| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is rpoB
Identifier: 121997656
GI number: 121997656
Start: 936689
End: 940834
Strand: Reverse
Name: rpoB
Synonym: Hhal_0865
Alternate gene names: 121997656
Gene position: 940834-936689 (Counterclockwise)
Preceding gene: 121997657
Following gene: 121997655
Centisome position: 35.13
GC content: 67.2
Gene sequence:
>4146_bases ATGGCCTATTCGTTCACCGAGAAGAAGCGCATCCGCAAGGACTTCGGGAAGCTCCCGAACATCCTCGATGTCCCCTACCT GCTGGCGACCCAGGTCGACTCGTACCGGCAATTCCTGCAGGACGAGGTCAGCGAAGACGCGCGCGACACCGAGGTAGGCC TCGAGGGCGCGTTCCGGTCGGTCTTCCCGATCCAGAGCCACTCCGGGAATGCCGAGCTGCAGTACGTCTCGTACCGCATC GGTGATCCGCCGTTCGAGGTCAAGGAGTGCCAGAGCCGGGGCCTGACCTACGCCGCGCCGCTGCGCATGCTGGTGCGCCT GGCGCTGTACGACAAGGAAGGCGGCGGCGTGAAGGACATCAAGGAGCAGGAGGTCTACATGGGGGAGATGCCCCTGATGA CCTCCACCGGGACCTTCGTGGTCAACGGTACCGAGCGCGTGATCGTCAACCAGCTGCACCGCTCGCCGGGTGTCTTCTTC GACCACGACAAGGGCAAGAGCCACTCCTCCGGCAAGCTGCTCTTCTCGGCGCGGGTGATCCCGTACCGCGGCTCCTGGCT CGACTTCGAGTTCGATCCCAAGGACACCATCTACGTGCGCATCGACCGGCGCCGCAAGCTGCCGGCGACGATCCTGCTGC GCGCCCTCGGTTATACCCCCGAGGAGATCCTCTACGCCTTCTTCGACACCGACCGCTTCCACCTAGGCAGCGGCAACAAG GTCGTGCTCGACCTGGTGCCCGAGCGCCTGCGCGGCGAGACCGCCAGCTTCGACATCGTCGCCGGCGGCGAGACCATCGT CGAGGCCGGGCGCCGGGTCACCGCGCGCCACGTCAAGCAGCTGCAGAAGTCGGGCGTCGAGCAGCTCGAGGTGCCCGAGG ACTACCTCACCGGCAAGATCATCGCCCACGACGTGATCGACCCGGCTACCGGCGAGATCCTGGCCGAGGCCAACACCACG CTGACACCGGAGATCACCCAGTCGCTGTTCGACGCCGGCATCCGCGAGATCGAAACCCTGTTCGTCAACGATCTCGACCG CGGCCCGTACATGTCCACCACCCTGGCCGCCGACGCCACGCGCAGCCAGATGGAGGCGCTGGTCGAAATCTACCGCATGA TGCGTCCCGGCGAGCCGCCGACCAAGGACGCCGCGGAGAACCTCTTCCACACCCTGTTCTTCACCAGCGACCGCTACGAC CTGTCGCCGGTGGGGCGGATGAAGTTCAACCTGCGGGTTGGCCGCGACGAGGTGCGGGGTCCGGGCATCCTCTATGACGG CAAGTACTTCGCCGGCCTGGGCAACGCCGACAAAGAGGCGGACGATCTCATCGAGCAGTACGGTGAGAGCTCCGACATCC TCGACGTGCTCCGCGAGCTCATCGACATCCGCAACGGCAACGGCCAGGTGGACGACATCGACCACCTCGGCAACCGTCGC GTGCGTTCGGTGGGCGAGATGGCCGAGAACGTCTTCCGCGTCGGCCTGGTCCGGGTCGAGCGCGCGGTCAAGGAGCGCCT GTCGCTGGCCGAGAGCGAGGGGCTGATGCCCCAGGAGCTGATCAACGCCAAGCCGGTGGCCGCAGCCATCAAGGAGTTCT TCGGCTCCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTCTCCGAGGTCACCCACAAGCGGCGGATCTCGGCG CTGGGTCCGGGCGGCCTGACCCGCGAGCGGGCCGGCTTCGAGGTCCGCGACGTGCACCCGACCCACTACGGCCGGGTCTG CCCGATCGAGACGCCGGAGGGGCCGAATATCGGCCTGATCAACTCCCTGGCCGTCTACGCCCGGGCCAACCGCTACGGCT TTCTGGAGACCGCCTACCGCAAGGTGGTCGACGGCCAGGTCACCGACCAGGTCGAGTACCTGTCGGCGATCGAGGAGTCG CGTTATGTCATCGCTCAGGCCAACGCCCGGGTCGATGAGAGCGGCTACCTGGCCGACGACCTGATCTCCTGCCGGCACCA GAACGAGTTCACTATGGCGACGGCGGACCGCGTCCAGTACATGGACGTCTCGCCGCGGCAGATCGTCTCGGTGGCCGCCT CGCTGGTGCCGTTCCTCGAGCACGACGACGCCAACCGCGCCCTGATGGGGGCGAACATGCAGCGCCAGGCGGTGCCGACG CTGCGCGCCGACAAGCCCCTGGTGGGCACCGGCATGGAGCGCACCGTGGCCCGCGACTCCGGCGTCATCGTCACCGCCGA GCGTGGCGGCGTGGTCGAGCAAGTCGACTCGGGCCGGATCGTCGTGCGGGTGGATGATGAAGAGACCACCCCGGGCGAGC CGGGCGTCGACATCTACAGCCTGACCAAGTACACCCGCTCCAACCAGAACACCTGCTTCAGCCAGAAGCCGCTGGTGCAT GTCGGGGACCGCGTGGCCCGGGGCGACGCCCTGGCCGACGGGCCGTCGACGGACATGGGCGAGCTGGCCCTGGGCCAGAA CATGCTGGTCGCTTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTCATCTCCGAGAAGCTGGTCAAGGAGG ATCGCTACACCTCCGTCCACATCGAGGAGCTGACCTGCGTCGCCCGGGACACCAAGCTCGGCAGCGAGGAGATCACCTCG GACATCCCCAACGTCTCCGAGTCGGCGCTCTCCCGCCTCGACGAGTCGGGCATCGTCTACATCGGTGCCGAGGTCAAGGC CGGTGACATCCTCGTCGGCAAGGTCACGCCCAAGGGCGAGACCCAGCTCACGCCGGAGGAGAAGCTGCTGCGGGCGATCT TCGGCGAGAAGGCGTCCGACGTGAAGGACACCTCGCTGCGGGTGCCCACCGGCATGGACGGTACCGTCATCGACGTCCAG GTCTTCACCCGCGACGGCGTCGAGAAGGACGAGCGGGCCCGCGCCATCGAGCGCGAGGAGATCGCCCGGGTGCGCAAGGA CCTGGACGACGAGGCACGCATCTTCGAGGACGACGCCTACGCCCGCCTCGAGAAGCTGCTCGTCGGCAAGGTCGCCGAGG GTGGTCCCAAGGGGCTCGGCAGCGGTGCCGAGGTCACCGAGGCGTACCTGCAGGACCTGCCGCGGGAGCGCTGGTTCGAG ATCCGCATGCGCGACGAGGCGGTCAACCAGCAGCTCGAGGCGGTGCGCCACCAGCTCGAGACCCAGCGGGACCGCTTCGA GCGGCGCTTCCAGGAGAAGAAGGAGAAGATCACCGCCGGTGACGACCTCTCCCCGGGCGTGCTCAAGACCGTCAAGGTCC ACCTGGCCGTCAAGCGCCGCCTGCAGCCGGGCGACAAGTTCGCCGGCCGCCACGGCAACAAGGGCGTGATCTCCATGATC GTCCCCGAGGAGGACATGCCCTACATGGACGACGGCACTCCGGTGGAGGTGGTTCTCTCGCCGCTCGGCGTGCCGTCGCG GATGAACGTCGGCCAGGTGCTCGAGACGCACCTCGGCTGGGCGGCGCGTGGGCTGGGCCACCAGATCGGGCAGATGCTTG AGCAGCAGGCCGACGCCGAAGCCCTGCGCGGCTATCTCTCCGAGATCTACGACGCCTCGGGGCGCAAGGAGGAGCTCGAG ACCCTCAGCGAGGAGGAACTCCAGGAGCTCTGCCACAATCTCAAAGGTGGGGTGCCTGCGGCGACGCCGGTCTTCGACGG CGCCAACGAGGGCGAGATCAAGCGCTGGCTGAAACTCGCCGGGCTGCCCGAGTCGGGGCAGACCACGCTCTACGACGGGC GGACCGGCGACGCCTTCGACCGGCCGATCACGGTGGGCTATATGTACATGCTCAAGCTCAACCACCTGGTCGACGACAAG GTCCACGCCCGCGCCACCGGCCCGTACTCGCTGGTGACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGTGGTCAGCG CTTCGGCGAGATGGAGGTCTGGGCGCTGGAGGCGTACGGTGCGGCGTACACGCTGCAGGAGATGCTCACCGTCAAGTCCG ACGACGTCAGCGGCCGGACCAAGATGTACAAGAACATCGTCGACGGGGACCACCGCATGGAGGCCGGTATGCCGGAGTCG TTCAACGTCCTGGTCAAGGAGATCCGTTCCCTGGGCATCAACATCGAACTGGAGAGGGACGACTGA
Upstream 100 bases:
>100_bases TGACAAGGCAACGTTACGCCCGGTGCGGTCCCTTTGGCAACGCTGTCCGCGGGAATCCGCGGTCTGGTTCGAGAAGCTGC TCAAGCGCTGAGGAAGCCCG
Downstream 100 bases:
>100_bases CAGCGGCGCTCAGCGGCGGGTGCGCGGCGGCCGCGGTGACCTTTGGGGGCCGTGGCCGGGCGCCGCCTGAGCGCTGGCGT ACAGGTTCAGATGCCCGGGG
Product: DNA-directed RNA polymerase subunit beta
Products: NA
Alternate protein names: RNAP subunit beta; RNA polymerase subunit beta; Transcriptase subunit beta
Number of amino acids: Translated: 1381; Mature: 1380
Protein sequence:
>1381_residues MAYSFTEKKRIRKDFGKLPNILDVPYLLATQVDSYRQFLQDEVSEDARDTEVGLEGAFRSVFPIQSHSGNAELQYVSYRI GDPPFEVKECQSRGLTYAAPLRMLVRLALYDKEGGGVKDIKEQEVYMGEMPLMTSTGTFVVNGTERVIVNQLHRSPGVFF DHDKGKSHSSGKLLFSARVIPYRGSWLDFEFDPKDTIYVRIDRRRKLPATILLRALGYTPEEILYAFFDTDRFHLGSGNK VVLDLVPERLRGETASFDIVAGGETIVEAGRRVTARHVKQLQKSGVEQLEVPEDYLTGKIIAHDVIDPATGEILAEANTT LTPEITQSLFDAGIREIETLFVNDLDRGPYMSTTLAADATRSQMEALVEIYRMMRPGEPPTKDAAENLFHTLFFTSDRYD LSPVGRMKFNLRVGRDEVRGPGILYDGKYFAGLGNADKEADDLIEQYGESSDILDVLRELIDIRNGNGQVDDIDHLGNRR VRSVGEMAENVFRVGLVRVERAVKERLSLAESEGLMPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRISA LGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYARANRYGFLETAYRKVVDGQVTDQVEYLSAIEES RYVIAQANARVDESGYLADDLISCRHQNEFTMATADRVQYMDVSPRQIVSVAASLVPFLEHDDANRALMGANMQRQAVPT LRADKPLVGTGMERTVARDSGVIVTAERGGVVEQVDSGRIVVRVDDEETTPGEPGVDIYSLTKYTRSNQNTCFSQKPLVH VGDRVARGDALADGPSTDMGELALGQNMLVAFMPWNGYNFEDSILISEKLVKEDRYTSVHIEELTCVARDTKLGSEEITS DIPNVSESALSRLDESGIVYIGAEVKAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGMDGTVIDVQ VFTRDGVEKDERARAIEREEIARVRKDLDDEARIFEDDAYARLEKLLVGKVAEGGPKGLGSGAEVTEAYLQDLPRERWFE IRMRDEAVNQQLEAVRHQLETQRDRFERRFQEKKEKITAGDDLSPGVLKTVKVHLAVKRRLQPGDKFAGRHGNKGVISMI VPEEDMPYMDDGTPVEVVLSPLGVPSRMNVGQVLETHLGWAARGLGHQIGQMLEQQADAEALRGYLSEIYDASGRKEELE TLSEEELQELCHNLKGGVPAATPVFDGANEGEIKRWLKLAGLPESGQTTLYDGRTGDAFDRPITVGYMYMLKLNHLVDDK VHARATGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRTKMYKNIVDGDHRMEAGMPES FNVLVKEIRSLGINIELERDD
Sequences:
>Translated_1381_residues MAYSFTEKKRIRKDFGKLPNILDVPYLLATQVDSYRQFLQDEVSEDARDTEVGLEGAFRSVFPIQSHSGNAELQYVSYRI GDPPFEVKECQSRGLTYAAPLRMLVRLALYDKEGGGVKDIKEQEVYMGEMPLMTSTGTFVVNGTERVIVNQLHRSPGVFF DHDKGKSHSSGKLLFSARVIPYRGSWLDFEFDPKDTIYVRIDRRRKLPATILLRALGYTPEEILYAFFDTDRFHLGSGNK VVLDLVPERLRGETASFDIVAGGETIVEAGRRVTARHVKQLQKSGVEQLEVPEDYLTGKIIAHDVIDPATGEILAEANTT LTPEITQSLFDAGIREIETLFVNDLDRGPYMSTTLAADATRSQMEALVEIYRMMRPGEPPTKDAAENLFHTLFFTSDRYD LSPVGRMKFNLRVGRDEVRGPGILYDGKYFAGLGNADKEADDLIEQYGESSDILDVLRELIDIRNGNGQVDDIDHLGNRR VRSVGEMAENVFRVGLVRVERAVKERLSLAESEGLMPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRISA LGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYARANRYGFLETAYRKVVDGQVTDQVEYLSAIEES RYVIAQANARVDESGYLADDLISCRHQNEFTMATADRVQYMDVSPRQIVSVAASLVPFLEHDDANRALMGANMQRQAVPT LRADKPLVGTGMERTVARDSGVIVTAERGGVVEQVDSGRIVVRVDDEETTPGEPGVDIYSLTKYTRSNQNTCFSQKPLVH VGDRVARGDALADGPSTDMGELALGQNMLVAFMPWNGYNFEDSILISEKLVKEDRYTSVHIEELTCVARDTKLGSEEITS DIPNVSESALSRLDESGIVYIGAEVKAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGMDGTVIDVQ VFTRDGVEKDERARAIEREEIARVRKDLDDEARIFEDDAYARLEKLLVGKVAEGGPKGLGSGAEVTEAYLQDLPRERWFE IRMRDEAVNQQLEAVRHQLETQRDRFERRFQEKKEKITAGDDLSPGVLKTVKVHLAVKRRLQPGDKFAGRHGNKGVISMI VPEEDMPYMDDGTPVEVVLSPLGVPSRMNVGQVLETHLGWAARGLGHQIGQMLEQQADAEALRGYLSEIYDASGRKEELE TLSEEELQELCHNLKGGVPAATPVFDGANEGEIKRWLKLAGLPESGQTTLYDGRTGDAFDRPITVGYMYMLKLNHLVDDK VHARATGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRTKMYKNIVDGDHRMEAGMPES FNVLVKEIRSLGINIELERDD >Mature_1380_residues AYSFTEKKRIRKDFGKLPNILDVPYLLATQVDSYRQFLQDEVSEDARDTEVGLEGAFRSVFPIQSHSGNAELQYVSYRIG DPPFEVKECQSRGLTYAAPLRMLVRLALYDKEGGGVKDIKEQEVYMGEMPLMTSTGTFVVNGTERVIVNQLHRSPGVFFD HDKGKSHSSGKLLFSARVIPYRGSWLDFEFDPKDTIYVRIDRRRKLPATILLRALGYTPEEILYAFFDTDRFHLGSGNKV VLDLVPERLRGETASFDIVAGGETIVEAGRRVTARHVKQLQKSGVEQLEVPEDYLTGKIIAHDVIDPATGEILAEANTTL TPEITQSLFDAGIREIETLFVNDLDRGPYMSTTLAADATRSQMEALVEIYRMMRPGEPPTKDAAENLFHTLFFTSDRYDL SPVGRMKFNLRVGRDEVRGPGILYDGKYFAGLGNADKEADDLIEQYGESSDILDVLRELIDIRNGNGQVDDIDHLGNRRV RSVGEMAENVFRVGLVRVERAVKERLSLAESEGLMPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRISAL GPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYARANRYGFLETAYRKVVDGQVTDQVEYLSAIEESR YVIAQANARVDESGYLADDLISCRHQNEFTMATADRVQYMDVSPRQIVSVAASLVPFLEHDDANRALMGANMQRQAVPTL RADKPLVGTGMERTVARDSGVIVTAERGGVVEQVDSGRIVVRVDDEETTPGEPGVDIYSLTKYTRSNQNTCFSQKPLVHV GDRVARGDALADGPSTDMGELALGQNMLVAFMPWNGYNFEDSILISEKLVKEDRYTSVHIEELTCVARDTKLGSEEITSD IPNVSESALSRLDESGIVYIGAEVKAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGMDGTVIDVQV FTRDGVEKDERARAIEREEIARVRKDLDDEARIFEDDAYARLEKLLVGKVAEGGPKGLGSGAEVTEAYLQDLPRERWFEI RMRDEAVNQQLEAVRHQLETQRDRFERRFQEKKEKITAGDDLSPGVLKTVKVHLAVKRRLQPGDKFAGRHGNKGVISMIV PEEDMPYMDDGTPVEVVLSPLGVPSRMNVGQVLETHLGWAARGLGHQIGQMLEQQADAEALRGYLSEIYDASGRKEELET LSEEELQELCHNLKGGVPAATPVFDGANEGEIKRWLKLAGLPESGQTTLYDGRTGDAFDRPITVGYMYMLKLNHLVDDKV HARATGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRTKMYKNIVDGDHRMEAGMPESF NVLVKEIRSLGINIELERDD
Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RNA polymerase beta chain family
Homologues:
Organism=Homo sapiens, GI238908505, Length=293, Percent_Identity=31.740614334471, Blast_Score=126, Evalue=1e-28, Organism=Homo sapiens, GI238908503, Length=293, Percent_Identity=31.740614334471, Blast_Score=126, Evalue=1e-28, Organism=Homo sapiens, GI33469941, Length=260, Percent_Identity=33.0769230769231, Blast_Score=124, Evalue=6e-28, Organism=Homo sapiens, GI212286172, Length=263, Percent_Identity=33.4600760456274, Blast_Score=124, Evalue=7e-28, Organism=Homo sapiens, GI4505941, Length=246, Percent_Identity=32.1138211382114, Blast_Score=123, Evalue=1e-27, Organism=Escherichia coli, GI1790419, Length=1383, Percent_Identity=68.2574114244396, Blast_Score=1950, Evalue=0.0, Organism=Caenorhabditis elegans, GI17552304, Length=246, Percent_Identity=32.520325203252, Blast_Score=124, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17506623, Length=246, Percent_Identity=30.8943089430894, Blast_Score=113, Evalue=6e-25, Organism=Caenorhabditis elegans, GI25144348, Length=292, Percent_Identity=28.7671232876712, Blast_Score=112, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6324781, Length=301, Percent_Identity=30.8970099667774, Blast_Score=131, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6324725, Length=247, Percent_Identity=33.1983805668016, Blast_Score=124, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6325267, Length=249, Percent_Identity=30.5220883534137, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI17647877, Length=294, Percent_Identity=30.952380952381, Blast_Score=120, Evalue=8e-27, Organism=Drosophila melanogaster, GI17136444, Length=246, Percent_Identity=30.8943089430894, Blast_Score=120, Evalue=1e-26, Organism=Drosophila melanogaster, GI17136446, Length=253, Percent_Identity=33.201581027668, Blast_Score=107, Evalue=7e-23,
Paralogues:
None
Copy number: 4233 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): RPOB_HALHL (A1WVC9)
Other databases:
- EMBL: CP000544 - RefSeq: YP_001002443.1 - ProteinModelPortal: A1WVC9 - STRING: A1WVC9 - GeneID: 4710976 - GenomeReviews: CP000544_GR - KEGG: hha:Hhal_0865 - eggNOG: COG0085 - HOGENOM: HBG285547 - OMA: FMTWEGY - PhylomeDB: A1WVC9 - ProtClustDB: PRK00405 - BioCyc: HHAL349124:HHAL_0865-MONOMER - HAMAP: MF_01321 - InterPro: IPR010243 - InterPro: IPR019462 - InterPro: IPR015712 - InterPro: IPR007120 - InterPro: IPR007121 - InterPro: IPR007644 - InterPro: IPR007642 - InterPro: IPR007645 - InterPro: IPR007641 - InterPro: IPR014724 - Gene3D: G3DSA:2.40.50.150 - PANTHER: PTHR20856 - TIGRFAMs: TIGR02013
Pfam domain/function: PF04563 RNA_pol_Rpb2_1; PF04561 RNA_pol_Rpb2_2; PF04565 RNA_pol_Rpb2_3; PF10385 RNA_pol_Rpb2_45; PF00562 RNA_pol_Rpb2_6; PF04560 RNA_pol_Rpb2_7
EC number: =2.7.7.6
Molecular weight: Translated: 153694; Mature: 153562
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS01166 RNA_POL_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSFTEKKRIRKDFGKLPNILDVPYLLATQVDSYRQFLQDEVSEDARDTEVGLEGAFRS CCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHH VFPIQSHSGNAELQYVSYRIGDPPFEVKECQSRGLTYAAPLRMLVRLALYDKEGGGVKDI CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC KEQEVYMGEMPLMTSTGTFVVNGTERVIVNQLHRSPGVFFDHDKGKSHSSGKLLFSARVI HHHHHHCCCCCEEECCCCEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEE PYRGSWLDFEFDPKDTIYVRIDRRRKLPATILLRALGYTPEEILYAFFDTDRFHLGSGNK EECCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHEEHHCCCCEEEECCCCE VVLDLVPERLRGETASFDIVAGGETIVEAGRRVTARHVKQLQKSGVEQLEVPEDYLTGKI EEEEECCHHHCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCHHCCCCHHHHCCHH IAHDVIDPATGEILAEANTTLTPEITQSLFDAGIREIETLFVNDLDRGPYMSTTLAADAT HHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RSQMEALVEIYRMMRPGEPPTKDAAENLFHTLFFTSDRYDLSPVGRMKFNLRVGRDEVRG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEECCHHCCC PGILYDGKYFAGLGNADKEADDLIEQYGESSDILDVLRELIDIRNGNGQVDDIDHLGNRR CCEEECCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHH VRSVGEMAENVFRVGLVRVERAVKERLSLAESEGLMPQELINAKPVAAAIKEFFGSSQLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHCHHHHH QFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI HHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHH NSLAVYARANRYGFLETAYRKVVDGQVTDQVEYLSAIEESRYVIAQANARVDESGYLADD HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHH LISCRHQNEFTMATADRVQYMDVSPRQIVSVAASLVPFLEHDDANRALMGANMQRQAVPT HHHHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHCCCC LRADKPLVGTGMERTVARDSGVIVTAERGGVVEQVDSGRIVVRVDDEETTPGEPGVDIYS CCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCHHH LTKYTRSNQNTCFSQKPLVHVGDRVARGDALADGPSTDMGELALGQNMLVAFMPWNGYNF HHHHHCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCC EDSILISEKLVKEDRYTSVHIEELTCVARDTKLGSEEITSDIPNVSESALSRLDESGIVY CCCEEHHHHHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCEEE IGAEVKAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGMDGTVIDVQ EECEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEE VFTRDGVEKDERARAIEREEIARVRKDLDDEARIFEDDAYARLEKLLVGKVAEGGPKGLG EEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC SGAEVTEAYLQDLPRERWFEIRMRDEAVNQQLEAVRHQLETQRDRFERRFQEKKEKITAG CCHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDLSPGVLKTVKVHLAVKRRLQPGDKFAGRHGNKGVISMIVPEEDMPYMDDGTPVEVVLS CCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHEEEE PLGVPSRMNVGQVLETHLGWAARGLGHQIGQMLEQQADAEALRGYLSEIYDASGRKEELE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH TLSEEELQELCHNLKGGVPAATPVFDGANEGEIKRWLKLAGLPESGQTTLYDGRTGDAFD HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC RPITVGYMYMLKLNHLVDDKVHARATGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHC AAYTLQEMLTVKSDDVSGRTKMYKNIVDGDHRMEAGMPESFNVLVKEIRSLGINIELERD HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEECC D C >Mature Secondary Structure AYSFTEKKRIRKDFGKLPNILDVPYLLATQVDSYRQFLQDEVSEDARDTEVGLEGAFRS CCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHH VFPIQSHSGNAELQYVSYRIGDPPFEVKECQSRGLTYAAPLRMLVRLALYDKEGGGVKDI CCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC KEQEVYMGEMPLMTSTGTFVVNGTERVIVNQLHRSPGVFFDHDKGKSHSSGKLLFSARVI HHHHHHCCCCCEEECCCCEEECCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEE PYRGSWLDFEFDPKDTIYVRIDRRRKLPATILLRALGYTPEEILYAFFDTDRFHLGSGNK EECCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHEEHHCCCCEEEECCCCE VVLDLVPERLRGETASFDIVAGGETIVEAGRRVTARHVKQLQKSGVEQLEVPEDYLTGKI EEEEECCHHHCCCCCCEEEEECCHHHHHCCCHHHHHHHHHHHHCCCHHCCCCHHHHCCHH IAHDVIDPATGEILAEANTTLTPEITQSLFDAGIREIETLFVNDLDRGPYMSTTLAADAT HHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RSQMEALVEIYRMMRPGEPPTKDAAENLFHTLFFTSDRYDLSPVGRMKFNLRVGRDEVRG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCEEEEEEECCHHCCC PGILYDGKYFAGLGNADKEADDLIEQYGESSDILDVLRELIDIRNGNGQVDDIDHLGNRR CCEEECCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCHH VRSVGEMAENVFRVGLVRVERAVKERLSLAESEGLMPQELINAKPVAAAIKEFFGSSQLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHCHHHHH QFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI HHHHCCCCHHHHHHHHHHHCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHH NSLAVYARANRYGFLETAYRKVVDGQVTDQVEYLSAIEESRYVIAQANARVDESGYLADD HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHH LISCRHQNEFTMATADRVQYMDVSPRQIVSVAASLVPFLEHDDANRALMGANMQRQAVPT HHHHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHCCCC LRADKPLVGTGMERTVARDSGVIVTAERGGVVEQVDSGRIVVRVDDEETTPGEPGVDIYS CCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCHHH LTKYTRSNQNTCFSQKPLVHVGDRVARGDALADGPSTDMGELALGQNMLVAFMPWNGYNF HHHHHCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCC EDSILISEKLVKEDRYTSVHIEELTCVARDTKLGSEEITSDIPNVSESALSRLDESGIVY CCCEEHHHHHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCEEE IGAEVKAGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPTGMDGTVIDVQ EECEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEE VFTRDGVEKDERARAIEREEIARVRKDLDDEARIFEDDAYARLEKLLVGKVAEGGPKGLG EEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC SGAEVTEAYLQDLPRERWFEIRMRDEAVNQQLEAVRHQLETQRDRFERRFQEKKEKITAG CCHHHHHHHHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDLSPGVLKTVKVHLAVKRRLQPGDKFAGRHGNKGVISMIVPEEDMPYMDDGTPVEVVLS CCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHEEEE PLGVPSRMNVGQVLETHLGWAARGLGHQIGQMLEQQADAEALRGYLSEIYDASGRKEELE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH TLSEEELQELCHNLKGGVPAATPVFDGANEGEIKRWLKLAGLPESGQTTLYDGRTGDAFD HCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC RPITVGYMYMLKLNHLVDDKVHARATGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEHHC AAYTLQEMLTVKSDDVSGRTKMYKNIVDGDHRMEAGMPESFNVLVKEIRSLGINIELERD HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEECC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA