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The map label for this gene is yejB [H]

Identifier: 121997397

GI number: 121997397

Start: 671812

End: 672909

Strand: Reverse

Name: yejB [H]

Synonym: Hhal_0596

Alternate gene names: 121997397

Gene position: 672909-671812 (Counterclockwise)

Preceding gene: 121997398

Following gene: 121997396

Centisome position: 25.12

GC content: 64.75

Gene sequence:

>1098_bases
ATGGGGAATATGCCGGCCTATATCCTGCGTCGCCTGCTGCTGATGATCCCGACCCTGCTCGGGATCATGGTCATCAACTT
TTTGATTGTGCAGGCCGCCCCGGGCGGGCCCATCGAGCGGATCACCGCTGAGCTGGCCGGCACCGGGGTCGAGGCGACCG
CCCGCGTGGCCGGCTCCGGCGGCGAGGTGGGGGCGGCCTTCGGCGAGGCCGAGGGTGGCTATCGCGGTGGTCACGGCATG
GACCCAGAGCTGCTCGCCGAGCTGGAACGGCAGTTCGGTTTCGATCTGCCTGCCCACGAGCGGTTCCTGACCATGATGGG
CAATTACCTGACCCTGGACTTCGGCGACAGCTTCTACCGGGATCAGTCGGTCCTCGAACTCATCGCCGAGGCGCTGCCGG
TATCCATCTCCCTGGGGCTGTGGACCCTGTTGCTGGTCTATCTTATCTCCATCCCGCTGGGCATCCGCAAAGCGGTGCGC
GACGGATCGCCCTTCGATGTCTGGACCTCGGCGCTGGTGATTATCGGTTATGCCGTGCCGGGGTTCCTGTTCGCCATCCT
GTTGATCATCCTCTTTGCGGGGGGCACCTATCTCGACCTCTTCCCGCTGCGCGGACTGGTCTCCGAGGGGTGGGCGGAGC
TCTCCTGGCCCATGCGCATCCTCGACTACCTGCACCACATCGCCTTGCCCGTGTTGGCCATGGTCATCGGCGGCTTTGCC
GGGCTGACCATGCTCACCAAGAACTCCTTCCTTGAAGAGATCCACAAGCAGTACGTGGTGACCGCCCGTGCCAAGGGGGT
CACCGAGCGCCGGGTGCTGTACGGCCACGTCTTCCGCAACGCCATGCTCATCGTTATCGCCGGCTTCCCGGCGGCCTTCG
TCTCGACCCTGTTCACCGGTGCGCTGCTCATCGAGGTGATCTTCTCGCTGGAGGGGCTGGGGCTGCTCGGGTTCGAGGCG
GCGGTGGACCGGGATTACCCGGTGATGTTCGGGACCCTGTTCATCTTCACCCTGCTCGGGCTGGTGCTGAACCTCGTCGG
CGATCTGATGTACGTCGCCGTCGACCCGCGCATCGATTTCGAGACCCGGGAGGTCTGA

Upstream 100 bases:

>100_bases
GGCCCCGAAGTACGGACTGGGGTTCGATACCTGGTGGGTCGACCCGGACAAGGAGCAACGGCTGCGCGAGGCCAACGGCC
CGCGGTCGGTCCGATAGCGG

Downstream 100 bases:

>100_bases
GCCGGTGGGTCCGTCCCTGTCGCCGATCAATCAGCGTCGCCTGGCCCGGTTCCGTGCCAACCGTCGCGGTTGGTGGGCAC
TGTGGATCTTTGTCGGGCTG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MGNMPAYILRRLLLMIPTLLGIMVINFLIVQAAPGGPIERITAELAGTGVEATARVAGSGGEVGAAFGEAEGGYRGGHGM
DPELLAELERQFGFDLPAHERFLTMMGNYLTLDFGDSFYRDQSVLELIAEALPVSISLGLWTLLLVYLISIPLGIRKAVR
DGSPFDVWTSALVIIGYAVPGFLFAILLIILFAGGTYLDLFPLRGLVSEGWAELSWPMRILDYLHHIALPVLAMVIGGFA
GLTMLTKNSFLEEIHKQYVVTARAKGVTERRVLYGHVFRNAMLIVIAGFPAAFVSTLFTGALLIEVIFSLEGLGLLGFEA
AVDRDYPVMFGTLFIFTLLGLVLNLVGDLMYVAVDPRIDFETREV

Sequences:

>Translated_365_residues
MGNMPAYILRRLLLMIPTLLGIMVINFLIVQAAPGGPIERITAELAGTGVEATARVAGSGGEVGAAFGEAEGGYRGGHGM
DPELLAELERQFGFDLPAHERFLTMMGNYLTLDFGDSFYRDQSVLELIAEALPVSISLGLWTLLLVYLISIPLGIRKAVR
DGSPFDVWTSALVIIGYAVPGFLFAILLIILFAGGTYLDLFPLRGLVSEGWAELSWPMRILDYLHHIALPVLAMVIGGFA
GLTMLTKNSFLEEIHKQYVVTARAKGVTERRVLYGHVFRNAMLIVIAGFPAAFVSTLFTGALLIEVIFSLEGLGLLGFEA
AVDRDYPVMFGTLFIFTLLGLVLNLVGDLMYVAVDPRIDFETREV
>Mature_364_residues
GNMPAYILRRLLLMIPTLLGIMVINFLIVQAAPGGPIERITAELAGTGVEATARVAGSGGEVGAAFGEAEGGYRGGHGMD
PELLAELERQFGFDLPAHERFLTMMGNYLTLDFGDSFYRDQSVLELIAEALPVSISLGLWTLLLVYLISIPLGIRKAVRD
GSPFDVWTSALVIIGYAVPGFLFAILLIILFAGGTYLDLFPLRGLVSEGWAELSWPMRILDYLHHIALPVLAMVIGGFAG
LTMLTKNSFLEEIHKQYVVTARAKGVTERRVLYGHVFRNAMLIVIAGFPAAFVSTLFTGALLIEVIFSLEGLGLLGFEAA
VDRDYPVMFGTLFIFTLLGLVLNLVGDLMYVAVDPRIDFETREV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=369, Percent_Identity=63.4146341463415, Blast_Score=469, Evalue=1e-133,
Organism=Escherichia coli, GI1789965, Length=377, Percent_Identity=29.973474801061, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1787497, Length=358, Percent_Identity=27.6536312849162, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1789888, Length=353, Percent_Identity=29.7450424929178, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787053, Length=359, Percent_Identity=27.8551532033426, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1787550, Length=259, Percent_Identity=24.3243243243243, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787761, Length=366, Percent_Identity=24.0437158469945, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39766; Mature: 39634

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNMPAYILRRLLLMIPTLLGIMVINFLIVQAAPGGPIERITAELAGTGVEATARVAGSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHCCCCC
GEVGAAFGEAEGGYRGGHGMDPELLAELERQFGFDLPAHERFLTMMGNYLTLDFGDSFYR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCHHHH
DQSVLELIAEALPVSISLGLWTLLLVYLISIPLGIRKAVRDGSPFDVWTSALVIIGYAVP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GFLFAILLIILFAGGTYLDLFPLRGLVSEGWAELSWPMRILDYLHHIALPVLAMVIGGFA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLTMLTKNSFLEEIHKQYVVTARAKGVTERRVLYGHVFRNAMLIVIAGFPAAFVSTLFTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH
ALLIEVIFSLEGLGLLGFEAAVDRDYPVMFGTLFIFTLLGLVLNLVGDLMYVAVDPRIDF
HHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
ETREV
CCCCC
>Mature Secondary Structure 
GNMPAYILRRLLLMIPTLLGIMVINFLIVQAAPGGPIERITAELAGTGVEATARVAGSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHCCCCC
GEVGAAFGEAEGGYRGGHGMDPELLAELERQFGFDLPAHERFLTMMGNYLTLDFGDSFYR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCHHHH
DQSVLELIAEALPVSISLGLWTLLLVYLISIPLGIRKAVRDGSPFDVWTSALVIIGYAVP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GFLFAILLIILFAGGTYLDLFPLRGLVSEGWAELSWPMRILDYLHHIALPVLAMVIGGFA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GLTMLTKNSFLEEIHKQYVVTARAKGVTERRVLYGHVFRNAMLIVIAGFPAAFVSTLFTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHH
ALLIEVIFSLEGLGLLGFEAAVDRDYPVMFGTLFIFTLLGLVLNLVGDLMYVAVDPRIDF
HHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
ETREV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]