Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is pgpA [H]

Identifier: 121997685

GI number: 121997685

Start: 971356

End: 971856

Strand: Reverse

Name: pgpA [H]

Synonym: Hhal_0894

Alternate gene names: 121997685

Gene position: 971856-971356 (Counterclockwise)

Preceding gene: 121997686

Following gene: 121997684

Centisome position: 36.28

GC content: 72.46

Gene sequence:

>501_bases
GTGAGCACCCCGTTCCGGTTGCGTCGGCCGCTGCACTGGCTGGCCACCGGCGGGGGTCTCGGTCTGGCCCCGCGGGCGCC
GGGGACGTTCGGTACGTTGGCGGCGCTGCCGCTGTTCGCGCTGCTCTATCCCGCGCCGTTGGCCGTCTACCTGCTGGCCA
CCCTGGCGGTGGTGGTCGGCGGTATCTGGATCTGCGGCCGGGCCGCCGACGAGGTCGGCGTCCACGATCACCCGGCCATC
GTCTGGGACGAGGTCGGCGGTTACCTGGTCGCGGCGCTGCCGCTGGTGACCGGCTTCGGGGTCTTCTCCGTGTGGCTGGA
CGCCGCGCTGCTGTTCCTGCTCTTCCGCTTCTTCGACGCCGTTAAGCCCGGCCCCATCCGCTGGCTCGATCGGCATCTGC
ACGGCGGCCTGGGGATCATGGCCGACGACGTCGCGGCCGGGGCTGCAGCGGCGGCGGTGTGGTACGCCAGCGTCGTGCTG
TTGACCCCGCTGGCCGGATGA

Upstream 100 bases:

>100_bases
TCGGCACCGTGGAGGAGACCCCCGGGCTGCGCGGGGTGGACGCCGGCGGCGTGGTCTGCGCCCTGGAGCCGGGTGGCTAC
GACCACTTCGCGGAGGGGTC

Downstream 100 bases:

>100_bases
TCGAGCCGTTGGGCGTGTTGCAGTGCCAAAGCTAGAATGTCCAGAAACCAGTCCCGTGAAGCGAGGCCAAACCGCGAGGT
GGCGCAGACGGTGAGCGAGC

Product: phosphatidylglycerophosphatase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSTPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVGGIWICGRAADEVGVHDHPAI
VWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDAVKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVL
LTPLAG

Sequences:

>Translated_166_residues
MSTPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVGGIWICGRAADEVGVHDHPAI
VWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDAVKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVL
LTPLAG
>Mature_165_residues
STPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVGGIWICGRAADEVGVHDHPAIV
WDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDAVKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVLL
TPLAG

Specific function: One of the three phospholipid phosphatases, specifically hydrolyzes phosphatidylglycerophosphate [H]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786620, Length=154, Percent_Identity=40.9090909090909, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 17406; Mature: 17275

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVG
CCCCHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWICGRAADEVGVHDHPAIVWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDA
HHHHCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVLLTPLAG
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STPFRLRRPLHWLATGGGLGLAPRAPGTFGTLAALPLFALLYPAPLAVYLLATLAVVVG
CCCHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIWICGRAADEVGVHDHPAIVWDEVGGYLVAALPLVTGFGVFSVWLDAALLFLLFRFFDA
HHHHCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKPGPIRWLDRHLHGGLGIMADDVAAGAAAAAVWYASVVLLTPLAG
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2846510; 9278503 [H]