| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997606
Identifier: 121997606
GI number: 121997606
Start: 898715
End: 899680
Strand: Reverse
Name: 121997606
Synonym: Hhal_0815
Alternate gene names: NA
Gene position: 899680-898715 (Counterclockwise)
Preceding gene: 121997607
Following gene: 121997605
Centisome position: 33.59
GC content: 74.02
Gene sequence:
>966_bases GTGATCGACTGGGCCTTCGACCTGCTGCTCGCCGGTGGCCTGCTCGGGCTGGCCTGGCAGATCGTCGCCACCCGCATGCT GTTCCGCAGCGTGGTGCTGTTCATCGTCTTCGGCCTGCTCATGGCGGTGACCTGGGCACGCCTGGCGGCGCCGGACCTGG CCCTGGCCGAGGCGGCCATCGGCGCCGGGATCACCGGCGCACTGCTGCTCTCCGCCTACCGCGCCCTGCTGCCGCCGGAT AGCCGCGACGACGGCAGCGACTCGCCCCCGCCGCCGGTGCCGCCGTGGGCGGCGGTGACCGTGGCCGTCCTGGCCGGGGC GCTGATCGCCGGCATCGGCTGGGCGGTGGTGGGCCTCGAGCCGCCGGAGCAGACCGCCGGCCGCCTCGCCCTGGCGCGCC TGGAGGAGAGCGGGGTGGATAACCCGGTCACCGCCGTGCTGCTGAACTTCCGCAGCATCGACACCCTGGCCGAGGTGGTG GTGCTCTTCGTCGCCTTCCTCGCCGCCCGGGTGGTGGCCCAGGACCTGGTCCACGCCGGCCCCGGCGACTGGCTGCGCGC CAGTTACCGCGAGCCGCTGCTCGTCCAGCCGCTCATCGCCTTCGTCGGGCCGATGACGGTGCTCGCCGCCGGCTACCTGC TCTGGGCCGGCGCGGATCAGCCCGGTGGTGCCTTCCAGGCCGGTGCCGTGCTCGCCGCCCTCGGGGTGCTGCTGCGCCTG ACCGGACGGCTGCGTCCCACGGAGGAGACCAGCTTCGCTGAACGCCTGGCCCTGGTCGGCGGGCTGGTCCTGTTCACCGC CATCGGCCTGGCCGGTGCCGGGGTGGCCTCGGCGGTGCTCGACTATCCCGAGGCGTGGACCTACGAGCTCATCCTGATCA TCGAGACGGCGCTGATGCTCGCCATCGCCCTGCCGCTGGTCCTGCTGTTCAGCGGCTCCGGCGGGCTGCGCGGGGAGGTG CGGTGA
Upstream 100 bases:
>100_bases TGCTGATCTGGCTGCTGGCGCTGGTCGCCGCCACCGTCTCGGCGCACCTGATCGCCCGCTTCTCGCTGCGCGCCCAGGGC GGGGTGCGGAGGACGCCGCC
Downstream 100 bases:
>100_bases CCCAGGCCGCCTTCTACTGCCTGATCGCCGGTGCCCTGGCGGGGATCGGCATCTACGGGCTGATCACCCGGCGCCACCTG TTGCGCCGCATCCTGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MIDWAFDLLLAGGLLGLAWQIVATRMLFRSVVLFIVFGLLMAVTWARLAAPDLALAEAAIGAGITGALLLSAYRALLPPD SRDDGSDSPPPPVPPWAAVTVAVLAGALIAGIGWAVVGLEPPEQTAGRLALARLEESGVDNPVTAVLLNFRSIDTLAEVV VLFVAFLAARVVAQDLVHAGPGDWLRASYREPLLVQPLIAFVGPMTVLAAGYLLWAGADQPGGAFQAGAVLAALGVLLRL TGRLRPTEETSFAERLALVGGLVLFTAIGLAGAGVASAVLDYPEAWTYELILIIETALMLAIALPLVLLFSGSGGLRGEV R
Sequences:
>Translated_321_residues MIDWAFDLLLAGGLLGLAWQIVATRMLFRSVVLFIVFGLLMAVTWARLAAPDLALAEAAIGAGITGALLLSAYRALLPPD SRDDGSDSPPPPVPPWAAVTVAVLAGALIAGIGWAVVGLEPPEQTAGRLALARLEESGVDNPVTAVLLNFRSIDTLAEVV VLFVAFLAARVVAQDLVHAGPGDWLRASYREPLLVQPLIAFVGPMTVLAAGYLLWAGADQPGGAFQAGAVLAALGVLLRL TGRLRPTEETSFAERLALVGGLVLFTAIGLAGAGVASAVLDYPEAWTYELILIIETALMLAIALPLVLLFSGSGGLRGEV R >Mature_321_residues MIDWAFDLLLAGGLLGLAWQIVATRMLFRSVVLFIVFGLLMAVTWARLAAPDLALAEAAIGAGITGALLLSAYRALLPPD SRDDGSDSPPPPVPPWAAVTVAVLAGALIAGIGWAVVGLEPPEQTAGRLALARLEESGVDNPVTAVLLNFRSIDTLAEVV VLFVAFLAARVVAQDLVHAGPGDWLRASYREPLLVQPLIAFVGPMTVLAAGYLLWAGADQPGGAFQAGAVLAALGVLLRL TGRLRPTEETSFAERLALVGGLVLFTAIGLAGAGVASAVLDYPEAWTYELILIIETALMLAIALPLVLLFSGSGGLRGEV R
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33354; Mature: 33354
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDWAFDLLLAGGLLGLAWQIVATRMLFRSVVLFIVFGLLMAVTWARLAAPDLALAEAAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GAGITGALLLSAYRALLPPDSRDDGSDSPPPPVPPWAAVTVAVLAGALIAGIGWAVVGLE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCC PPEQTAGRLALARLEESGVDNPVTAVLLNFRSIDTLAEVVVLFVAFLAARVVAQDLVHAG CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGDWLRASYREPLLVQPLIAFVGPMTVLAAGYLLWAGADQPGGAFQAGAVLAALGVLLRL CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH TGRLRPTEETSFAERLALVGGLVLFTAIGLAGAGVASAVLDYPEAWTYELILIIETALML HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AIALPLVLLFSGSGGLRGEVR HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIDWAFDLLLAGGLLGLAWQIVATRMLFRSVVLFIVFGLLMAVTWARLAAPDLALAEAAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GAGITGALLLSAYRALLPPDSRDDGSDSPPPPVPPWAAVTVAVLAGALIAGIGWAVVGLE CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCC PPEQTAGRLALARLEESGVDNPVTAVLLNFRSIDTLAEVVVLFVAFLAARVVAQDLVHAG CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGDWLRASYREPLLVQPLIAFVGPMTVLAAGYLLWAGADQPGGAFQAGAVLAALGVLLRL CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHH TGRLRPTEETSFAERLALVGGLVLFTAIGLAGAGVASAVLDYPEAWTYELILIIETALML HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AIALPLVLLFSGSGGLRGEVR HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA