Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611546

Identifier: 121611546

GI number: 121611546

Start: 5130960

End: 5131940

Strand: Direct

Name: 121611546

Synonym: Veis_4638

Alternate gene names: NA

Gene position: 5130960-5131940 (Clockwise)

Preceding gene: 121611545

Following gene: 121611548

Centisome position: 92.17

GC content: 67.69

Gene sequence:

>981_bases
ATGACCACAATGAACCGCCGACACCTTCTCGCCACCGCTGCAGCCGGTCTGGCACTTCCCTGGAGCGCGTCGAGCCACGC
ACAGGCATGGCCGGCGCGGCCGATCCGCATGGTCTCTCCCTACGGTGCAGGTGGGTCGAACGACATCCTGACGCGTGTGC
TGGGCGACTTCCTCGGCCGACGGCTCGGCCAGGGCATCATCATCGAGAACAAGGCCGGTGCCGGCACGCGCATTGCCAAC
GACTTCGTGGCCAAGGCGCCGGCAGACGGCTACACGCTGCTCCACGCGGCCGCACCGATTGCCATCGGCGAGGCGCTGTA
CAAGGGCCTGCCGTACGACGTGCACAAGAACTTCGCTTCGATCGCCAGCACGGCCATCGCGCCCTTGTTCCTGGTAGTCA
ATGCCAACGCGCCGTACAAGACGGTCGCAGAGTTCATCGAGCAGATGAAGGCCGACCCGAAGGGCGCGACCTTCGGATCG
CCGGGGGCGGGCTCCGCGCCGCACCTGACGGCCGAGTTCCTGTTGCGCGCATCCGGCACGAAGGGCATCGTGGTGCAGTA
CCGCGGCGATGCGCCGGCCTACACCGAGCTCCTGGCCGGGCGGATTGACGCCACCTTGACGGCGATTTCGACCGCAATTC
CCCACATCCAGGCCGGCAAGCTGCGGGTACTGGGCGTGGCCACAGAAGAGCGCTCGCCGCTATACCCGAGCGCGCCGACT
TTCAGGGAGCAGGGCCTGCCTTCCGTCGTGGGCTATGGCTGGTACGGCATGCTCGCGCCGGCCGGAACGCCGGCCCCCAT
CGTCGAGCGGCTGAATGCGGAGATCAACGCGGCGGTGGCCGACGCGGATGTCCGCCGCAAGGCCGAGGCGGCGGGACTGC
AACTGCGTGGCGGCAGCGCCGCCGAGTTCAGTGCATTCATTGCCAGCGAGACGCGCAAGTGGGCGCAGATCATCAAGGCC
GCGAACATCACGGCCGAATGA

Upstream 100 bases:

>100_bases
GCGGCTGTATCAACCGCATGCCGACCATCTGGAACTGCGATTCGACTACCCGCCGATCCAGCCGATCTGACACCCACAAA
ATCAACGGAAACACGCACGC

Downstream 100 bases:

>100_bases
GGAGCGCGATGCCTTGGGTACAGCTATGGACTGCACGTGCAGAGGTTGAGCCCTCCTGCGTTGGTTGCTCCCGGGATGCG
CCCGATTGGAGTACGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGRRLGQGIIIENKAGAGTRIAN
DFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFASIASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGS
PGAGSAPHLTAEFLLRASGTKGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT
FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSAAEFSAFIASETRKWAQIIKA
ANITAE

Sequences:

>Translated_326_residues
MTTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGRRLGQGIIIENKAGAGTRIAN
DFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFASIASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGS
PGAGSAPHLTAEFLLRASGTKGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT
FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSAAEFSAFIASETRKWAQIIKA
ANITAE
>Mature_325_residues
TTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGRRLGQGIIIENKAGAGTRIAND
FVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFASIASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGSP
GAGSAPHLTAEFLLRASGTKGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPTF
REQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSAAEFSAFIASETRKWAQIIKAA
NITAE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34066; Mature: 33935

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGR
CCCCCHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
RLGQGIIIENKAGAGTRIANDFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFAS
HHCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH
IASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGSPGAGSAPHLTAEFLLRASGT
HHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
KGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCC
FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSA
HHHCCCCHHHCCCCHHHCCCCCCCHHHHHHHCCHHHHEECCHHHHHHHHHCCEEECCCCC
AEFSAFIASETRKWAQIIKAANITAE
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTMNRRHLLATAAAGLALPWSASSHAQAWPARPIRMVSPYGAGGSNDILTRVLGDFLGR
CCCCHHHHHHHHHCCEECCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
RLGQGIIIENKAGAGTRIANDFVAKAPADGYTLLHAAAPIAIGEALYKGLPYDVHKNFAS
HHCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHH
IASTAIAPLFLVVNANAPYKTVAEFIEQMKADPKGATFGSPGAGSAPHLTAEFLLRASGT
HHHHHHCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
KGIVVQYRGDAPAYTELLAGRIDATLTAISTAIPHIQAGKLRVLGVATEERSPLYPSAPT
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCC
FREQGLPSVVGYGWYGMLAPAGTPAPIVERLNAEINAAVADADVRRKAEAAGLQLRGGSA
HHHCCCCHHHCCCCHHHCCCCCCCHHHHHHHCCHHHHEECCHHHHHHHHHCCEEECCCCC
AEFSAFIASETRKWAQIIKAANITAE
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]