| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997596
Identifier: 121997596
GI number: 121997596
Start: 886268
End: 887134
Strand: Reverse
Name: 121997596
Synonym: Hhal_0805
Alternate gene names: NA
Gene position: 887134-886268 (Counterclockwise)
Preceding gene: 121997602
Following gene: 121997594
Centisome position: 33.12
GC content: 70.93
Gene sequence:
>867_bases ATGAACCAGTCGACAGTCAGTGCAGTCGCGCCCCCCGAGGTTCTTCCCCCCGTCCCGCTTGCGCTGCAGGAGCAGATCGA AGGGTTGGCCGGGCAGGCCCGGAAGCCGGTGCTTGAGCTGGAGCAGGATGGCCGGAAGCTGGTCGTCAAGTTCCCGGACG ACAAGGGGCGGAGCTGGATCAAGTCCCAGGCCATGCGCATGAGCGCCTCGACGATGGCCGGTGAACGGCTGCCGCTGGAG CCGTTTCAAATGGCCGCGCCTGGACCGCGGGTCCTGTTCGAGGCCGGCCGGCTCGACGCGCTGCGCCGTGCCGGGGCGCC CGTGCCGCGGCTGGTGGGGGTGAAGGCCAACCGGTATCTGGTGATGGAGGCCGCGGGCACACCGCTCGAGCGGCAGCTGC GGCGGGCGACCGAGCCGCGGGCCGCCTGCGGCGATCAGGTGGTGGCGGCCGCCGAGCTGCTTGGTTCGCTCCACGCCCAG GGGCACTGGCACGGCGCCCCCCGCATCCGAAACGTGCTGGTCGATGAGGCCGGGGCCATCCACCTGATCGACTTCGAAGA AGACCTCCGGGCCGTGCCTGCGGAGGTATGTGCCGCCAACGACATCGTCAAGTTTCTCTCCTCACTGGTGATCCTGCGGG GCAAGAAGCACCCGCCCCAGGTGTCGCTGGCCGAAGAGGCATTGGTGGCCTATCTGCAGACCGCCGGTGGCGCGCAAGCG CGCGGATGCCTGGAGCGCTACCAGTCGCGATCCCGGCGCATACAGGGAGTGATGGCTGGGGTGGCCCGCTGGGTGGGCGG GGACGCCCGGCGCATCGCGGCCCTCGGGCAGGCCCTCCGGGGTGGGCTGGAGCGGACCGCCGACTAG
Upstream 100 bases:
>100_bases TCCTGGATATCCCGGGGTGGCGTCAGTGGACAAAACGTGCGGGATTGTAGCGATTTCCCGCAGGTGGCGCGAGAGAAGCG GAACCCATAGAATCGCACGC
Downstream 100 bases:
>100_bases CGGGCGGGGTCGCGGAGCAGGGCCTCCACCACGTCGATTGCCCCGAAAGTCCGCTGCACGTCCTTGCCCAGGCGCCGCCG CACCGGGCCCAGCCAGCGCT
Product: Mn2+-dependent serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNQSTVSAVAPPEVLPPVPLALQEQIEGLAGQARKPVLELEQDGRKLVVKFPDDKGRSWIKSQAMRMSASTMAGERLPLE PFQMAAPGPRVLFEAGRLDALRRAGAPVPRLVGVKANRYLVMEAAGTPLERQLRRATEPRAACGDQVVAAAELLGSLHAQ GHWHGAPRIRNVLVDEAGAIHLIDFEEDLRAVPAEVCAANDIVKFLSSLVILRGKKHPPQVSLAEEALVAYLQTAGGAQA RGCLERYQSRSRRIQGVMAGVARWVGGDARRIAALGQALRGGLERTAD
Sequences:
>Translated_288_residues MNQSTVSAVAPPEVLPPVPLALQEQIEGLAGQARKPVLELEQDGRKLVVKFPDDKGRSWIKSQAMRMSASTMAGERLPLE PFQMAAPGPRVLFEAGRLDALRRAGAPVPRLVGVKANRYLVMEAAGTPLERQLRRATEPRAACGDQVVAAAELLGSLHAQ GHWHGAPRIRNVLVDEAGAIHLIDFEEDLRAVPAEVCAANDIVKFLSSLVILRGKKHPPQVSLAEEALVAYLQTAGGAQA RGCLERYQSRSRRIQGVMAGVARWVGGDARRIAALGQALRGGLERTAD >Mature_288_residues MNQSTVSAVAPPEVLPPVPLALQEQIEGLAGQARKPVLELEQDGRKLVVKFPDDKGRSWIKSQAMRMSASTMAGERLPLE PFQMAAPGPRVLFEAGRLDALRRAGAPVPRLVGVKANRYLVMEAAGTPLERQLRRATEPRAACGDQVVAAAELLGSLHAQ GHWHGAPRIRNVLVDEAGAIHLIDFEEDLRAVPAEVCAANDIVKFLSSLVILRGKKHPPQVSLAEEALVAYLQTAGGAQA RGCLERYQSRSRRIQGVMAGVARWVGGDARRIAALGQALRGGLERTAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30979; Mature: 30979
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSTVSAVAPPEVLPPVPLALQEQIEGLAGQARKPVLELEQDGRKLVVKFPDDKGRSWI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCHHHH KSQAMRMSASTMAGERLPLEPFQMAAPGPRVLFEAGRLDALRRAGAPVPRLVGVKANRYL HHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEE VMEAAGTPLERQLRRATEPRAACGDQVVAAAELLGSLHAQGHWHGAPRIRNVLVDEAGAI EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEE HLIDFEEDLRAVPAEVCAANDIVKFLSSLVILRGKKHPPQVSLAEEALVAYLQTAGGAQA EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHH RGCLERYQSRSRRIQGVMAGVARWVGGDARRIAALGQALRGGLERTAD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQSTVSAVAPPEVLPPVPLALQEQIEGLAGQARKPVLELEQDGRKLVVKFPDDKGRSWI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCHHHH KSQAMRMSASTMAGERLPLEPFQMAAPGPRVLFEAGRLDALRRAGAPVPRLVGVKANRYL HHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCEE VMEAAGTPLERQLRRATEPRAACGDQVVAAAELLGSLHAQGHWHGAPRIRNVLVDEAGAI EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEE HLIDFEEDLRAVPAEVCAANDIVKFLSSLVILRGKKHPPQVSLAEEALVAYLQTAGGAQA EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHH RGCLERYQSRSRRIQGVMAGVARWVGGDARRIAALGQALRGGLERTAD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA