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The map label for this gene is nusG [H]

Identifier: 121997661

GI number: 121997661

Start: 943520

End: 944053

Strand: Reverse

Name: nusG [H]

Synonym: Hhal_0870

Alternate gene names: 121997661

Gene position: 944053-943520 (Counterclockwise)

Preceding gene: 121997662

Following gene: 121997660

Centisome position: 35.25

GC content: 64.04

Gene sequence:

>534_bases
ATGGCACTGCGCTGGTACGTAATCCACGCCTATTCGGGCTTCGAGAAGCAGGTTCAGCGTTCCCTTCAGGAGCGCATCCG
GCGCGCTGGCATGGAAGACAAGTTCGGCGAGATCCTCGTGCCCACCGAGGAGGTCGTCGAGATGCGCGAGGGGCAGAAGC
GCAAGAGCGAGCGCAAGTTCTTCCCCGGCTACGTCCTCGTGCAGATGGAGCTCGACGACGATACCTGGCACCTGGTCAAA
GAGGTCCCGCGGGTGATGGGGTTCATCGGTGGTCGTCCGGACCGCCCGGCTCCCATCTCGGATCGCGAGGCCGAGCAGAT
CCTCAGCCGGGTCCGCGAGGGCGCCGAGAAGCCGCGGCCCAAGGTCCTGTTTGAGGTCGGTGAGATCGTGCGGGTCACCG
ACGGCCCGTTTACCGACTTCAACGGCGCGGTGGAAGAGGTCAACTACGAGAAGAGCCGTCTGCGCGTGGCAGTGCTCATC
TTCGGCCGCTCCACGCCCGTCGAGCTCGAGTTCAGCCAGGTCGAAAAAACGTAA

Upstream 100 bases:

>100_bases
TGTTGCCGCGGTGGTGATTATTGTGGCCATCTTCCTCTGGCTGATGGACCTGCTGCTGCTTTGGCTGGTCGGCATGATCA
CCGGCCACGGAGGCTGACGC

Downstream 100 bases:

>100_bases
CCGCGGCGCGCCGTCCGGCGCGTCTCACCCCACGGGGAGCCCTCATCCGGCGTTCGCACCCGTGACAGGAGCACGTAAGC
ATGGCGAAGAAGATCGAAGC

Product: NusG antitermination factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MALRWYVIHAYSGFEKQVQRSLQERIRRAGMEDKFGEILVPTEEVVEMREGQKRKSERKFFPGYVLVQMELDDDTWHLVK
EVPRVMGFIGGRPDRPAPISDREAEQILSRVREGAEKPRPKVLFEVGEIVRVTDGPFTDFNGAVEEVNYEKSRLRVAVLI
FGRSTPVELEFSQVEKT

Sequences:

>Translated_177_residues
MALRWYVIHAYSGFEKQVQRSLQERIRRAGMEDKFGEILVPTEEVVEMREGQKRKSERKFFPGYVLVQMELDDDTWHLVK
EVPRVMGFIGGRPDRPAPISDREAEQILSRVREGAEKPRPKVLFEVGEIVRVTDGPFTDFNGAVEEVNYEKSRLRVAVLI
FGRSTPVELEFSQVEKT
>Mature_176_residues
ALRWYVIHAYSGFEKQVQRSLQERIRRAGMEDKFGEILVPTEEVVEMREGQKRKSERKFFPGYVLVQMELDDDTWHLVKE
VPRVMGFIGGRPDRPAPISDREAEQILSRVREGAEKPRPKVLFEVGEIVRVTDGPFTDFNGAVEEVNYEKSRLRVAVLIF
GRSTPVELEFSQVEKT

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=174, Percent_Identity=69.5402298850575, Blast_Score=258, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20527; Mature: 20396

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRWYVIHAYSGFEKQVQRSLQERIRRAGMEDKFGEILVPTEEVVEMREGQKRKSERKF
CCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCC
FPGYVLVQMELDDDTWHLVKEVPRVMGFIGGRPDRPAPISDREAEQILSRVREGAEKPRP
CCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
KVLFEVGEIVRVTDGPFTDFNGAVEEVNYEKSRLRVAVLIFGRSTPVELEFSQVEKT
HHHEECCCEEEECCCCCCCCCCHHHHCCCCHHHEEEEEEEECCCCCCEEEHHCCCCC
>Mature Secondary Structure 
ALRWYVIHAYSGFEKQVQRSLQERIRRAGMEDKFGEILVPTEEVVEMREGQKRKSERKF
CEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCC
FPGYVLVQMELDDDTWHLVKEVPRVMGFIGGRPDRPAPISDREAEQILSRVREGAEKPRP
CCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
KVLFEVGEIVRVTDGPFTDFNGAVEEVNYEKSRLRVAVLIFGRSTPVELEFSQVEKT
HHHEECCCEEEECCCCCCCCCCHHHHCCCCHHHEEEEEEEECCCCCCEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]