| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611463
Identifier: 121611463
GI number: 121611463
Start: 5041187
End: 5041918
Strand: Direct
Name: 121611463
Synonym: Veis_4554
Alternate gene names: NA
Gene position: 5041187-5041918 (Clockwise)
Preceding gene: 121611462
Following gene: 121611464
Centisome position: 90.56
GC content: 69.26
Gene sequence:
>732_bases ATGACCGCTCCTACCCTCCCGCCGATCGTTGCCCCGATCACCGAAGACGATATCGCCCAGTTTCTGCTCCGCACGCCGGG CTTCTTCGAGCGCCATGCCCAGGTGCTGGCCAGCGTGCAGATCGCCAACCCGCATGGCGCGCGCGCCGTGAGCCTGCAAG AGCGCCAGGCCGAGATGCTGCGCGAGAAGATCAAGGGCCTGGAGCAGCGCATCATGGAGATGGTGCGCAACAGCACCGAC AACGCGACCATCGCGCACAAGTTGCACCAGTGGAGCGCGGCGCTGCTGCAGATCGAGGACCGGGGCGGGCTGCCGCAGGC CGTCGTCGATGGTCTGCGCACCCTGTTCGACATACCACAGGCCGCGCTGCGCCTGTGGGGCCTGGAAGGATTGGAGGGCC TGGATGGCATGGGGGAACCCGGCATCGATGCCCGCTTCAGCCAGGGCGCCAGCGACGACGCCCGCGCATTGGCCTCATCG CTCACGATGCCGTTTTGCGGCCCCAACCTGGGCTTCGAGCCCGCGCTCTGGCTGGCGCAGCAGGCGGGCGATCCGGCCGC GTCGCTGGCCCTGTTGCCGCTGCGCGAAGGCGCGGTCGACAGCGCCAGCCCCGCTTTTGGCCTGCTGGTGCTGGGCTCGC CAGACCCGCAGCGCTTCGACGCCGCCATGGGCACCGACTTCCTCGCGCGCATTGCAGAGTTGGCCAGTGCAGCGCTGCTG CGTCTGCGCTGA
Upstream 100 bases:
>100_bases TGGTCAGCGTTGCCTGGAGTGGCGCCGCCACCGACTCCGTTGTCATGACCGGCCCTGCCACCACGGTGTTTGAAGGCCAG ATCGAACTTCCCTCCTGCCC
Downstream 100 bases:
>100_bases CCGCGCACCAGTCGCCCGGCACAGCCCTGCGGCACCCAGACCATGGCCGACGCACCCGCATCACCGCCATCACCACCACC GTCGGCGCCACCTGCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTAPTLPPIVAPITEDDIAQFLLRTPGFFERHAQVLASVQIANPHGARAVSLQERQAEMLREKIKGLEQRIMEMVRNSTD NATIAHKLHQWSAALLQIEDRGGLPQAVVDGLRTLFDIPQAALRLWGLEGLEGLDGMGEPGIDARFSQGASDDARALASS LTMPFCGPNLGFEPALWLAQQAGDPAASLALLPLREGAVDSASPAFGLLVLGSPDPQRFDAAMGTDFLARIAELASAALL RLR
Sequences:
>Translated_243_residues MTAPTLPPIVAPITEDDIAQFLLRTPGFFERHAQVLASVQIANPHGARAVSLQERQAEMLREKIKGLEQRIMEMVRNSTD NATIAHKLHQWSAALLQIEDRGGLPQAVVDGLRTLFDIPQAALRLWGLEGLEGLDGMGEPGIDARFSQGASDDARALASS LTMPFCGPNLGFEPALWLAQQAGDPAASLALLPLREGAVDSASPAFGLLVLGSPDPQRFDAAMGTDFLARIAELASAALL RLR >Mature_242_residues TAPTLPPIVAPITEDDIAQFLLRTPGFFERHAQVLASVQIANPHGARAVSLQERQAEMLREKIKGLEQRIMEMVRNSTDN ATIAHKLHQWSAALLQIEDRGGLPQAVVDGLRTLFDIPQAALRLWGLEGLEGLDGMGEPGIDARFSQGASDDARALASSL TMPFCGPNLGFEPALWLAQQAGDPAASLALLPLREGAVDSASPAFGLLVLGSPDPQRFDAAMGTDFLARIAELASAALLR LR
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26004; Mature: 25873
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTLPPIVAPITEDDIAQFLLRTPGFFERHAQVLASVQIANPHGARAVSLQERQAEML CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH REKIKGLEQRIMEMVRNSTDNATIAHKLHQWSAALLQIEDRGGLPQAVVDGLRTLFDIPQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHH AALRLWGLEGLEGLDGMGEPGIDARFSQGASDDARALASSLTMPFCGPNLGFEPALWLAQ HHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH QAGDPAASLALLPLREGAVDSASPAFGLLVLGSPDPQRFDAAMGTDFLARIAELASAALL HCCCHHHHEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLR HCC >Mature Secondary Structure TAPTLPPIVAPITEDDIAQFLLRTPGFFERHAQVLASVQIANPHGARAVSLQERQAEML CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHH REKIKGLEQRIMEMVRNSTDNATIAHKLHQWSAALLQIEDRGGLPQAVVDGLRTLFDIPQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHH AALRLWGLEGLEGLDGMGEPGIDARFSQGASDDARALASSLTMPFCGPNLGFEPALWLAQ HHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH QAGDPAASLALLPLREGAVDSASPAFGLLVLGSPDPQRFDAAMGTDFLARIAELASAALL HCCCHHHHEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLR HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA