| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is yibN [C]
Identifier: 121997489
GI number: 121997489
Start: 774310
End: 774759
Strand: Reverse
Name: yibN [C]
Synonym: Hhal_0692
Alternate gene names: 121997489
Gene position: 774759-774310 (Counterclockwise)
Preceding gene: 121997490
Following gene: 121997488
Centisome position: 28.93
GC content: 70.67
Gene sequence:
>450_bases ATGACCGAGCTGCTGCACTGGATCGAGGAAGACCCCGTCCGCTTCGTGGCGCTGGCCGCCGTGGCGATTCTCGGCGGGCG TTTGCTCTGGCGCCGGCTGACCCGGCGTTATCGACCGATCCCCGTGACCGAGGCGGTGTGCTGGGTCAACGACGGCGAGA CGCTGTTCCTCGATGTGCGGACCACGCCCGAGACCCGCGGCGGTGTCCTCCCTGGTGCCGTGCATATCCCCAAGCACCAG CTGCGCCGGCGCCTGCAGGAGCTGCGCAGCCACTCCGCGGCGGGCGGCCCGGTGGTCGTCTACTGCCACAGCGGCATGCG CTCGGCCGGCGCTGCCCACCTGCTGACCCGCCACGGCTTCGAGCCGGTCTACAACCTCCAGGGTGGGGTCATGGCCTGGC ACGCCCAGGGGCTTCCGTTCGAGTCGGGGCCGGGAGCGCGTGATGAATAA
Upstream 100 bases:
>100_bases CCGTGGATCGCCGCCAACAAGCTCGTCGACCGCGACTGAACCAGCGTGCGCCGGCGGTGCGGCCCCCCGGGGTTCGCCCG CCGGCGGCGCCGGGAGCCCC
Downstream 100 bases:
>100_bases GAAGGTCCGTCGCCGCGGCATCTTCCTGCTCCCCAACCTGTTCACCACGGGCTGCCTCTTCTTCGGCTTCCTGGCGGTGA TCTCCGCCATCGACGGCGAG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; NAD(FAD)-Dependent Dehydrogenase; Rhodanese-Like Domain-Containing Protein; Rhodanese Family Protein; Hydrolase; Transmembrane Protein; Hydroxyacylglutathione Hydrolase
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTELLHWIEEDPVRFVALAAVAILGGRLLWRRLTRRYRPIPVTEAVCWVNDGETLFLDVRTTPETRGGVLPGAVHIPKHQ LRRRLQELRSHSAAGGPVVVYCHSGMRSAGAAHLLTRHGFEPVYNLQGGVMAWHAQGLPFESGPGARDE
Sequences:
>Translated_149_residues MTELLHWIEEDPVRFVALAAVAILGGRLLWRRLTRRYRPIPVTEAVCWVNDGETLFLDVRTTPETRGGVLPGAVHIPKHQ LRRRLQELRSHSAAGGPVVVYCHSGMRSAGAAHLLTRHGFEPVYNLQGGVMAWHAQGLPFESGPGARDE >Mature_148_residues TELLHWIEEDPVRFVALAAVAILGGRLLWRRLTRRYRPIPVTEAVCWVNDGETLFLDVRTTPETRGGVLPGAVHIPKHQL RRRLQELRSHSAAGGPVVVYCHSGMRSAGAAHLLTRHGFEPVYNLQGGVMAWHAQGLPFESGPGARDE
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790040, Length=144, Percent_Identity=26.3888888888889, Blast_Score=63, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16545; Mature: 16414
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELLHWIEEDPVRFVALAAVAILGGRLLWRRLTRRYRPIPVTEAVCWVNDGETLFLDVR CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEE TTPETRGGVLPGAVHIPKHQLRRRLQELRSHSAAGGPVVVYCHSGMRSAGAAHLLTRHGF CCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCC EPVYNLQGGVMAWHAQGLPFESGPGARDE CCEEECCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure TELLHWIEEDPVRFVALAAVAILGGRLLWRRLTRRYRPIPVTEAVCWVNDGETLFLDVR CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEE TTPETRGGVLPGAVHIPKHQLRRRLQELRSHSAAGGPVVVYCHSGMRSAGAAHLLTRHGF CCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCC EPVYNLQGGVMAWHAQGLPFESGPGARDE CCEEECCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA