| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997433
Identifier: 121997433
GI number: 121997433
Start: 712133
End: 713011
Strand: Reverse
Name: 121997433
Synonym: Hhal_0634
Alternate gene names: NA
Gene position: 713011-712133 (Counterclockwise)
Preceding gene: 121997434
Following gene: 121997424
Centisome position: 26.62
GC content: 59.95
Gene sequence:
>879_bases ATGAAAAGGGTACCCGGAGATCTTGGGCGTGAGCTGATTCGCACCTGCCGCCGACTGGGATTTCGAACCGGCAAGGCGCT GGTCGTTGTTCTGCTTGTGCTGCTATCCATCGACACCCTGTCGAGTGGGCTCTTGCGGCTCCTGGAAGATGGGGGGGGCT TTCTCGCCGACCAGTGGGGATACACGGCGGCCCTTATCGCTGCGGTACTGGTATTAATCGGGGTTTGGATCTATCTGATT TACCATGAAATCCCGCCGTCTATGCACGCGACCGACGAGGAGAACCCGCAACCGCGCCGGGTACTGATCCTTCTGTTGAG CGCTCACCCGAACCCTAACAACTTGGTCAACGACCTCGCGAAGGGGGGAGTGCGTCCGTTGAATAGCTCTACGGACCTCG GGCTGGTGAACGATGCGCTGAGCAACTGGAGGATGCCTCTGGAGGCCATCCGCGCCCACTTGCCCAAGCTCGAGCGCGTC GTGGTCATCTACTCCTCCGGGACCCATGGATCGTGCAAGCAGTTTCCGGTATTTCGGCAGCTCGTCGAAAGCCTCCTTGA CGGGGCGGATCGGCAGGTGACGGTCGAGGGTCTGGATACGCACTCAACCGAAATGGCACACGGCTGCGATTTTGAGGACG TCAGCGCGGTCTGGCGGGCGATCGAATCGGTCTGGAACGGTCTGATCAAAACACGGGGGCTCCGGCTACGGGAGAGAGAT GTTCTTGTGGACATCACCGGGGGGACCAAGAAGGCCTCGGTGGCTGCTGCCTTATTCACGCAGGCTCAAGGGCGGCGCTG CCAGTATGTGCGCGTCGACAAGGCCGTTGGTGCTCGCATCAGCGTGATCGATATCGAATACGATCACGAAGACCGTTAA
Upstream 100 bases:
>100_bases TCCCTCCGGAGCGCCGGGGCCGAGAGCTCAGTGCCGATGAGATGGACGGCATGGATGCCCGACTCGCGTATTATCACGTG CAGCAGGTCAAGGCTGACAG
Downstream 100 bases:
>100_bases CACTCGTCTCGGCGGGCCTATCGAGCCAACCGGGCGGATGCCAAAGGGCTTTGATGGCCTGTTCTACGGCCATCCGCCGC TTCGTGATCAGGTTCTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKRVPGDLGRELIRTCRRLGFRTGKALVVVLLVLLSIDTLSSGLLRLLEDGGGFLADQWGYTAALIAAVLVLIGVWIYLI YHEIPPSMHATDEENPQPRRVLILLLSAHPNPNNLVNDLAKGGVRPLNSSTDLGLVNDALSNWRMPLEAIRAHLPKLERV VVIYSSGTHGSCKQFPVFRQLVESLLDGADRQVTVEGLDTHSTEMAHGCDFEDVSAVWRAIESVWNGLIKTRGLRLRERD VLVDITGGTKKASVAAALFTQAQGRRCQYVRVDKAVGARISVIDIEYDHEDR
Sequences:
>Translated_292_residues MKRVPGDLGRELIRTCRRLGFRTGKALVVVLLVLLSIDTLSSGLLRLLEDGGGFLADQWGYTAALIAAVLVLIGVWIYLI YHEIPPSMHATDEENPQPRRVLILLLSAHPNPNNLVNDLAKGGVRPLNSSTDLGLVNDALSNWRMPLEAIRAHLPKLERV VVIYSSGTHGSCKQFPVFRQLVESLLDGADRQVTVEGLDTHSTEMAHGCDFEDVSAVWRAIESVWNGLIKTRGLRLRERD VLVDITGGTKKASVAAALFTQAQGRRCQYVRVDKAVGARISVIDIEYDHEDR >Mature_292_residues MKRVPGDLGRELIRTCRRLGFRTGKALVVVLLVLLSIDTLSSGLLRLLEDGGGFLADQWGYTAALIAAVLVLIGVWIYLI YHEIPPSMHATDEENPQPRRVLILLLSAHPNPNNLVNDLAKGGVRPLNSSTDLGLVNDALSNWRMPLEAIRAHLPKLERV VVIYSSGTHGSCKQFPVFRQLVESLLDGADRQVTVEGLDTHSTEMAHGCDFEDVSAVWRAIESVWNGLIKTRGLRLRERD VLVDITGGTKKASVAAALFTQAQGRRCQYVRVDKAVGARISVIDIEYDHEDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32260; Mature: 32260
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVPGDLGRELIRTCRRLGFRTGKALVVVLLVLLSIDTLSSGLLRLLEDGGGFLADQWG CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCC YTAALIAAVLVLIGVWIYLIYHEIPPSMHATDEENPQPRRVLILLLSAHPNPNNLVNDLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH KGGVRPLNSSTDLGLVNDALSNWRMPLEAIRAHLPKLERVVVIYSSGTHGSCKQFPVFRQ HCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHH LVESLLDGADRQVTVEGLDTHSTEMAHGCDFEDVSAVWRAIESVWNGLIKTRGLRLRERD HHHHHHCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCC VLVDITGGTKKASVAAALFTQAQGRRCQYVRVDKAVGARISVIDIEYDHEDR EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHCCEEEEEEEECCCCCC >Mature Secondary Structure MKRVPGDLGRELIRTCRRLGFRTGKALVVVLLVLLSIDTLSSGLLRLLEDGGGFLADQWG CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCC YTAALIAAVLVLIGVWIYLIYHEIPPSMHATDEENPQPRRVLILLLSAHPNPNNLVNDLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH KGGVRPLNSSTDLGLVNDALSNWRMPLEAIRAHLPKLERVVVIYSSGTHGSCKQFPVFRQ HCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHH LVESLLDGADRQVTVEGLDTHSTEMAHGCDFEDVSAVWRAIESVWNGLIKTRGLRLRERD HHHHHHCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCC VLVDITGGTKKASVAAALFTQAQGRRCQYVRVDKAVGARISVIDIEYDHEDR EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA