| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611865
Identifier: 121611865
GI number: 121611865
Start: 5497541
End: 5498863
Strand: Direct
Name: 121611865
Synonym: Veis_4967
Alternate gene names: NA
Gene position: 5497541-5498863 (Clockwise)
Preceding gene: 121611853
Following gene: 121611870
Centisome position: 98.76
GC content: 67.57
Gene sequence:
>1323_bases ATGATTTCTCACCGTGACCCCAACGCGACCGCCACACCGGACAGTTCCGCCAGCGACGAGGCCCGGTACGACGCGCAGGT GCTGCGCGACCTGCCGCGCAACTTCGCAGCCAACCTGGCGCATGGCATGTTGGGCATGACCGGGTTCCGGCTCATGAGCG CGCCGACCTTCGTGCCGGCCTACATCTACATGCTGTCGGGCTCCAAGCTGGCCGTGGGCCTGGCCCTGGGTGCGCAGTTC CTGGGCATGACCCTGTCCTCCATCTGGGGCGCCACGCTGATCGAACACCGCAACCAGGTGATGCGCGTCGTCTACGCGGT CGGCTGGCTCATGCGGCTGCAGATCCTGGGTCTGGCGCTCAGTGCCTTCGTGCTCTCAGGCTCCTGGGCGCTGGGGGCGG CCTGCGTGTTCCTGGCGCTGTTCGGCTTCTTCGGCGGTGTGCAGGGTGTGACCTTCAACGTGCTGATGTCCAAGGTGATC CCGGTCACGCAGCGCGGCCGGCTCACGGGCATGCGCAACTTCCTGGGCGGGCTCACGGCCTCGGGCGTGGCCTACCTGGG CGGCGAGTACCTGGTCGGCTCCAACGCCTTCGGCAACGGCTATGCGTCCACCTTCATGCTGGCCTTCATCCTGACCAGCA TCGGCATCAGCGCGCTGGCCTTCGTGCGCGAGCCCAAGTCGCTGACGGTGCGGGCCTCGCCCTCGCGCTTCATGCAGCGC CTGGCCGATGTGCCCGGCCTGCTGCGCGCCGATCCGCATTACCGGCGCTTTTTTTTCGCGCGCGCGCTGGCGGCGCTGGG CACGTCCGCCGTGCCTTTCTACATCCTGCACGCGGGCCAGTTCGTGCGCCTGTCGGGCGCCACGCTGGGCTATTTCTCAC TGGCCTTTTTGCTGTCGCAAATGATCAGCAACCTGGCCTGGGGCCGCATCGCGGACCGGCATGGCTACCGGCTCGTTTTT ATCCTGGGCGTGTGCATGTGGTGCGGTGCCACGCTGCTGCTGGTCCTGGGCGGCTCGCTGCCGCTGTTCCTGCTGGCCTT CTGCGGGCTGGGTGCGGGCTTCGGCGGTTACCAGGTGGCCGCGCAGAACTTCGTGCTGGAATTCGGCAAGGCGCACGAAC TGCCGATGCTGATCGCCATCTCCGACACGGCCTCGCACCTGATGATGGCCATCGGCCCGCTGGTGGGCGGCATCATCGCC ACGCAACTGGGCTATGCGCCGATCTTCTGGATGGCGCTGGCCTTCAAGACGCTTGCGCTGGCCATGGTCCTGCGCATCGA GGAGCCGCGGCACCGGCAGCGGGCAGGGATGCGCGCGTGCTGA
Upstream 100 bases:
>100_bases CGGGAATTCGGAATCCGGCAGATCGATGATCCAAGTCCCTGTCCATGAATGACTTTTCGAAACGCAGGCGGCGCGGCTGC CGTAAAAACGTACCGACACC
Downstream 100 bases:
>100_bases AACTGCGTGCAGTCAGCCATCCGGAACGCGCTTGCGCCCCGGCAGCCTTCGTCAGCGGCCTTGCACGCGCACGACCGGTT CCGTGCGCTGCCCGGACTGC
Product: major facilitator transporter
Products: NA
Alternate protein names: Permease Of Facilitator Superfamily
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPAYIYMLSGSKLAVGLALGAQF LGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLALSAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVI PVTQRGRLTGMRNFLGGLTASGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQMISNLAWGRIADRHGYRLVF ILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVAAQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIA TQLGYAPIFWMALAFKTLALAMVLRIEEPRHRQRAGMRAC
Sequences:
>Translated_440_residues MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPAYIYMLSGSKLAVGLALGAQF LGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLALSAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVI PVTQRGRLTGMRNFLGGLTASGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQMISNLAWGRIADRHGYRLVF ILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVAAQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIA TQLGYAPIFWMALAFKTLALAMVLRIEEPRHRQRAGMRAC >Mature_440_residues MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPAYIYMLSGSKLAVGLALGAQF LGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLALSAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVI PVTQRGRLTGMRNFLGGLTASGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQMISNLAWGRIADRHGYRLVF ILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVAAQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIA TQLGYAPIFWMALAFKTLALAMVLRIEEPRHRQRAGMRAC
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47283; Mature: 47283
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YIYMLSGSKLAVGLALGAQFLGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLAL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVIPVTQRGRLTGMRNFLGGLTA HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH SGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR CCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHH LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQ HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCEEEECCCHHHHHHHHHHHHH MISNLAWGRIADRHGYRLVFILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH AQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIATQLGYAPIFWMALAFKTLAL HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AMVLRIEEPRHRQRAGMRAC HHHHHCCCCHHHHHCCCCCC >Mature Secondary Structure MISHRDPNATATPDSSASDEARYDAQVLRDLPRNFAANLAHGMLGMTGFRLMSAPTFVPA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YIYMLSGSKLAVGLALGAQFLGMTLSSIWGATLIEHRNQVMRVVYAVGWLMRLQILGLAL HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAFVLSGSWALGAACVFLALFGFFGGVQGVTFNVLMSKVIPVTQRGRLTGMRNFLGGLTA HHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHH SGVAYLGGEYLVGSNAFGNGYASTFMLAFILTSIGISALAFVREPKSLTVRASPSRFMQR CCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHH LADVPGLLRADPHYRRFFFARALAALGTSAVPFYILHAGQFVRLSGATLGYFSLAFLLSQ HHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCEEEECCCHHHHHHHHHHHHH MISNLAWGRIADRHGYRLVFILGVCMWCGATLLLVLGGSLPLFLLAFCGLGAGFGGYQVA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHH AQNFVLEFGKAHELPMLIAISDTASHLMMAIGPLVGGIIATQLGYAPIFWMALAFKTLAL HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AMVLRIEEPRHRQRAGMRAC HHHHHCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA