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The map label for this gene is tolR [H]

Identifier: 121611698

GI number: 121611698

Start: 5294541

End: 5294963

Strand: Direct

Name: tolR [H]

Synonym: Veis_4795

Alternate gene names: 121611698

Gene position: 5294541-5294963 (Clockwise)

Preceding gene: 121611697

Following gene: 121611699

Centisome position: 95.11

GC content: 66.67

Gene sequence:

>423_bases
ATGCCTGCCATCGCCACCCGCGGCCGAGGCCGCCGTACCATCAACGAGATCAACATGGTGCCGTTCATCGACGTGATGCT
GGTGCTGCTGATCATCTTCATCGTGACGGCCCCCATGTTCACCCCGGGCATGATCGGCGTGCCCCGCGTGGGCCAGAGCA
TGAACCCGCCCAAAGTGGTGGCGCAGCTCATCGTCCACCGGGACGGCGCGCTCCAGTGGCGCACCGCCCAAGCCACGCTG
CGCCTGAGCCTGCGCGAGATCGGCGCTGCCGCCGTGCGCTGGCAAGCAGACCAGGGGCCGGACAGCGCCGTGCTCATCAG
CGCCGACAAAGGCGTGCAATACGATACCGTGGTCAAGGCCATGGATGCGCTGCAAAAAGCCGGCGTGCAACGGGTCGGAC
TGCTCGTGCAGCAAGGCGGTTGA

Upstream 100 bases:

>100_bases
ACCTTCATCGAGGAGTTCTCCAACATCCTGCAACGCAATCTGGGCGCCCATGTCGCCCATGCCGCAGCCCCGGGCCACTG
AGCACAGGAAAACCGCCGCC

Downstream 100 bases:

>100_bases
ACCGAACCCGCCCCGTGTAGCTCAGACGCCCATGCATGCCCACGACGACCGCGACCAGTTTGCCCCGCCCCGCCCGCCGG
CGCATCTGCGCGCAATCGTG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPAIATRGRGRRTINEINMVPFIDVMLVLLIIFIVTAPMFTPGMIGVPRVGQSMNPPKVVAQLIVHRDGALQWRTAQATL
RLSLREIGAAAVRWQADQGPDSAVLISADKGVQYDTVVKAMDALQKAGVQRVGLLVQQGG

Sequences:

>Translated_140_residues
MPAIATRGRGRRTINEINMVPFIDVMLVLLIIFIVTAPMFTPGMIGVPRVGQSMNPPKVVAQLIVHRDGALQWRTAQATL
RLSLREIGAAAVRWQADQGPDSAVLISADKGVQYDTVVKAMDALQKAGVQRVGLLVQQGG
>Mature_139_residues
PAIATRGRGRRTINEINMVPFIDVMLVLLIIFIVTAPMFTPGMIGVPRVGQSMNPPKVVAQLIVHRDGALQWRTAQATLR
LSLREIGAAAVRWQADQGPDSAVLISADKGVQYDTVVKAMDALQKAGVQRVGLLVQQGG

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=127, Percent_Identity=33.8582677165354, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15097; Mature: 14966

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIATRGRGRRTINEINMVPFIDVMLVLLIIFIVTAPMFTPGMIGVPRVGQSMNPPKVV
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
AQLIVHRDGALQWRTAQATLRLSLREIGAAAVRWQADQGPDSAVLISADKGVQYDTVVKA
HHHHHHCCCCCEEEHHHHHHHHHHHHHCHHHEEECCCCCCCCEEEEECCCCCCHHHHHHH
MDALQKAGVQRVGLLVQQGG
HHHHHHCCHHHHHHHEECCC
>Mature Secondary Structure 
PAIATRGRGRRTINEINMVPFIDVMLVLLIIFIVTAPMFTPGMIGVPRVGQSMNPPKVV
CCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
AQLIVHRDGALQWRTAQATLRLSLREIGAAAVRWQADQGPDSAVLISADKGVQYDTVVKA
HHHHHHCCCCCEEEHHHHHHHHHHHHHCHHHEEECCCCCCCCEEEEECCCCCCHHHHHHH
MDALQKAGVQRVGLLVQQGG
HHHHHHCCHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]