| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is livK [C]
Identifier: 121611607
GI number: 121611607
Start: 5187731
End: 5189029
Strand: Direct
Name: livK [C]
Synonym: Veis_4699
Alternate gene names: 121611607
Gene position: 5187731-5189029 (Clockwise)
Preceding gene: 121611605
Following gene: 121611608
Centisome position: 93.19
GC content: 64.13
Gene sequence:
>1299_bases ATGACCCAGCGCTCTTTTCCGCCCCTGCAGCCGCAGGCATCGTCGACCCGCGCGCCATCCACGAGCCGTCGCCGTCTGAT GACTGGTTCGGCTGCGATGGCAGGCGTTGCCGCGCTGGAGGTCCTCGGATTTCCATCCATCGTCTACGCGCAATCGGACA AGATCCGGATCGGTCACCTGACGCCGCGCACCGGCTTTCTCGGCCCGCTGGGTGAATATGCAGTGATGGGCATCTCGCTC GCTGTGGAGGAGATCAATGCCACCGGCGGCGTGCTGGGTCGGCCGTTGGAATTGATCGCCGAGGATTCGGTCAATCCGTC TACGGCTTCGTCGAAAGCGCAGCGACTGCTGGAGCGCGACGGCGCGGTAGTGTTGATCGGCGAGATCTCCTCAGCCTCGG GCCTGGCCATTTCCCAGGTGGCAACCCGCAATCGACGCATCTTCGTGAACACCGGCTGCAATTCGGACGAGCTGCGCGGC AAGAACTGCAGCCGCTACATGTTCCACGTCGAGGCCGCCAACACCACATACGTGAAGGCCTGCGGCGGCGCGCTGCTGCG CGACAACATGATCAAAGGCAAGAAGCTGTTCGGACTGACGGCCGACTATGCGTTCGGCCACGACCTGCTGAAGGCGGCCA AGCGCTTCGTGACGGCCAACGGCGGCAGCTTCGTACAGGACGAATTGGTCGCCACCGATGCCACCGACTTCAGCCCTTAT CTTCTGAAGATCCGCCAAGCGAAACCCGATGTGGTGGTCTCCAACCTGTCGGGCAACCAGATCACCAACTTCATCAAGCA GTACGCGGAGTTCGGCCTACCCTATCCGATCGCCGGCTTCGCGCTGGACACGGCGCTGGCCTGGGGCGCCGGCGCCGACA ACTTCGCCGGCATCTGGCCCCTGACCTGGCACCACGAGGTGCCGGCCCCAGCGGCCCAGGCATTCGTGGCAGCCTTCGTC AAGAAGTACGGCAGGCCGCCGGAGAACCAGGCCTGGGGCGAATACGTGGCCCTCAAGGCCATGGTGCAGGCGATGGCCGA GACCAAGGGCACCGATCCGGCCAAGATGATCGAGTACTTCGAGAAGGGCGCGCCGATCGAAGTGCTCAAGGCCCGCAAGG GCAGTTTCCGAGCCTGGGACCACCAGTTGCTGCAGGAGATGTATACCGTCCGCCCCAAGCCGAAGACCCAGGTCAAGGAC AAGTGGGGCTTCATGGCTGTGGATGCGGCCGTGCCGGCTGCCAGTGCTGCGCTAGAGACCCTGGCGCCCACGCGTGAAGA GAACGCCTGCACGTTGTAG
Upstream 100 bases:
>100_bases TCCCTGAATTCTCAGATGAATTTTGCGCTATGGGTTGCACTATCAAATCCAGAGTAATATATTTGATCACATCGATCATT CATGCAACCCGGAGACAACC
Downstream 100 bases:
>100_bases CCGTCCCCGCCGCTCGCGGGTGGGCAGCCCGCGCCTTCCGCGCAGTACCCACCAACGGCGGGCTCGCCGGGGCATCGGTC GCATTGCGCATGCCTGGAAT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTQRSFPPLQPQASSTRAPSTSRRRLMTGSAAMAGVAALEVLGFPSIVYAQSDKIRIGHLTPRTGFLGPLGEYAVMGISL AVEEINATGGVLGRPLELIAEDSVNPSTASSKAQRLLERDGAVVLIGEISSASGLAISQVATRNRRIFVNTGCNSDELRG KNCSRYMFHVEAANTTYVKACGGALLRDNMIKGKKLFGLTADYAFGHDLLKAAKRFVTANGGSFVQDELVATDATDFSPY LLKIRQAKPDVVVSNLSGNQITNFIKQYAEFGLPYPIAGFALDTALAWGAGADNFAGIWPLTWHHEVPAPAAQAFVAAFV KKYGRPPENQAWGEYVALKAMVQAMAETKGTDPAKMIEYFEKGAPIEVLKARKGSFRAWDHQLLQEMYTVRPKPKTQVKD KWGFMAVDAAVPAASAALETLAPTREENACTL
Sequences:
>Translated_432_residues MTQRSFPPLQPQASSTRAPSTSRRRLMTGSAAMAGVAALEVLGFPSIVYAQSDKIRIGHLTPRTGFLGPLGEYAVMGISL AVEEINATGGVLGRPLELIAEDSVNPSTASSKAQRLLERDGAVVLIGEISSASGLAISQVATRNRRIFVNTGCNSDELRG KNCSRYMFHVEAANTTYVKACGGALLRDNMIKGKKLFGLTADYAFGHDLLKAAKRFVTANGGSFVQDELVATDATDFSPY LLKIRQAKPDVVVSNLSGNQITNFIKQYAEFGLPYPIAGFALDTALAWGAGADNFAGIWPLTWHHEVPAPAAQAFVAAFV KKYGRPPENQAWGEYVALKAMVQAMAETKGTDPAKMIEYFEKGAPIEVLKARKGSFRAWDHQLLQEMYTVRPKPKTQVKD KWGFMAVDAAVPAASAALETLAPTREENACTL >Mature_431_residues TQRSFPPLQPQASSTRAPSTSRRRLMTGSAAMAGVAALEVLGFPSIVYAQSDKIRIGHLTPRTGFLGPLGEYAVMGISLA VEEINATGGVLGRPLELIAEDSVNPSTASSKAQRLLERDGAVVLIGEISSASGLAISQVATRNRRIFVNTGCNSDELRGK NCSRYMFHVEAANTTYVKACGGALLRDNMIKGKKLFGLTADYAFGHDLLKAAKRFVTANGGSFVQDELVATDATDFSPYL LKIRQAKPDVVVSNLSGNQITNFIKQYAEFGLPYPIAGFALDTALAWGAGADNFAGIWPLTWHHEVPAPAAQAFVAAFVK KYGRPPENQAWGEYVALKAMVQAMAETKGTDPAKMIEYFEKGAPIEVLKARKGSFRAWDHQLLQEMYTVRPKPKTQVKDK WGFMAVDAAVPAASAALETLAPTREENACTL
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 46564; Mature: 46433
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRSFPPLQPQASSTRAPSTSRRRLMTGSAAMAGVAALEVLGFPSIVYAQSDKIRIGHL CCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEE TPRTGFLGPLGEYAVMGISLAVEEINATGGVLGRPLELIAEDSVNPSTASSKAQRLLERD CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCC GAVVLIGEISSASGLAISQVATRNRRIFVNTGCNSDELRGKNCSRYMFHVEAANTTYVKA CCEEEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEHH CGGALLRDNMIKGKKLFGLTADYAFGHDLLKAAKRFVTANGGSFVQDELVATDATDFSPY HCCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCHH LLKIRQAKPDVVVSNLSGNQITNFIKQYAEFGLPYPIAGFALDTALAWGAGADNFAGIWP HHEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LTWHHEVPAPAAQAFVAAFVKKYGRPPENQAWGEYVALKAMVQAMAETKGTDPAKMIEYF EEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EKGAPIEVLKARKGSFRAWDHQLLQEMYTVRPKPKTQVKDKWGFMAVDAAVPAASAALET HCCCCEEEHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEHHHCCHHHHHHHH LAPTREENACTL HCCCCCCCCCCC >Mature Secondary Structure TQRSFPPLQPQASSTRAPSTSRRRLMTGSAAMAGVAALEVLGFPSIVYAQSDKIRIGHL CCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEEE TPRTGFLGPLGEYAVMGISLAVEEINATGGVLGRPLELIAEDSVNPSTASSKAQRLLERD CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHCC GAVVLIGEISSASGLAISQVATRNRRIFVNTGCNSDELRGKNCSRYMFHVEAANTTYVKA CCEEEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEHH CGGALLRDNMIKGKKLFGLTADYAFGHDLLKAAKRFVTANGGSFVQDELVATDATDFSPY HCCHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCHH LLKIRQAKPDVVVSNLSGNQITNFIKQYAEFGLPYPIAGFALDTALAWGAGADNFAGIWP HHEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC LTWHHEVPAPAAQAFVAAFVKKYGRPPENQAWGEYVALKAMVQAMAETKGTDPAKMIEYF EEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EKGAPIEVLKARKGSFRAWDHQLLQEMYTVRPKPKTQVKDKWGFMAVDAAVPAASAALET HCCCCEEEHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEHHHCCHHHHHHHH LAPTREENACTL HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA