| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121997389
Identifier: 121997389
GI number: 121997389
Start: 663587
End: 663820
Strand: Reverse
Name: 121997389
Synonym: Hhal_0588
Alternate gene names: NA
Gene position: 663820-663587 (Counterclockwise)
Preceding gene: 121997390
Following gene: 121997388
Centisome position: 24.78
GC content: 61.54
Gene sequence:
>234_bases ATGAAAGCCATCAAGGTACTGGGTAGCGGCTGTGCCAAGTGCAACAACACCGCCGAGCGGATCGAGCAGGTGGCTGCCGA TCTGGGTTTGGCTGCACAGGTGCAGAAGGAGACGGGGCCGGAGGCCCTGGTTCAGTATGGTGTGATGTCGACACCGGCCG TGGTGGTGGACGAGCAACTGGTCCACAGTGGCTCGGTGCCTGAACCCGAGCAGATCAAGGAGTGGCTGCAGTGA
Upstream 100 bases:
>100_bases CCGGGTGGATCCTCAATGCGGTCGAACCGCTACTATTCGCCGGGGTGTGAGGGGCTCGGCAGCCCGTTATCATGTCTGTG CAAACGGAGGAGCTTGTCCG
Downstream 100 bases:
>100_bases GTCTTTTGATTTTTATCGCATTTCTCGGCGCCTGCATGGCGGCGGCGGCTACCGGAGCGATGTTCGGCCCGGGGCGCTGG TACGACGAACTGGACAAGCC
Product: redox-active disulfide protein 2
Products: NA
Alternate protein names: Thiol-Disulfide Isomerase And Thioredoxins; Thiol-Disulfide Isomerase And Thioredoxins Family Protein; Thiol-Disulfide Isomerase And Thioredoxin; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin Family Protein; Glutaredoxin-Like Protein; Glutaredoxin Family Protein/Thio-Disulfide Isomerase; Glutaredoxin; Glutaredoxin Family Protein
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKAIKVLGSGCAKCNNTAERIEQVAADLGLAAQVQKETGPEALVQYGVMSTPAVVVDEQLVHSGSVPEPEQIKEWLQ
Sequences:
>Translated_77_residues MKAIKVLGSGCAKCNNTAERIEQVAADLGLAAQVQKETGPEALVQYGVMSTPAVVVDEQLVHSGSVPEPEQIKEWLQ >Mature_77_residues MKAIKVLGSGCAKCNNTAERIEQVAADLGLAAQVQKETGPEALVQYGVMSTPAVVVDEQLVHSGSVPEPEQIKEWLQ
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8190; Mature: 8190
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIKVLGSGCAKCNNTAERIEQVAADLGLAAQVQKETGPEALVQYGVMSTPAVVVDEQL CCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH VHSGSVPEPEQIKEWLQ HHCCCCCCHHHHHHHHC >Mature Secondary Structure MKAIKVLGSGCAKCNNTAERIEQVAADLGLAAQVQKETGPEALVQYGVMSTPAVVVDEQL CCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH VHSGSVPEPEQIKEWLQ HHCCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA