| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is iaaA [H]
Identifier: 121611498
GI number: 121611498
Start: 5081936
End: 5082898
Strand: Direct
Name: iaaA [H]
Synonym: Veis_4589
Alternate gene names: 121611498
Gene position: 5081936-5082898 (Clockwise)
Preceding gene: 121611497
Following gene: 121611499
Centisome position: 91.29
GC content: 72.38
Gene sequence:
>963_bases ATGAAGAACGCCACGCCCGTCATCGCCATCCACGGCGGCGCCGGCACCATCAGCACCTCGACGACCAGCCCCGAGCAGGC GCAGGCGTATCACGATGCGCTGCAGACGGTCGTGCGCGCCGCGCAGGCCGCGCTGCTCGAGGGCTTGTCGGCGCTCGACG CCACCTGCCTCGCGGTCGAGATGCTCGAAGACTGCCCGCTCTTCAATGCCGGCTACGGCGCGGTGTTCACGCACGAAGAA ACGCACGAGCTCGACGCGGCCGTGATGGACGGCGCCACGCTCGCGGCCGGCGCCATTGCCGGCGTGAGCCACGTGCGCCA CCCGGTGCGCGCCGCGCGCGCCGTGCTCGAAGACGGCGCCCACGTGCTGCTGGCCGGCGCGGGCGCCGAGGCCTTCGCGC GCGACCGCGGCCTGGAGATGGTCGAGCCCTTTTTCTTCTCGACCGACGCACGCCGCCAGCAGTTGTACCGCGTGCGCGAC ACGGGCCGCGTGGTCACCGACCACGAAGGCGCCGCCATGACCAAGCCGCCGCTGGACGAAGACAAGAAGTTCGGCACCGT CGGCGCCGTGGCGCTCGACATGCATGGCCACCTGGCCGCCGCCACCTCGACCGGCGGCATGACCAACAAGCGCGTCGGCC GCGTCGGCGATTCACCGCTCATCGGCTCCGGCACCTACGCCGACGACCGCAGCGCCGCCATCTCGTGCACCGGCAGCGGC GAAATGTTCATCCGCGTCGCGGCTGCGCACGACATCTGCGCGCGCATGGCCTACGGCGGCGCCACGCTCGAAGCGGCCAC GCACGCCGTGGTGCACGGCTCGCTGCCCGCCATCGGCGGCCCCGGCGGGCTGATCGCCGTCGACCGCCACGGCAACCTGA GCCTGGCCTTCAACACCGAAGGCATGTACCGCGGCCACGCGCGCGGCGACGCAGCGCCGGTGACGGCCATCTTCGCAGCA TGA
Upstream 100 bases:
>100_bases GGCTGGGCCAGGGCCATGCGCGCGGCCAGGTCTCCATGCCTGCCCTCCTTCCCGTTGCCGTCGCTTCCGACGCCGGCAAG AAAAAGAAGAAAGCTTCCCG
Downstream 100 bases:
>100_bases AGCACACCCCCAGTCTTCGCGCACTTCGTGTCGCTTCGCCACCCCCCTCGCCGGGGGCAGCACCAGCGGCCCGGCAAAGC CGGTTCTGCGGTGTTCCGCG
Product: peptidase T2, asparaginase 2
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MKNATPVIAIHGGAGTISTSTTSPEQAQAYHDALQTVVRAAQAALLEGLSALDATCLAVEMLEDCPLFNAGYGAVFTHEE THELDAAVMDGATLAAGAIAGVSHVRHPVRAARAVLEDGAHVLLAGAGAEAFARDRGLEMVEPFFFSTDARRQQLYRVRD TGRVVTDHEGAAMTKPPLDEDKKFGTVGAVALDMHGHLAAATSTGGMTNKRVGRVGDSPLIGSGTYADDRSAAISCTGSG EMFIRVAAAHDICARMAYGGATLEAATHAVVHGSLPAIGGPGGLIAVDRHGNLSLAFNTEGMYRGHARGDAAPVTAIFAA
Sequences:
>Translated_320_residues MKNATPVIAIHGGAGTISTSTTSPEQAQAYHDALQTVVRAAQAALLEGLSALDATCLAVEMLEDCPLFNAGYGAVFTHEE THELDAAVMDGATLAAGAIAGVSHVRHPVRAARAVLEDGAHVLLAGAGAEAFARDRGLEMVEPFFFSTDARRQQLYRVRD TGRVVTDHEGAAMTKPPLDEDKKFGTVGAVALDMHGHLAAATSTGGMTNKRVGRVGDSPLIGSGTYADDRSAAISCTGSG EMFIRVAAAHDICARMAYGGATLEAATHAVVHGSLPAIGGPGGLIAVDRHGNLSLAFNTEGMYRGHARGDAAPVTAIFAA >Mature_320_residues MKNATPVIAIHGGAGTISTSTTSPEQAQAYHDALQTVVRAAQAALLEGLSALDATCLAVEMLEDCPLFNAGYGAVFTHEE THELDAAVMDGATLAAGAIAGVSHVRHPVRAARAVLEDGAHVLLAGAGAEAFARDRGLEMVEPFFFSTDARRQQLYRVRD TGRVVTDHEGAAMTKPPLDEDKKFGTVGAVALDMHGHLAAATSTGGMTNKRVGRVGDSPLIGSGTYADDRSAAISCTGSG EMFIRVAAAHDICARMAYGGATLEAATHAVVHGSLPAIGGPGGLIAVDRHGNLSLAFNTEGMYRGHARGDAAPVTAIFAA
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=303, Percent_Identity=38.2838283828383, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI145275200, Length=303, Percent_Identity=38.2838283828383, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI98991769, Length=267, Percent_Identity=31.4606741573034, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI285002251, Length=256, Percent_Identity=32.03125, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1787050, Length=312, Percent_Identity=58.974358974359, Blast_Score=350, Evalue=7e-98, Organism=Caenorhabditis elegans, GI32564649, Length=264, Percent_Identity=26.1363636363636, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI18921183, Length=315, Percent_Identity=35.8730158730159, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI21357893, Length=268, Percent_Identity=33.2089552238806, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24652135, Length=277, Percent_Identity=31.7689530685921, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI221330102, Length=277, Percent_Identity=31.7689530685921, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24657358, Length=251, Percent_Identity=29.8804780876494, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 32880; Mature: 32880
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNATPVIAIHGGAGTISTSTTSPEQAQAYHDALQTVVRAAQAALLEGLSALDATCLAVE CCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLEDCPLFNAGYGAVFTHEETHELDAAVMDGATLAAGAIAGVSHVRHPVRAARAVLEDGA HHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC HVLLAGAGAEAFARDRGLEMVEPFFFSTDARRQQLYRVRDTGRVVTDHEGAAMTKPPLDE EEEEEECCCHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC DKKFGTVGAVALDMHGHLAAATSTGGMTNKRVGRVGDSPLIGSGTYADDRSAAISCTGSG CCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCC EMFIRVAAAHDICARMAYGGATLEAATHAVVHGSLPAIGGPGGLIAVDRHGNLSLAFNTE CEEEEEEHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCCCCCCEEEEECCCCEEEEECCC GMYRGHARGDAAPVTAIFAA CCEECCCCCCCCCEEEEEEC >Mature Secondary Structure MKNATPVIAIHGGAGTISTSTTSPEQAQAYHDALQTVVRAAQAALLEGLSALDATCLAVE CCCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLEDCPLFNAGYGAVFTHEETHELDAAVMDGATLAAGAIAGVSHVRHPVRAARAVLEDGA HHHHCCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC HVLLAGAGAEAFARDRGLEMVEPFFFSTDARRQQLYRVRDTGRVVTDHEGAAMTKPPLDE EEEEEECCCHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCC DKKFGTVGAVALDMHGHLAAATSTGGMTNKRVGRVGDSPLIGSGTYADDRSAAISCTGSG CCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCC EMFIRVAAAHDICARMAYGGATLEAATHAVVHGSLPAIGGPGGLIAVDRHGNLSLAFNTE CEEEEEEHHHHHHHHHHCCCCHHHHHHHEEEECCCCCCCCCCCEEEEECCCCEEEEECCC GMYRGHARGDAAPVTAIFAA CCEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]