| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611546
Identifier: 121611546
GI number: 121611546
Start: 5130960
End: 5131940
Strand: Direct
Name: 121611546
Synonym: Veis_4638
Alternate gene names: NA
Gene position: 5130960-5131940 (Clockwise)
Preceding gene: 121611545
Following gene: 121611548
Centisome position: 92.17
GC content: 67.69
Gene sequence:
>981_bases ATGACCACAATGAACCGCCGACACCTTCTCGCCACCGCTGCAGCCGGTCTGGCACTTCCCTGGAGCGCGTCGAGCCACGC ACAGGCATGGCCGGCGCGGCCGATCCGCATGGTCTCTCCCTACGGTGCAGGTGGGTCGAACGACATCCTGACGCGTGTGC TGGGCGACTTCCTCGGCCGACGGCTCGGCCAGGGCATCATCATCGAGAACAAGGCCGGTGCCGGCACGCGCATTGCCAAC GACTTCGTGGCCAAGGCGCCGGCAGACGGCTACACGCTGCTCCACGCGGCCGCACCGATTGCCATCGGCGAGGCGCTGTA CAAGGGCCTGCCGTACGACGTGCACAAGAACTTCGCTTCGATCGCCAGCACGGCCATCGCGCCCTTGTTCCTGGTAGTCA ATGCCAACGCGCCGTACAAGACGGTCGCAGAGTTCATCGAGCAGATGAAGGCCGACCCGAAGGGCGCGACCTTCGGATCG CCGGGGGCGGGCTCCGCGCCGCACCTGACGGCCGAGTTCCTGTTGCGCGCATCCGGCACGAAGGGCATCGTGGTGCAGTA CCGCGGCGATGCGCCGGCCTACACCGAGCTCCTGGCCGGGCGGATTGACGCCACCTTGACGGCGATTTCGACCGCAATTC CCCACATCCAGGCCGGCAAGCTGCGGGTACTGGGCGTGGCCACAGAAGAGCGCTCGCCGCTATACCCGAGCGCGCCGACT TTCAGGGAGCAGGGCCTGCCTTCCGTCGTGGGCTATGGCTGGTACGGCATGCTCGCGCCGGCCGGAACGCCGGCCCCCAT CGTCGAGCGGCTGAATGCGGAGATCAACGCGGCGGTGGCCGACGCGGATGTCCGCCGCAAGGCCGAGGCGGCGGGACTGC AACTGCGTGGCGGCAGCGCCGCCGAGTTCAGTGCATTCATTGCCAGCGAGACGCGCAAGTGGGCGCAGATCATCAAGGCC GCGAACATCACGGCCGAATGA
Upstream 100 bases:
>100_bases GCGGCTGTATCAACCGCATGCCGACCATCTGGAACTGCGATTCGACTACCCGCCGATCCAGCCGATCTGACACCCACAAA ATCAACGGAAACACGCACGC
Downstream 100 bases:
>100_bases GGAGCGCGATGCCTTGGGTACAGCTATGGACTGCACGTGCAGAGGTTGAGCCCTCCTGCGTTGGTTGCTCCCGGGATGCG CCCGATTGGAGTACGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGRRLGQGIIIENKAGAGTRIAN DFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFASIASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGS PGAGSAPHLTAEFLLRASGTKGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSAAEFSAFIASETRKWAQIIKA ANITAE
Sequences:
>Translated_326_residues MTTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGRRLGQGIIIENKAGAGTRIAN DFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFASIASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGS PGAGSAPHLTAEFLLRASGTKGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSAAEFSAFIASETRKWAQIIKA ANITAE >Mature_325_residues TTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGRRLGQGIIIENKAGAGTRIAND FVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFASIASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGSP GAGSAPHLTAEFLLRASGTKGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPTF REQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSAAEFSAFIASETRKWAQIIKAA NITAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34066; Mature: 33935
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGR CCCCCHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH RLGQGIIIENKAGAGTRIANDFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFAS HHCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH IASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGSPGAGSAPHLTAEFLLRASGT HHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC KGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCC FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSA HHHCCCCHHHCCCCHHHCCCCCCCHHHHHHHCCHHHHEECCHHHHHHHHHCCEEECCCCC AEFSAFIASETRKWAQIIKAANITAE HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGR CCCCHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH RLGQGIIIENKAGAGTRIANDFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFAS HHCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH IASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGSPGAGSAPHLTAEFLLRASGT HHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC KGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCC FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSA HHHCCCCHHHCCCCHHHCCCCCCCHHHHHHHCCHHHHEECCHHHHHHHHHCCEEECCCCC AEFSAFIASETRKWAQIIKAANITAE HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]