| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611845
Identifier: 121611845
GI number: 121611845
Start: 5471074
End: 5471286
Strand: Direct
Name: 121611845
Synonym: Veis_4947
Alternate gene names: NA
Gene position: 5471074-5471286 (Clockwise)
Preceding gene: 121611844
Following gene: 121611846
Centisome position: 98.28
GC content: 63.38
Gene sequence:
>213_bases ATGGCGTCCAACGACCCGGACTTCGAGACCAAGGCGGCCGATGTGATCGGGCTGTACCTCCATCCACCGGCGCACGCCGT GGTGTTCTGCGTCGATGAGAAGACCGCCATCCAGGCACTCGATCGCCAGGACCGGATGCTGCCGCTGTCGCCAGGGCGTG CCGAGAGCACCAGGTGGAGAACTGGTTCTCGCGCATTCAGCGTGATGTCATAA
Upstream 100 bases:
>100_bases CGCTGTTCGCGAGCCTGCGCAAGGACAGGGCGGCGGAGGACTGACCGGGGTCAGTTCGGATTGAAGCTGTCGCGGAAGGT GACAAAGACTGGATCGACAC
Downstream 100 bases:
>100_bases CCTGCGGCGGGTTTACCTCGGTGCAGGACTTGGGGCGAAAGCTGATGCGCTATATCCGCGAACACCACAAGAATCCCAAG CCCATCAAGTGGAAGTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: Feruloyl Esterase; Integrase Catalytic Region; Integrase Catalytic Subunit; ISBmu8 Transposase; ISMsm5 Transposase; ISRSO5-Transposase Protein
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MASNDPDFETKAADVIGLYLHPPAHAVVFCVDEKTAIQALDRQDRMLPLSPGRAESTRWRTGSRAFSVMS
Sequences:
>Translated_70_residues MASNDPDFETKAADVIGLYLHPPAHAVVFCVDEKTAIQALDRQDRMLPLSPGRAESTRWRTGSRAFSVMS >Mature_69_residues ASNDPDFETKAADVIGLYLHPPAHAVVFCVDEKTAIQALDRQDRMLPLSPGRAESTRWRTGSRAFSVMS
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7733; Mature: 7602
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASNDPDFETKAADVIGLYLHPPAHAVVFCVDEKTAIQALDRQDRMLPLSPGRAESTRWR CCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHCCCCCEECCCCCCCCCCEEC TGSRAFSVMS CCCCEEEECC >Mature Secondary Structure ASNDPDFETKAADVIGLYLHPPAHAVVFCVDEKTAIQALDRQDRMLPLSPGRAESTRWR CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHCCCCCEECCCCCCCCCCEEC TGSRAFSVMS CCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA