| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is pgpA [H]
Identifier: 121997685
GI number: 121997685
Start: 971356
End: 971856
Strand: Reverse
Name: pgpA [H]
Synonym: Hhal_0894
Alternate gene names: 121997685
Gene position: 971856-971356 (Counterclockwise)
Preceding gene: 121997686
Following gene: 121997684
Centisome position: 36.28
GC content: 72.46
Gene sequence:
>501_bases GTGAGCACCCCGTTCCGGTTGCGTCGGCCGCTGCACTGGCTGGCCACCGGCGGGGGTCTCGGTCTGGCCCCGCGGGCGCC GGGGACGTTCGGTACGTTGGCGGCGCTGCCGCTGTTCGCGCTGCTCTATCCCGCGCCGTTGGCCGTCTACCTGCTGGCCA CCCTGGCGGTGGTGGTCGGCGGTATCTGGATCTGCGGCCGGGCCGCCGACGAGGTCGGCGTCCACGATCACCCGGCCATC GTCTGGGACGAGGTCGGCGGTTACCTGGTCGCGGCGCTGCCGCTGGTGACCGGCTTCGGGGTCTTCTCCGTGTGGCTGGA CGCCGCGCTGCTGTTCCTGCTCTTCCGCTTCTTCGACGCCGTTAAGCCCGGCCCCATCCGCTGGCTCGATCGGCATCTGC ACGGCGGCCTGGGGATCATGGCCGACGACGTCGCGGCCGGGGCTGCAGCGGCGGCGGTGTGGTACGCCAGCGTCGTGCTG TTGACCCCGCTGGCCGGATGA
Upstream 100 bases:
>100_bases TCGGCACCGTGGAGGAGACCCCCGGGCTGCGCGGGGTGGACGCCGGCGGCGTGGTCTGCGCCCTGGAGCCGGGTGGCTAC GACCACTTCGCGGAGGGGTC
Downstream 100 bases:
>100_bases TCGAGCCGTTGGGCGTGTTGCAGTGCCAAAGCTAGAATGTCCAGAAACCAGTCCCGTGAAGCGAGGCCAAACCGCGAGGT GGCGCAGACGGTGAGCGAGC
Product: phosphatidylglycerophosphatase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSTPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVGGIWICGRAADEVGVHDHPAI VWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDAVKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVL LTPLAG
Sequences:
>Translated_166_residues MSTPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVGGIWICGRAADEVGVHDHPAI VWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDAVKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVL LTPLAG >Mature_165_residues STPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVGGIWICGRAADEVGVHDHPAIV WDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDAVKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVLL TPLAG
Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=154, Percent_Identity=40.9090909090909, Blast_Score=122, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 17406; Mature: 17275
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVG CCCCHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIWICGRAADEVGVHDHPAIVWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDA HHHHCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVLLTPLAG CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVG CCCHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIWICGRAADEVGVHDHPAIVWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDA HHHHCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVLLTPLAG CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2846510; 9278503 [H]