| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611545
Identifier: 121611545
GI number: 121611545
Start: 5129664
End: 5130929
Strand: Direct
Name: 121611545
Synonym: Veis_4637
Alternate gene names: NA
Gene position: 5129664-5130929 (Clockwise)
Preceding gene: 121611544
Following gene: 121611546
Centisome position: 92.15
GC content: 68.56
Gene sequence:
>1266_bases ATGAATTCGAAGATCGTTCCCCTCGCGCACGGTTGCGACGCCGTCGTGATCCAGACGCTACCGCTGTTCGAGATGATGCG GATGCGCGCAGCGACCACCGCGCGCCGACACCCCGTGCTCGGGTTCGCTGCGCCGGATGCAGCGTCGGCCATGCGGTGGG TCAACCAGTTCACCCACACGCACCGTCGCCTCGGCCCGGAAGACAAAGAGGTCGTCAGCCCCAACAACGACACGGTCTAC AGCAATGCCTGGCTCGACCTGTCCGAAAGGCCGGTCGTCATCGAATCGCCCGAGATGGGCGACCGCTACTGGACCCTCGG CCTGCTGGACGCGTGGACGAATCCCTTCGCCTACGTCGGGCGCCGCACGACGGGTAACAGGCCCCAACGCACGCTGGTGC ATGGCCCCGCGTGGCGTGGCGTCGTCCCTGTGGACATCACGCAGACGATTGCCGCACCGGGCGATGACGTGTGGCTGATC GGGCGCCATCTCGTGGAGGACGACGGCGAAGACGCGGCGCGCGTGCGCGAGACACAAGCCCAGATGCGGCTCGTGCGCCT GGATGGCAGCGACGCGGCGATGCGGGTGGACACGTGGATGGACGGGCGCGATGCTGGCACGCCGGCTGCCGACCTGTACC TGTCGATCACGAGCGCTGCGCTGCGGCGCAATCCGCCGATGGCAGGGGAGTGCCAGGCGTGGCCTCCTGCCGCGGCCGAG CTTGAGGCGTCGCTGCCTGCCGTCTACGAGCGGCTGCGCACCAGCAACCAGCCGCACGACCTGGGCGGTGGCTGGGCGAT CCCGGTCATGGTGAAGACCCACTGGAGCGACGACTACCTGACGCGTGCCCGCATCGCGCGCAACTTCATCGGCGCGCTGG GCGTCGAGGAGGCGATGTATCCCACCGCCGAGGTGGACGCGCGCGGCGCGCCGCTCGATGGATCCCGGCGCTACGAGCTG CGGTTTGCGCCGGGCAAGGGACTGAAGGTGGGCGCCTTCTGGTCGCTCACGATGTACCGCCGCAGCGACTGTCTTTTCGT GGCCAACCCCATCCACCGGTATTCGATCGGCGATCGCACGCCCGGCTTGCACCACGACGCCGATGGCAGCCTGGCCCTGC GGCTGCAGGCCGACGACCCGGGGCCGGGCGTCAACTGGCTTCCGGCGCCGAAGGGCGAGCTGTTCTACGTCGTGCTGCGG CTGTATCAACCGCATGCCGACCATCTGGAACTGCGATTCGACTACCCGCCGATCCAGCCGATCTGA
Upstream 100 bases:
>100_bases ACACCGATCGCCTCCTGGCCGAGCTCGGGCTTGCGGCGAACGAGATCGACGAACTTCGCCGCGCTGGCGCGGTGGCATGA CCCAGGAAAAGAAGAGCCCC
Downstream 100 bases:
>100_bases CACCCACAAAATCAACGGAAACACGCACGCATGACCACAATGAACCGCCGACACCTTCTCGCCACCGCTGCAGCCGGTCT GGCACTTCCCTGGAGCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHTHRRLGPEDKEVVSPNNDTVY SNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVGRRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLI GRHLVEDDGEDAARVRETQAQMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMYPTAEVDARGAPLDGSRRYEL RFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRTPGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLR LYQPHADHLELRFDYPPIQPI
Sequences:
>Translated_421_residues MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHTHRRLGPEDKEVVSPNNDTVY SNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVGRRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLI GRHLVEDDGEDAARVRETQAQMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMYPTAEVDARGAPLDGSRRYEL RFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRTPGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLR LYQPHADHLELRFDYPPIQPI >Mature_421_residues MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHTHRRLGPEDKEVVSPNNDTVY SNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVGRRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLI GRHLVEDDGEDAARVRETQAQMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMYPTAEVDARGAPLDGSRRYEL RFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRTPGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLR LYQPHADHLELRFDYPPIQPI
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46807; Mature: 46807
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHT CCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH HRRLGPEDKEVVSPNNDTVYSNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVG HHHCCCCCCCEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEEHHHCCCCHHHEE RRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLIGRHLVEDDGEDAARVRETQA CCCCCCCCCEEEEECCCCCCEEEECHHHHHCCCCCCEEEEEHHHHCCCCCHHHHHHHHHH QMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE HEEEEEECCCCCEEEEEECCCCCCCCCCHHHEEEEEHHHHHHCCCCCCCCCCCCCCCHHH LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMY HHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHC PTAEVDARGAPLDGSRRYELRFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRT CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCCEEEEECCCEECCCCCCC PGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLRLYQPHADHLELRFDYPPIQP CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCCC I C >Mature Secondary Structure MNSKIVPLAHGCDAVVIQTLPLFEMMRMRAATTARRHPVLGFAAPDAASAMRWVNQFTHT CCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH HRRLGPEDKEVVSPNNDTVYSNAWLDLSERPVVIESPEMGDRYWTLGLLDAWTNPFAYVG HHHCCCCCCCEECCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEEEHHHCCCCHHHEE RRTTGNRPQRTLVHGPAWRGVVPVDITQTIAAPGDDVWLIGRHLVEDDGEDAARVRETQA CCCCCCCCCEEEEECCCCCCEEEECHHHHHCCCCCCEEEEEHHHHCCCCCHHHHHHHHHH QMRLVRLDGSDAAMRVDTWMDGRDAGTPAADLYLSITSAALRRNPPMAGECQAWPPAAAE HEEEEEECCCCCEEEEEECCCCCCCCCCHHHEEEEEHHHHHHCCCCCCCCCCCCCCCHHH LEASLPAVYERLRTSNQPHDLGGGWAIPVMVKTHWSDDYLTRARIARNFIGALGVEEAMY HHHCCHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHC PTAEVDARGAPLDGSRRYELRFAPGKGLKVGAFWSLTMYRRSDCLFVANPIHRYSIGDRT CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEEECCCEEEEECCCEECCCCCCC PGLHHDADGSLALRLQADDPGPGVNWLPAPKGELFYVVLRLYQPHADHLELRFDYPPIQP CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA