Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611545

Identifier: 121611545

GI number: 121611545

Start: 5129664

End: 5130929

Strand: Direct

Name: 121611545

Synonym: Veis_4637

Alternate gene names: NA

Gene position: 5129664-5130929 (Clockwise)

Preceding gene: 121611544

Following gene: 121611546

Centisome position: 92.15

GC content: 68.56

Gene sequence:

>1266_bases
ATGAATTCGAAGATCGTTCCCCTCGCGCACGGTTGCGACGCCGTCGTGATCCAGACGCTACCGCTGTTCGAGATGATGCG
GATGCGCGCAGCGACCACCGCGCGCCGACACCCCGTGCTCGGGTTCGCTGCGCCGGATGCAGCGTCGGCCATGCGGTGGG
TCAACCAGTTCACCCACACGCACCGTCGCCTCGGCCCGGAAGACAAAGAGGTCGTCAGCCCCAACAACGACACGGTCTAC
AGCAATGCCTGGCTCGACCTGTCCGAAAGGCCGGTCGTCATCGAATCGCCCGAGATGGGCGACCGCTACTGGACCCTCGG
CCTGCTGGACGCGTGGACGAATCCCTTCGCCTACGTCGGGCGCCGCACGACGGGTAACAGGCCCCAACGCACGCTGGTGC
ATGGCCCCGCGTGGCGTGGCGTCGTCCCTGTGGACATCACGCAGACGATTGCCGCACCGGGCGATGACGTGTGGCTGATC
GGGCGCCATCTCGTGGAGGACGACGGCGAAGACGCGGCGCGCGTGCGCGAGACACAAGCCCAGATGCGGCTCGTGCGCCT
GGATGGCAGCGACGCGGCGATGCGGGTGGACACGTGGATGGACGGGCGCGATGCTGGCACGCCGGCTGCCGACCTGTACC
TGTCGATCACGAGCGCTGCGCTGCGGCGCAATCCGCCGATGGCAGGGGAGTGCCAGGCGTGGCCTCCTGCCGCGGCCGAG
CTTGAGGCGTCGCTGCCTGCCGTCTACGAGCGGCTGCGCACCAGCAACCAGCCGCACGACCTGGGCGGTGGCTGGGCGAT
CCCGGTCATGGTGAAGACCCACTGGAGCGACGACTACCTGACGCGTGCCCGCATCGCGCGCAACTTCATCGGCGCGCTGG
GCGTCGAGGAGGCGATGTATCCCACCGCCGAGGTGGACGCGCGCGGCGCGCCGCTCGATGGATCCCGGCGCTACGAGCTG
CGGTTTGCGCCGGGCAAGGGACTGAAGGTGGGCGCCTTCTGGTCGCTCACGATGTACCGCCGCAGCGACTGTCTTTTCGT
GGCCAACCCCATCCACCGGTATTCGATCGGCGATCGCACGCCCGGCTTGCACCACGACGCCGATGGCAGCCTGGCCCTGC
GGCTGCAGGCCGACGACCCGGGGCCGGGCGTCAACTGGCTTCCGGCGCCGAAGGGCGAGCTGTTCTACGTCGTGCTGCGG
CTGTATCAACCGCATGCCGACCATCTGGAACTGCGATTCGACTACCCGCCGATCCAGCCGATCTGA

Upstream 100 bases:

>100_bases
ACACCGATCGCCTCCTGGCCGAGCTCGGGCTTGCGGCGAACGAGATCGACGAACTTCGCCGCGCTGGCGCGGTGGCATGA
CCCAGGAAAAGAAGAGCCCC

Downstream 100 bases:

>100_bases
CACCCACAAAATCAACGGAAACACGCACGCATGACCACAATGAACCGCCGACACCTTCTCGCCACCGCTGCAGCCGGTCT
GGCACTTCCCTGGAGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHTHRRLGPEDKEVVSPNNDTVY
SNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVGRRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLI
GRHLVEDDGEDAARVRETQAQMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE
LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMYPTAEVDARGAPLDGSRRYEL
RFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRTPGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLR
LYQPHADHLELRFDYPPIQPI

Sequences:

>Translated_421_residues
MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHTHRRLGPEDKEVVSPNNDTVY
SNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVGRRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLI
GRHLVEDDGEDAARVRETQAQMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE
LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMYPTAEVDARGAPLDGSRRYEL
RFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRTPGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLR
LYQPHADHLELRFDYPPIQPI
>Mature_421_residues
MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHTHRRLGPEDKEVVSPNNDTVY
SNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVGRRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLI
GRHLVEDDGEDAARVRETQAQMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE
LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMYPTAEVDARGAPLDGSRRYEL
RFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRTPGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLR
LYQPHADHLELRFDYPPIQPI

Specific function: Unknown

COG id: COG5361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46807; Mature: 46807

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHT
CCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
HRRLGPEDKEVVSPNNDTVYSNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVG
HHHCCCCCCCEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEEHHHCCCCHHHEE
RRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLIGRHLVEDDGEDAARVRETQA
CCCCCCCCCEEEEECCCCCCEEEECHHHHHCCCCCCEEEEEHHHHCCCCCHHHHHHHHHH
QMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE
HEEEEEECCCCCEEEEEECCCCCCCCCCHHHEEEEEHHHHHHCCCCCCCCCCCCCCCHHH
LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMY
HHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHC
PTAEVDARGAPLDGSRRYELRFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRT
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCCEEEEECCCEECCCCCCC
PGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLRLYQPHADHLELRFDYPPIQP
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCCC
I
C
>Mature Secondary Structure
MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHT
CCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
HRRLGPEDKEVVSPNNDTVYSNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVG
HHHCCCCCCCEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEEHHHCCCCHHHEE
RRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLIGRHLVEDDGEDAARVRETQA
CCCCCCCCCEEEEECCCCCCEEEECHHHHHCCCCCCEEEEEHHHHCCCCCHHHHHHHHHH
QMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE
HEEEEEECCCCCEEEEEECCCCCCCCCCHHHEEEEEHHHHHHCCCCCCCCCCCCCCCHHH
LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMY
HHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHC
PTAEVDARGAPLDGSRRYELRFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRT
CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCCEEEEECCCEECCCCCCC
PGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLRLYQPHADHLELRFDYPPIQP
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA