The gene/protein map for NC_008789 is currently unavailable.
Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997622

Identifier: 121997622

GI number: 121997622

Start: 913198

End: 913995

Strand: Reverse

Name: 121997622

Synonym: Hhal_0831

Alternate gene names: NA

Gene position: 913995-913198 (Counterclockwise)

Preceding gene: 121997623

Following gene: 121997621

Centisome position: 34.12

GC content: 73.81

Gene sequence:

>798_bases
GTGAACCAGCGCGCTCACCCCGGTGCCGTCTTCCTCTATACCGACTACACCCGCCTAGGCCCGTACGTCGGGCACCTCCA
CGCGCGGCTGCTCCAGGCCGTCGATCCTGCCCCCACCGTCATCGATCTGATGCACGACGCCCCGGCGTTCCGGGCCGACT
GCGCCGCGTACCTGCTCGCCGCCAACCTGCCGTACCTGCCCGCTGATGCCGTCGTGCTCGCCGTGGTGGACCCGGGGGTG
GGCACGGAGCGGCCGGGGCTGATACTACGCGCCCAAGAGCGGTGGCTGATCGGGCCGGACAACGGCCTGCTCGCCGTCGC
GGCCCAGGACGGGGCCGACGTCGAGGCCTACCGCCTGCCCCCGGCGCCGCCGGGCATCCCGGCGACCTTCCACGGCCGCG
ACGTGTTCGCCGACGCCGCTGCGCAGGTCGCGGCCACCGGGCGGCCGCCGTCCGGCGCCGAGCGGGTCGACCACTGGGTG
GGGCAGAAGTGGCTGCGGGACTGGGATGCGCTGATCTACACCGACGGCTTCGGTAACCTGATCAGTGGACGGCGGGGGGC
GAGCGCGCCGAGTCACGCGGATGTGCTCATCGGTGGCGAAGCCCTGGGGCAGGCCGAGAAATTCGCCGACGTCCCCGAGG
GTACCGCCTTCTGGTACGTGAACGCCCTGGGGCTGGTCGAGGTGGCGGTCAACAGCGGGTCGGCGGCCGCGCGGCTGGGC
GCGGCGCCCGGGACGCCGTTGCGTTGGCGGCCGCGTGGCGAGCCTCTGCTACAATCGGCGCCCCGGCCCGGGTCGTGA

Upstream 100 bases:

>100_bases
CTCGTCCAGCTCGTCGACCGGGAGGAGGCGATCGCCGCCCGGCGCGAGACGGAAGAGGACGCCGAGGAAACGGCCGAGGC
GTAACGCCTTGCGCACCGGG

Downstream 100 bases:

>100_bases
ATCGGGCCCCGGCGGGCATCACAACGGACGAGGAGAGAGCCATGAAAGCACCCGTGCGAGTCGCTGTCACCGGGGCGGCC
GGCCAGATCGGCTACAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNQRAHPGAVFLYTDYTRLGPYVGHLHARLLQAVDPAPTVIDLMHDAPAFRADCAAYLLAANLPYLPADAVVLAVVDPGV
GTERPGLILRAQERWLIGPDNGLLAVAAQDGADVEAYRLPPAPPGIPATFHGRDVFADAAAQVAATGRPPSGAERVDHWV
GQKWLRDWDALIYTDGFGNLISGRRGASAPSHADVLIGGEALGQAEKFADVPEGTAFWYVNALGLVEVAVNSGSAAARLG
AAPGTPLRWRPRGEPLLQSAPRPGS

Sequences:

>Translated_265_residues
MNQRAHPGAVFLYTDYTRLGPYVGHLHARLLQAVDPAPTVIDLMHDAPAFRADCAAYLLAANLPYLPADAVVLAVVDPGV
GTERPGLILRAQERWLIGPDNGLLAVAAQDGADVEAYRLPPAPPGIPATFHGRDVFADAAAQVAATGRPPSGAERVDHWV
GQKWLRDWDALIYTDGFGNLISGRRGASAPSHADVLIGGEALGQAEKFADVPEGTAFWYVNALGLVEVAVNSGSAAARLG
AAPGTPLRWRPRGEPLLQSAPRPGS
>Mature_265_residues
MNQRAHPGAVFLYTDYTRLGPYVGHLHARLLQAVDPAPTVIDLMHDAPAFRADCAAYLLAANLPYLPADAVVLAVVDPGV
GTERPGLILRAQERWLIGPDNGLLAVAAQDGADVEAYRLPPAPPGIPATFHGRDVFADAAAQVAATGRPPSGAERVDHWV
GQKWLRDWDALIYTDGFGNLISGRRGASAPSHADVLIGGEALGQAEKFADVPEGTAFWYVNALGLVEVAVNSGSAAARLG
AAPGTPLRWRPRGEPLLQSAPRPGS

Specific function: Unknown

COG id: COG1912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002747
- InterPro:   IPR023227
- InterPro:   IPR023228 [H]

Pfam domain/function: PF01887 DUF62 [H]

EC number: NA

Molecular weight: Translated: 27908; Mature: 27908

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRAHPGAVFLYTDYTRLGPYVGHLHARLLQAVDPAPTVIDLMHDAPAFRADCAAYLLA
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHH
ANLPYLPADAVVLAVVDPGVGTERPGLILRAQERWLIGPDNGLLAVAAQDGADVEAYRLP
CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEECCCCCEEEEEECCCCCEEEEECC
PAPPGIPATFHGRDVFADAAAQVAATGRPPSGAERVDHWVGQKWLRDWDALIYTDGFGNL
CCCCCCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCH
ISGRRGASAPSHADVLIGGEALGQAEKFADVPEGTAFWYVNALGLVEVAVNSGSAAARLG
HCCCCCCCCCCCCEEEECCHHHCCHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCEECC
AAPGTPLRWRPRGEPLLQSAPRPGS
CCCCCCEEECCCCCHHHHCCCCCCC
>Mature Secondary Structure
MNQRAHPGAVFLYTDYTRLGPYVGHLHARLLQAVDPAPTVIDLMHDAPAFRADCAAYLLA
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHH
ANLPYLPADAVVLAVVDPGVGTERPGLILRAQERWLIGPDNGLLAVAAQDGADVEAYRLP
CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEECCCCCEEEEEECCCCCEEEEECC
PAPPGIPATFHGRDVFADAAAQVAATGRPPSGAERVDHWVGQKWLRDWDALIYTDGFGNL
CCCCCCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCH
ISGRRGASAPSHADVLIGGEALGQAEKFADVPEGTAFWYVNALGLVEVAVNSGSAAARLG
HCCCCCCCCCCCCEEEECCHHHCCHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCEECC
AAPGTPLRWRPRGEPLLQSAPRPGS
CCCCCCEEECCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]