ACACCGATCAGGAGGCAAGAACGGCCCATGCTCAAGACCTACCAGGGACTGCCGAAGGGCCTGCTCGGCGCGGCGGCCCC
GGAACTGGAGGACCGGCTCG

Product: glutamate--cysteine ligase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MGQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRPAPISDRVLSRVEDPRVENEL
ARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADAGCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALR
GRRPLTLDIEGTQRFRTERHDVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF
EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHLRLHNGTIWRWNRPLVEVVDG
QCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPGLVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLV
TERLLPKARRGLVRAGVAEAEATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL

Sequences:

>Translated_476_residues
MGQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRPAPISDRVLSRVEDPRVENEL
ARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADAGCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALR
GRRPLTLDIEGTQRFRTERHDVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF
EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHLRLHNGTIWRWNRPLVEVVDG
QCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPGLVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLV
TERLLPKARRGLVRAGVAEAEATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL
>Mature_475_residues
GQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRPAPISDRVLSRVEDPRVENELA
RFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADAGCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALRG
RRPLTLDIEGTQRFRTERHDVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLFE
QAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHLRLHNGTIWRWNRPLVEVVDGQ
CQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPGLVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLVT
ERLLPKARRGLVRAGVAEAEATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52747; Mature: 52616

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCC
APISDRVLSRVEDPRVENELARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADA
CCCHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALRGRRPLTLDIEGTQRFRTERH
CCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHCHHHHHHCCCCCEEEEECCHHHHHHHHH
DVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF
HEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCHH
EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHL
HHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHH
RLHNGTIWRWNRPLVEVVDGQCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPG
HHCCCEEEEECCCHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
LVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLVTERLLPKARRGLVRAGVAEA
HHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL
HHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GQEIGRARFGSDDFSAFRQRLRAETRLLGEWLRAGRVAEGPPSIGLELEAWLVDADGRP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCC
APISDRVLSRVEDPRVENELARFNLEINTDVHPLAGTPLQGLQTELAERWARTQRAAADA
CCCHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
GCRLALVGILPSVREADVCVENMTPSPRYAALNEQVLALRGRRPLTLDIEGTQRFRTERH
CCEEEEEECCCCCHHHHHHHHCCCCCCCHHHHCHHHHHHCCCCCEEEEECCHHHHHHHHH
DVMLEAATTSLQLHLQVPPQRMAAFFNAAVALSAASVAVAANSPFLFGRRLWHESRIPLF
HEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCHH
EQAVACTRLEPRGAGTLARVGFGSGYARDALYGFFVENRQHHPVLLPELQDQPVEALAHL
HHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHH
RLHNGTIWRWNRPLVEVVDGQCQLRLEHRVMAAGPTLADVLANAAFFYGAVAELAESRPG
HHCCCEEEEECCCHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
LVEELPFHIAEQNFYAAARYGLEAEVEWLDGWFGRLGDLVTERLLPKARRGLVRAGVAEA
HHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EATAHLGVLEERVASGRTGAAWQLAWVERHGEDDQALTRAYLDRAADGEPVHRWPL
HHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA