| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611852
Identifier: 121611852
GI number: 121611852
Start: 5479800
End: 5480474
Strand: Direct
Name: 121611852
Synonym: Veis_4954
Alternate gene names: NA
Gene position: 5479800-5480474 (Clockwise)
Preceding gene: 121611851
Following gene: 121611853
Centisome position: 98.44
GC content: 75.11
Gene sequence:
>675_bases ATGACCGAATTCCTCCCCCACGGCCGCATCCGCCTGGCGCTGCACCGCCTGCAGCCCGCACGCGCGCCCGGCGCCCACCC TTTGCTGCTGCTGCACGCCCTGGGCGAGTCGCATGCCGCGCACCCTGCGTTCAGCTACGCCCAATGGCCCGGCGCCGTGC ACGCGCTGGACTTCACGGGCCATGGCGACTCCACCATCCCGGCCGGCGGCGGCTACAGCTGCGAGGTGCTGATGGGCGAC GTGGACATCGCGCTGGCCCACATCGGCCCGGCCACCGTCTGCGGCCGTGGCCTGGGCGCCTACATCGCGCTGCTGATCGC CGGCGGCCGGCCCGACCGTGTGCTCGGCGCCATCCTGCTCGACGGCCCCGGCATGGCCGGCAGTTGCGCCGCGTCCACGC CCTACATCCCGCTGGTGGACACCACGCAGCCCGCGCCGCCCGACCCCTTCGCGATCGCCGAGTTGGCCACCGACGCGCGC CCGCCCGAATACGCGGCCCACTTCGCGCGGCTGGCCTCGCAGCGCTCGCACCTGCCCCGGCCCATCACGGTCTGCACACG CGAGCAGCCGCCCTGGCTGCAGGCCGTCGTCGACGTGCTGGGCGGCGCACCGGTGGACCCCGCGAACGCCTGGCGCATGT ACGCCAGCGCCCTGCCCCAGCCCGTCCCGGCGTAA
Upstream 100 bases:
>100_bases CCCCCTCTGCACGCGGCCTGGCCATGGCCGACACCGGCCACTTCATCCACATCGAGCGCCCGCGTGAAACCGCCGACCTC GTCATCGATTTCCTGCGCAC
Downstream 100 bases:
>100_bases CCACGGCCTGCGGCCACCCCGCGCCGCAGGCGAAGCCGCCTGCACCGCGCAGGTGCTGCGCGACCTGCCGCGCAACTTCG CAGCCAACCTGGCGCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTEFLPHGRIRLALHRLQPARAPGAHPLLLLHALGESHAAHPAFSYAQWPGAVHALDFTGHGDSTIPAGGGYSCEVLMGD VDIALAHIGPATVCGRGLGAYIALLIAGGRPDRVLGAILLDGPGMAGSCAASTPYIPLVDTTQPAPPDPFAIAELATDAR PPEYAAHFARLASQRSHLPRPITVCTREQPPWLQAVVDVLGGAPVDPANAWRMYASALPQPVPA
Sequences:
>Translated_224_residues MTEFLPHGRIRLALHRLQPARAPGAHPLLLLHALGESHAAHPAFSYAQWPGAVHALDFTGHGDSTIPAGGGYSCEVLMGD VDIALAHIGPATVCGRGLGAYIALLIAGGRPDRVLGAILLDGPGMAGSCAASTPYIPLVDTTQPAPPDPFAIAELATDAR PPEYAAHFARLASQRSHLPRPITVCTREQPPWLQAVVDVLGGAPVDPANAWRMYASALPQPVPA >Mature_223_residues TEFLPHGRIRLALHRLQPARAPGAHPLLLLHALGESHAAHPAFSYAQWPGAVHALDFTGHGDSTIPAGGGYSCEVLMGDV DIALAHIGPATVCGRGLGAYIALLIAGGRPDRVLGAILLDGPGMAGSCAASTPYIPLVDTTQPAPPDPFAIAELATDARP PEYAAHFARLASQRSHLPRPITVCTREQPPWLQAVVDVLGGAPVDPANAWRMYASALPQPVPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23343; Mature: 23212
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFLPHGRIRLALHRLQPARAPGAHPLLLLHALGESHAAHPAFSYAQWPGAVHALDFTG CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHEEHHCCCCCCCCCCHHHHCCCCEEEEEECC HGDSTIPAGGGYSCEVLMGDVDIALAHIGPATVCGRGLGAYIALLIAGGRPDRVLGAILL CCCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEE DGPGMAGSCAASTPYIPLVDTTQPAPPDPFAIAELATDARPPEYAAHFARLASQRSHLPR CCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PITVCTREQPPWLQAVVDVLGGAPVDPANAWRMYASALPQPVPA CEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEFLPHGRIRLALHRLQPARAPGAHPLLLLHALGESHAAHPAFSYAQWPGAVHALDFTG CCCCCCCHHHHHHHHHCCCCCCCCCHHHHEEHHCCCCCCCCCCHHHHCCCCEEEEEECC HGDSTIPAGGGYSCEVLMGDVDIALAHIGPATVCGRGLGAYIALLIAGGRPDRVLGAILL CCCCCCCCCCCCEEEEEECCCEEEEECCCHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEE DGPGMAGSCAASTPYIPLVDTTQPAPPDPFAIAELATDARPPEYAAHFARLASQRSHLPR CCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC PITVCTREQPPWLQAVVDVLGGAPVDPANAWRMYASALPQPVPA CEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA