Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611548

Identifier: 121611548

GI number: 121611548

Start: 5132947

End: 5133903

Strand: Direct

Name: 121611548

Synonym: Veis_4640

Alternate gene names: NA

Gene position: 5132947-5133903 (Clockwise)

Preceding gene: 121611546

Following gene: 121611549

Centisome position: 92.21

GC content: 61.02

Gene sequence:

>957_bases
ATGAAGTTGGTCAAAGGACTGCTGCTAGCGGCTACCCTCGTTGGGCAAGCAGCTTTAGCGCAGAGCACAGGCGATTACCC
CAACAAACACGTTCGACTCGTCGTGCCTTTCGGCGCGGGTAGCGCGTCCGACACGGTCGCACGCATCGTGGCGGAGGAGG
TGCGGAGCAGGATGGGCGTTGTCATCGTGGACAACAAGCAGGGTGCCAACGGAATCATCGGTGCGGGCAGCGTCGCCAAG
GCCGTGCCAGATGGCTATACGCTGCTGCTGACTAGCAGTTCCACCCATTCGGGTATTGGTGCGCTCTTCAAGCAACCTGG
CTACGATCCTCTCAAGGACTTCGTGCATATTGGGCGCATTGCCACCATCCCGATGATCCTGGTGGTGCGGCCAGATGCAC
CCTTCAATTCGGCGCAGGAACTCGCGACCCAGGCCCGCAAAACCCCGCTGCGCTACGCCTATGGCAGCGGTTCGGCTCAG
ATCGCAGGTGCAACCTTCAGCATCGTCGCCAATGCGCCTTCTGACGCGATTCCCTATAAGAGTCAGCCGCCGGCGATCAC
GGATTTGCTGGGCGGTCAGGTCGACTACGTGTTGGCTGATGCCTCGGTGGTGACTAGCTTTTTACGTGCTGGACGTCTCC
GAGGTCTAGCGATAACGGGCCTGCAGCGTGCGAAAGACCTACCTGAGGTACCTACGATGACACAAGCCGGCTATCCCAGT
TTCGACTTGGTGGTCTGGGTGGGACTGGCCGCCCCGGCCGGTACACCCGAGCCGATCGTGGTGCTGTGGAACAAGGAGGT
CGCCTCGGCCCTGTCCAAACCGGAGGTAGTAGCCAAGCTCGCCCGCCTGGGTATGGTTGCCAGCCCAAATACGCAGCAGC
AGCAGGCAGAATTCGCATTGGCTCAGCGCGACATATGGGTGACGCGCGCGGCCAAGGCGGGAATTCAGGCGGAATGA

Upstream 100 bases:

>100_bases
GCTACGCTCCGATGGCTGCGCGCAGCCTACGACATCTGATCGGTGACGCGACACTAGCCTGTCGTATCTAGCATCGCATT
TCGATTCTGGAGACAAGTAC

Downstream 100 bases:

>100_bases
ACGCGCACTCGACAAAGGCGCTCGCCGGCATCCGTGCTGGACCTCACTTCCGTCATCATGGGGTCAGTGTGCACTCAGAT
TCTCGCGGACTAGCAGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKLVKGLLLAATLVGQAALAQSTGDYPNKHVRLVVPFGAGSASDTVARIVAEEVRSRMGVVIVDNKQGANGIIGAGSVAK
AVPDGYTLLLTSSSTHSGIGALFKQPGYDPLKDFVHIGRIATIPMILVVRPDAPFNSAQELATQARKTPLRYAYGSGSAQ
IAGATFSIVANAPSDAIPYKSQPPAITDLLGGQVDYVLADASVVTSFLRAGRLRGLAITGLQRAKDLPEVPTMTQAGYPS
FDLVVWVGLAAPAGTPEPIVVLWNKEVASALSKPEVVAKLARLGMVASPNTQQQQAEFALAQRDIWVTRAAKAGIQAE

Sequences:

>Translated_318_residues
MKLVKGLLLAATLVGQAALAQSTGDYPNKHVRLVVPFGAGSASDTVARIVAEEVRSRMGVVIVDNKQGANGIIGAGSVAK
AVPDGYTLLLTSSSTHSGIGALFKQPGYDPLKDFVHIGRIATIPMILVVRPDAPFNSAQELATQARKTPLRYAYGSGSAQ
IAGATFSIVANAPSDAIPYKSQPPAITDLLGGQVDYVLADASVVTSFLRAGRLRGLAITGLQRAKDLPEVPTMTQAGYPS
FDLVVWVGLAAPAGTPEPIVVLWNKEVASALSKPEVVAKLARLGMVASPNTQQQQAEFALAQRDIWVTRAAKAGIQAE
>Mature_318_residues
MKLVKGLLLAATLVGQAALAQSTGDYPNKHVRLVVPFGAGSASDTVARIVAEEVRSRMGVVIVDNKQGANGIIGAGSVAK
AVPDGYTLLLTSSSTHSGIGALFKQPGYDPLKDFVHIGRIATIPMILVVRPDAPFNSAQELATQARKTPLRYAYGSGSAQ
IAGATFSIVANAPSDAIPYKSQPPAITDLLGGQVDYVLADASVVTSFLRAGRLRGLAITGLQRAKDLPEVPTMTQAGYPS
FDLVVWVGLAAPAGTPEPIVVLWNKEVASALSKPEVVAKLARLGMVASPNTQQQQAEFALAQRDIWVTRAAKAGIQAE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33203; Mature: 33203

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVKGLLLAATLVGQAALAQSTGDYPNKHVRLVVPFGAGSASDTVARIVAEEVRSRMGV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCE
VIVDNKQGANGIIGAGSVAKAVPDGYTLLLTSSSTHSGIGALFKQPGYDPLKDFVHIGRI
EEEECCCCCCCEEECCHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHCHH
ATIPMILVVRPDAPFNSAQELATQARKTPLRYAYGSGSAQIAGATFSIVANAPSDAIPYK
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEECEEEEEEECCCCCCCCCC
SQPPAITDLLGGQVDYVLADASVVTSFLRAGRLRGLAITGLQRAKDLPEVPTMTQAGYPS
CCCCHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCC
FDLVVWVGLAAPAGTPEPIVVLWNKEVASALSKPEVVAKLARLGMVASPNTQQQQAEFAL
EEEEEEEEECCCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
AQRDIWVTRAAKAGIQAE
HHHHHHEEHHHCCCCCCC
>Mature Secondary Structure
MKLVKGLLLAATLVGQAALAQSTGDYPNKHVRLVVPFGAGSASDTVARIVAEEVRSRMGV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCE
VIVDNKQGANGIIGAGSVAKAVPDGYTLLLTSSSTHSGIGALFKQPGYDPLKDFVHIGRI
EEEECCCCCCCEEECCHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHCHH
ATIPMILVVRPDAPFNSAQELATQARKTPLRYAYGSGSAQIAGATFSIVANAPSDAIPYK
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEECEEEEEEECCCCCCCCCC
SQPPAITDLLGGQVDYVLADASVVTSFLRAGRLRGLAITGLQRAKDLPEVPTMTQAGYPS
CCCCHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCC
FDLVVWVGLAAPAGTPEPIVVLWNKEVASALSKPEVVAKLARLGMVASPNTQQQQAEFAL
EEEEEEEEECCCCCCCCCEEEEECHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
AQRDIWVTRAAKAGIQAE
HHHHHHEEHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]