| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is ubiE [C]
Identifier: 121997775
GI number: 121997775
Start: 1057036
End: 1057938
Strand: Reverse
Name: ubiE [C]
Synonym: Hhal_0984
Alternate gene names: 121997775
Gene position: 1057938-1057036 (Counterclockwise)
Preceding gene: 121997777
Following gene: 121997774
Centisome position: 39.5
GC content: 69.88
Gene sequence:
>903_bases ATGCCCCCAGTACCCACTTCACCGGATCGCCGCGGCACTGGCGGTCGTGCCCTCAGCTATCTCGACTGGTTGTTCAATCC GTTTCAGCGGCGTGACGCCCAGGCGGTCTACGATCTGCTGGGTACCGGCGCCATCACCGCCGAAGGTCTCTACCTCAACC TGGGCTACTGGACCGGGGAAGAAGACCTGGACGCGGCCAGCGCGGCGCTGGCGCGGCTGGTCGCCGATACGGCCGGCATG GGTCCCGAGGATACGGTGCTCGATGTCGGGTTCGGCTTCGCCGATCAGGATCTGCTCTGGGCGCGGATCCACCAGCCGCA GCGGATCATCGGCCTGAATATCACCGCCTCCCAGGTGGCAGTGGCCCGCGAGCGCCTAGCCGAGGTCGGGCTGGAGGGGC AGATCGAGCTCCACGAGGGATCGGCCACCGCCATGCCGCTGGAGGACGCCTCGGTCGACTGCGTGGTGGCCCTGGAGTCC GCCTTCCACTTCCAGACCCGGGCCGAGTTCTTCGCCGAGGCCTACCGGGTCCTGCGCCCCGGTGGTCGCCTGGTCACCGC GGACATCGTGCCGCTGCCGCGCGCCGCCCGGGTTGCCGAGCGACTGCGCCAGCGCCTGTCGTGGTGGCTGGTCGCCAGTC GTTTTGCCATCCCCGAGGCCAACCGCTACACCCGGCTCGCCTATCCGGGGTATCTGACCGCGGCCGGGTTTGTGGACGTG CACGTGCGTTCGATCCGCGAGGACGTCTATGCGCCGCTGCACGCCTGGCTGCAGGCCCACCCGGAGACCCTCGAGCGGCT CCATCCGATGGCCCGTCTGCCGGCCCGCTGGGCGCGGCGTATGGAGGCTGAGCGGCTCTACGCCGGGCTGGACTACATCC TAGCCCGGGCCGTCCGCCCTTAG
Upstream 100 bases:
>100_bases GGGTGTTCGTCGCTAAGCTAATCCCTTACTGAAACTGGGGCGCTAAGGGCTGCTCATCTCCTTAAGATGAGTCCTGTATC CACCCGTCCGTGAGCCCCGT
Downstream 100 bases:
>100_bases GGCCGGGCGATGGGCGAGGCACTTCGACGCCGACCCTAGTCCAGGCCGCGCCTGAATCGGCTATCATGCCCCGATGACCA TGGGAACGCACGACGAGGAC
Product: type 11 methyltransferase
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: Methyltransferase; Arsenite S-Adenosylmethyltransferase; UbiE/COQ5 Family Methlytransferase; Gamma-copherol Methyltransferase; Erythromycin C Methlytransferase; McyJ Protein; Methlytransferase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPPVPTSPDRRGTGGRALSYLDWLFNPFQRRDAQAVYDLLGTGAITAEGLYLNLGYWTGEEDLDAASAALARLVADTAGM GPEDTVLDVGFGFADQDLLWARIHQPQRIIGLNITASQVAVARERLAEVGLEGQIELHEGSATAMPLEDASVDCVVALES AFHFQTRAEFFAEAYRVLRPGGRLVTADIVPLPRAARVAERLRQRLSWWLVASRFAIPEANRYTRLAYPGYLTAAGFVDV HVRSIREDVYAPLHAWLQAHPETLERLHPMARLPARWARRMEAERLYAGLDYILARAVRP
Sequences:
>Translated_300_residues MPPVPTSPDRRGTGGRALSYLDWLFNPFQRRDAQAVYDLLGTGAITAEGLYLNLGYWTGEEDLDAASAALARLVADTAGM GPEDTVLDVGFGFADQDLLWARIHQPQRIIGLNITASQVAVARERLAEVGLEGQIELHEGSATAMPLEDASVDCVVALES AFHFQTRAEFFAEAYRVLRPGGRLVTADIVPLPRAARVAERLRQRLSWWLVASRFAIPEANRYTRLAYPGYLTAAGFVDV HVRSIREDVYAPLHAWLQAHPETLERLHPMARLPARWARRMEAERLYAGLDYILARAVRP >Mature_299_residues PPVPTSPDRRGTGGRALSYLDWLFNPFQRRDAQAVYDLLGTGAITAEGLYLNLGYWTGEEDLDAASAALARLVADTAGMG PEDTVLDVGFGFADQDLLWARIHQPQRIIGLNITASQVAVARERLAEVGLEGQIELHEGSATAMPLEDASVDCVVALESA FHFQTRAEFFAEAYRVLRPGGRLVTADIVPLPRAARVAERLRQRLSWWLVASRFAIPEANRYTRLAYPGYLTAAGFVDVH VRSIREDVYAPLHAWLQAHPETLERLHPMARLPARWARRMEAERLYAGLDYILARAVRP
Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994983, Length=130, Percent_Identity=28.4615384615385, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.- [C]
Molecular weight: Translated: 33371; Mature: 33240
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVPTSPDRRGTGGRALSYLDWLFNPFQRRDAQAVYDLLGTGAITAEGLYLNLGYWTGE CCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCEEEEEEEECCC EDLDAASAALARLVADTAGMGPEDTVLDVGFGFADQDLLWARIHQPQRIIGLNITASQVA HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCHHHHHH VARERLAEVGLEGQIELHEGSATAMPLEDASVDCVVALESAFHFQTRAEFFAEAYRVLRP HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC GGRLVTADIVPLPRAARVAERLRQRLSWWLVASRFAIPEANRYTRLAYPGYLTAAGFVDV CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH HVRSIREDVYAPLHAWLQAHPETLERLHPMARLPARWARRMEAERLYAGLDYILARAVRP HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPVPTSPDRRGTGGRALSYLDWLFNPFQRRDAQAVYDLLGTGAITAEGLYLNLGYWTGE CCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCEEEEEEEECCC EDLDAASAALARLVADTAGMGPEDTVLDVGFGFADQDLLWARIHQPQRIIGLNITASQVA HHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCHHHHHH VARERLAEVGLEGQIELHEGSATAMPLEDASVDCVVALESAFHFQTRAEFFAEAYRVLRP HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC GGRLVTADIVPLPRAARVAERLRQRLSWWLVASRFAIPEANRYTRLAYPGYLTAAGFVDV CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH HVRSIREDVYAPLHAWLQAHPETLERLHPMARLPARWARRMEAERLYAGLDYILARAVRP HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA