| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611844
Identifier: 121611844
GI number: 121611844
Start: 5469530
End: 5471017
Strand: Direct
Name: 121611844
Synonym: Veis_4946
Alternate gene names: NA
Gene position: 5469530-5471017 (Clockwise)
Preceding gene: 121611843
Following gene: 121611845
Centisome position: 98.25
GC content: 72.38
Gene sequence:
>1488_bases ATGACCGGCCATTCGATTCGCGTGATCCTCGTTGCGCTGGCGGCAGTGGCGAGCGTCGCCCAGGCGCAGCCAATCACCTC CGCACCCATCGCGCTGCAGGGCGCCGGACCGTACCACCGGCTGACGCTGCCGCTCGCCATCTACGGCCACGCCGCTCATG GCGACTTGAGCGACCTGCGGGTGCAGAACGCCGCCGGGCATGCGGTGCCCTATGCCTGGTTGCGCAACGAAGCAGCCGCA CCGCGCACAGCTTCGCAAGCGGTGCCGATCTTCGCGTTGCCCGGCAACGCCGCATCGGGTGACACCGCGATGGTTTTCAC CGTCCGCCCGGACGGCTCGCTGGCGTTGGACGGCAAGCCCGCCGCCAAGGCGAGCGAGGCAACGCAGTGGCTCATCGACG TGCGCCAGGTCGAGGGCCGCCTGCTGCAGGCGCGTTTCCAGGTCGCGCCCGATGCACGCGGCCTGTTCGCCTTCCGGCTG GAAGCCAGCGACGACCTGCGGCGATGGCGTCCGGTGGGGGGCGAGGAGCAACTGGTGCGCCTGGCCCATGGCGGCCAGAC CATCGAGCGGATGGCGGTCGAGCTGGGCAACCTGCACGCGCGCTTCCTGCGCCTGCGCTGGAGCGATCCACAGCATGGCG CGCCGCTCGCCAAGGTGGAAATCGACAGCGTGCAGGAGGTCGAGCCGGTGGCGCCGATCGAATGGTCCGGCGCGTTGAAG CCGGAGCGCTGCGCGGAAAACTACTGCGACTACCTGCTGCCGCGCGGCCTGCCGCTGCAGAGCCTGCGCATCGACCTGGC CGACATCAACACGCTGGCGCAGGTGGGCGTGTCGGGCCTGGTCGATGCCACGCCGGCTTCGGCGCCGCCGCCGCAGTTCG CGCCGCGCAACCCGCTCTACGCGTTGCGGCACCAGCAGCGCCGAACGAACCCGCTGCCCAGCGGCCCCGGCGAGGTGTCG CTGCTCGATACGGTGGTGTACCGCCTCGCGCAAGCCGGCGGCGAGGCGCGTTCGCCGGTGCTGGCGCTCGACGGCGCTGT GCATTCGCGTCTGCGGCTGCGCACTTCCGGCCCGGTGAGCGTGCTCGGCGCCACGCCGCCGACCATCGCCGTGGGGGCCA CGCCGCGCACGCTGGTATTTCTCGCGCAGGGCGGCGCGCCGTTCTCGCTGGCCTGGAGCGCGGTAGCCGACAAGGGGGCA GTGCAAGGTGCGGCGCCGGGTGCGCCGCTCGCGCTGTCCACGCTGATCCCGGGCCACGCCGCAGACAAGCCCATCGCAGC CGACGACGCCTCGGTCACGCTGCCGGTGGCTGCGGTGCAGGCCGTCGTCGCAGCCGCCACGCTCGCGCCCGTTCCCGCGA CGGCGCCGCACGATCCGTCGCGCAAATGGTGGCTCTGGGGTGCGCTGGGTATCGGCCTGCTGGCGCTCGCAGGCATGGCG GGGTCGCTGTTCGCGAGCCTGCGCAAGGACAGGGCGGCGGAGGACTGA
Upstream 100 bases:
>100_bases TCGGCGCGCTGCTGCTGCTGGTCGGGTACTTCGCGCCTGTGCCGCCGAAGAAACAAGAGGCGGGGCCGAAGGAAGAGGCG CCGGCTGAAGGAGGCGCGGC
Downstream 100 bases:
>100_bases CCGGGGTCAGTTCGGATTGAAGCTGTCGCGGAAGGTGACAAAGACTGGATCGACACATGGCGTCCAACGACCCGGACTTC GAGACCAAGGCGGCCGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MTGHSIRVILVALAAVASVAQAQPITSAPIALQGAGPYHRLTLPLAIYGHAAHGDLSDLRVQNAAGHAVPYAWLRNEAAA PRTASQAVPIFALPGNAASGDTAMVFTVRPDGSLALDGKPAAKASEATQWLIDVRQVEGRLLQARFQVAPDARGLFAFRL EASDDLRRWRPVGGEEQLVRLAHGGQTIERMAVELGNLHARFLRLRWSDPQHGAPLAKVEIDSVQEVEPVAPIEWSGALK PERCAENYCDYLLPRGLPLQSLRIDLADINTLAQVGVSGLVDATPASAPPPQFAPRNPLYALRHQQRRTNPLPSGPGEVS LLDTVVYRLAQAGGEARSPVLALDGAVHSRLRLRTSGPVSVLGATPPTIAVGATPRTLVFLAQGGAPFSLAWSAVADKGA VQGAAPGAPLALSTLIPGHAADKPIAADDASVTLPVAAVQAVVAAATLAPVPATAPHDPSRKWWLWGALGIGLLALAGMA GSLFASLRKDRAAED
Sequences:
>Translated_495_residues MTGHSIRVILVALAAVASVAQAQPITSAPIALQGAGPYHRLTLPLAIYGHAAHGDLSDLRVQNAAGHAVPYAWLRNEAAA PRTASQAVPIFALPGNAASGDTAMVFTVRPDGSLALDGKPAAKASEATQWLIDVRQVEGRLLQARFQVAPDARGLFAFRL EASDDLRRWRPVGGEEQLVRLAHGGQTIERMAVELGNLHARFLRLRWSDPQHGAPLAKVEIDSVQEVEPVAPIEWSGALK PERCAENYCDYLLPRGLPLQSLRIDLADINTLAQVGVSGLVDATPASAPPPQFAPRNPLYALRHQQRRTNPLPSGPGEVS LLDTVVYRLAQAGGEARSPVLALDGAVHSRLRLRTSGPVSVLGATPPTIAVGATPRTLVFLAQGGAPFSLAWSAVADKGA VQGAAPGAPLALSTLIPGHAADKPIAADDASVTLPVAAVQAVVAAATLAPVPATAPHDPSRKWWLWGALGIGLLALAGMA GSLFASLRKDRAAED >Mature_494_residues TGHSIRVILVALAAVASVAQAQPITSAPIALQGAGPYHRLTLPLAIYGHAAHGDLSDLRVQNAAGHAVPYAWLRNEAAAP RTASQAVPIFALPGNAASGDTAMVFTVRPDGSLALDGKPAAKASEATQWLIDVRQVEGRLLQARFQVAPDARGLFAFRLE ASDDLRRWRPVGGEEQLVRLAHGGQTIERMAVELGNLHARFLRLRWSDPQHGAPLAKVEIDSVQEVEPVAPIEWSGALKP ERCAENYCDYLLPRGLPLQSLRIDLADINTLAQVGVSGLVDATPASAPPPQFAPRNPLYALRHQQRRTNPLPSGPGEVSL LDTVVYRLAQAGGEARSPVLALDGAVHSRLRLRTSGPVSVLGATPPTIAVGATPRTLVFLAQGGAPFSLAWSAVADKGAV QGAAPGAPLALSTLIPGHAADKPIAADDASVTLPVAAVQAVVAAATLAPVPATAPHDPSRKWWLWGALGIGLLALAGMAG SLFASLRKDRAAED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51735; Mature: 51603
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGHSIRVILVALAAVASVAQAQPITSAPIALQGAGPYHRLTLPLAIYGHAAHGDLSDLR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCHHHHE VQNAAGHAVPYAWLRNEAAAPRTASQAVPIFALPGNAASGDTAMVFTVRPDGSLALDGKP EECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEECCCC AAKASEATQWLIDVRQVEGRLLQARFQVAPDARGLFAFRLEASDDLRRWRPVGGEEQLVR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHHH LAHGGQTIERMAVELGNLHARFLRLRWSDPQHGAPLAKVEIDSVQEVEPVAPIEWSGALK HHCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCC PERCAENYCDYLLPRGLPLQSLRIDLADINTLAQVGVSGLVDATPASAPPPQFAPRNPLY HHHHHHHHHHHHCCCCCCHHHHEEEHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCHH ALRHQQRRTNPLPSGPGEVSLLDTVVYRLAQAGGEARSPVLALDGAVHSRLRLRTSGPVS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCEEEEECCCCEE VLGATPPTIAVGATPRTLVFLAQGGAPFSLAWSAVADKGAVQGAAPGAPLALSTLIPGHA EECCCCCEEEECCCCCEEEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCEEHHHHCCCCC ADKPIAADDASVTLPVAAVQAVVAAATLAPVPATAPHDPSRKWWLWGALGIGLLALAGMA CCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH GSLFASLRKDRAAED HHHHHHHHHHCCCCC >Mature Secondary Structure TGHSIRVILVALAAVASVAQAQPITSAPIALQGAGPYHRLTLPLAIYGHAAHGDLSDLR CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCHHHHE VQNAAGHAVPYAWLRNEAAAPRTASQAVPIFALPGNAASGDTAMVFTVRPDGSLALDGKP EECCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEECCCC AAKASEATQWLIDVRQVEGRLLQARFQVAPDARGLFAFRLEASDDLRRWRPVGGEEQLVR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCHHHHHH LAHGGQTIERMAVELGNLHARFLRLRWSDPQHGAPLAKVEIDSVQEVEPVAPIEWSGALK HHCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCC PERCAENYCDYLLPRGLPLQSLRIDLADINTLAQVGVSGLVDATPASAPPPQFAPRNPLY HHHHHHHHHHHHCCCCCCHHHHEEEHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCCCHH ALRHQQRRTNPLPSGPGEVSLLDTVVYRLAQAGGEARSPVLALDGAVHSRLRLRTSGPVS HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCEEEEECCCCEE VLGATPPTIAVGATPRTLVFLAQGGAPFSLAWSAVADKGAVQGAAPGAPLALSTLIPGHA EECCCCCEEEECCCCCEEEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCEEHHHHCCCCC ADKPIAADDASVTLPVAAVQAVVAAATLAPVPATAPHDPSRKWWLWGALGIGLLALAGMA CCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH GSLFASLRKDRAAED HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA