| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is erpA
Identifier: 121997670
GI number: 121997670
Start: 958205
End: 958576
Strand: Reverse
Name: erpA
Synonym: Hhal_0879
Alternate gene names: 121997670
Gene position: 958576-958205 (Counterclockwise)
Preceding gene: 121997671
Following gene: 121997667
Centisome position: 35.79
GC content: 64.25
Gene sequence:
>372_bases ATGAGCGATATCGCCGAGCCCGAGACCCACGCCCCGGCCGATGATCAGCTGCTGATCTTCACCGACGCCGCTGCGGACAA GGTCCGCGAGCTGCTCGACGGCGAGGAGGGGGGCGACGTCAAGTTGCGCGTCTTCATCACCGGCGGTGGCTGTTCCGGTT TCCAGTACGGCTTCACCTTCGACGAGACCGTCGAAGAGGGCGACACCATTATCGAGAAGCGCGGGGTCAAGATCGTCGTC GATCCGGTCAGCGGCATCTACCTGCAGGGGGCTGAGGTCGACTTCTCCAGCGGTCTCGAGGGCGAGCAGTTCATCATCCG CAATCCCAACGCCACCACCACCTGCGGCTGCGGCTCGTCCTTCGCCATCTAG
Upstream 100 bases:
>100_bases GGTCGTCGTCGGTTTGACCTGGCCGGTAGGTGCCGACAGAATGCATGTTATCCGCCGTGGGCCAGGTCGGCCCCGGTGTC CATCTGCGGAGGGATAAGCC
Downstream 100 bases:
>100_bases GCGGCGCCCGAGGCGGGGTTACGGTGCGTAGACCCCGCCCAGGACCGCCCTGCGTCGGGCTCCGGTGACCGACGGCAGGT TGCCGGGGTGGTGGTGCAGC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSDIAEPETHAPADDQLLIFTDAAADKVRELLDGEEGGDVKLRVFITGGGCSGFQYGFTFDETVEEGDTIIEKRGVKIVV DPVSGIYLQGAEVDFSSGLEGEQFIIRNPNATTTCGCGSSFAI
Sequences:
>Translated_123_residues MSDIAEPETHAPADDQLLIFTDAAADKVRELLDGEEGGDVKLRVFITGGGCSGFQYGFTFDETVEEGDTIIEKRGVKIVV DPVSGIYLQGAEVDFSSGLEGEQFIIRNPNATTTCGCGSSFAI >Mature_122_residues SDIAEPETHAPADDQLLIFTDAAADKVRELLDGEEGGDVKLRVFITGGGCSGFQYGFTFDETVEEGDTIIEKRGVKIVVD PVSGIYLQGAEVDFSSGLEGEQFIIRNPNATTTCGCGSSFAI
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family
Homologues:
Organism=Homo sapiens, GI160420328, Length=105, Percent_Identity=40.9523809523809, Blast_Score=84, Evalue=3e-17, Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=30.188679245283, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=65.0943396226415, Blast_Score=146, Evalue=5e-37, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=35.8490566037736, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1787974, Length=108, Percent_Identity=34.2592592592593, Blast_Score=61, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71998452, Length=125, Percent_Identity=36.8, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=31.1320754716981, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=31.1320754716981, Blast_Score=73, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323001, Length=107, Percent_Identity=32.7102803738318, Blast_Score=65, Evalue=2e-12, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=46.9879518072289, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=32.0754716981132, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ERPA_HALHL (A1WVE3)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001002457.1 - ProteinModelPortal: A1WVE3 - SMR: A1WVE3 - STRING: A1WVE3 - GeneID: 4710266 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_0879 - eggNOG: COG0316 - HOGENOM: HBG730174 - OMA: TFDDQIN - PhylomeDB: A1WVE3 - ProtClustDB: PRK13623 - BioCyc: HHAL349124:HHAL_0879-MONOMER - HAMAP: MF_01380 - InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 - Gene3D: G3DSA:2.60.300.12 - PANTHER: PTHR10072 - TIGRFAMs: TIGR00049
Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like
EC number: NA
Molecular weight: Translated: 13070; Mature: 12938
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIAEPETHAPADDQLLIFTDAAADKVRELLDGEEGGDVKLRVFITGGGCSGFQYGFTF CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCC DETVEEGDTIIEKRGVKIVVDPVSGIYLQGAEVDFSSGLEGEQFIIRNPNATTTCGCGSS HHHHHCCCCEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCC FAI CCC >Mature Secondary Structure SDIAEPETHAPADDQLLIFTDAAADKVRELLDGEEGGDVKLRVFITGGGCSGFQYGFTF CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCC DETVEEGDTIIEKRGVKIVVDPVSGIYLQGAEVDFSSGLEGEQFIIRNPNATTTCGCGSS HHHHHCCCCEEECCCCEEEEECCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCC FAI CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA