| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611355
Identifier: 121611355
GI number: 121611355
Start: 4904682
End: 4905839
Strand: Direct
Name: 121611355
Synonym: Veis_4441
Alternate gene names: NA
Gene position: 4904682-4905839 (Clockwise)
Preceding gene: 121611354
Following gene: 121611357
Centisome position: 88.11
GC content: 67.96
Gene sequence:
>1158_bases ATGCACGGACTTCCCCGCCGATCGCCCCGGCGCCCGGGCATCGGCCTCGCGCTGGCCGCCGGCCTCGCGCTGGCGGCGCC GGCGCACAGCGCCAGCGCAGACCCCGGCTACCCCAACCGGCCGGTGCATCTGGTGGTGGCCTTCACCGCAGGCGGCACCA CCGACACCTTGGCACGCAGCGTGAGCCAGCAACTGAGCCAGCGCCTGAAGCAGTCGTTCGTGGTGGAAAGCCGCCCCGGC GCGGGCGGCAACATCGGCACCGAATACGTGGTGCGGGCGCCGGCCGATGGCTACACGCTGCTGGTCGGCTCGGTGGGCCC GATCGCGATCAACCAGACGCTCTACAAAAGGCTGGGCCATGATCCGCTGACCGACCTGGTGCCCGTGGTGCAGATTGCCG ACGTGCCGAACGTGCTGGTGCTGCATCCGTCGCTGCCGGCCAGCACGCTAGTGTCGCGTCACCGATCATCTGTCGGTCCG CGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACGCTTGGTATTGGCTGCGCGATGCGCCTTGCGCTG CGCTCCGATGGCTGCGCGCAGCCTACGACATCTGACCGGTGACGCGACACTAGGGGATTTCGTCGCTTACCTGAAGGCCA ATCCGGGCCGACTGAACTACGGTTCCACGGGCGTGGGCACCTCGTCGCACCTGTCGGGCTTCATGCTGACCGAGCGCATC GACACGCCGGCCACGCATGTGCCGTACAAGGGCGCGGACGCGCTCAATGACCTGCTCGCGGGGCGCATACAGTTCATGTT CGCGACGATACCGTCGGTCATCGCGCATATCCGGGCGGGCAAACTCAATGCGCTGGCGGTCACCAGCGCCAGGCGCTCGC GTTCGCTGCCCGATCTGCCGACCGTGGCGGAGAAGGGCTTTCCCGGCTTCGAGGCCGGCTCATGGTTTGGCCTGTTCGCG CCCAAAGACACGCCGCAATCCGTCATCGCCACGCTGAACCAGGCGGTCAACGAGACGCTGCCGGCGCTGCAAGCACAGAT GATCCGCGAAGGCGCCGACCCGGTGGGCGGCTCGCCCGAGCAGTTCGGGCAGTTCACGCACAAGGAATATGCCAAGTGGA AGGCCGTGGTGCGGGCCACCGGCGCTGCCATCGAGTGA
Upstream 100 bases:
>100_bases GGCTACCGCGACTGAAGGCGCGCCGGCCTGTGTCCGCAGGGAGCAGAAAGTCCAGCGCAGCACCGCAACACCGCAGCACG CAGCACGCAGGAGAGACGCC
Downstream 100 bases:
>100_bases TTCCATTTCCCAATCGTTCGTGAACGCGCAGGCGCAGCGCAGGCAGCACAGATGCACGGCGAGCGGTGCCGACGAAGTGC ACGGATGGTTCAGCAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MHGLPRRSPRRPGIGLALAAGLALAAPAHSASADPGYPNRPVHLVVAFTAGGTTDTLARSVSQQLSQRLKQSFVVESRPG AGGNIGTEYVVRAPADGYTLLVGSVGPIAINQTLYKRLGHDPLTDLVPVVQIADVPNVLVLHPSLPASTLVSRHRSSVGP RWPSKRIAALHRLPIRLVLAARCALRCAPMAARSLRHLTGDATLGDFVAYLKANPGRLNYGSTGVGTSSHLSGFMLTERI DTPATHVPYKGADALNDLLAGRIQFMFATIPSVIAHIRAGKLNALAVTSARRSRSLPDLPTVAEKGFPGFEAGSWFGLFA PKDTPQSVIATLNQAVNETLPALQAQMIREGADPVGGSPEQFGQFTHKEYAKWKAVVRATGAAIE
Sequences:
>Translated_385_residues MHGLPRRSPRRPGIGLALAAGLALAAPAHSASADPGYPNRPVHLVVAFTAGGTTDTLARSVSQQLSQRLKQSFVVESRPG AGGNIGTEYVVRAPADGYTLLVGSVGPIAINQTLYKRLGHDPLTDLVPVVQIADVPNVLVLHPSLPASTLVSRHRSSVGP RWPSKRIAALHRLPIRLVLAARCALRCAPMAARSLRHLTGDATLGDFVAYLKANPGRLNYGSTGVGTSSHLSGFMLTERI DTPATHVPYKGADALNDLLAGRIQFMFATIPSVIAHIRAGKLNALAVTSARRSRSLPDLPTVAEKGFPGFEAGSWFGLFA PKDTPQSVIATLNQAVNETLPALQAQMIREGADPVGGSPEQFGQFTHKEYAKWKAVVRATGAAIE >Mature_385_residues MHGLPRRSPRRPGIGLALAAGLALAAPAHSASADPGYPNRPVHLVVAFTAGGTTDTLARSVSQQLSQRLKQSFVVESRPG AGGNIGTEYVVRAPADGYTLLVGSVGPIAINQTLYKRLGHDPLTDLVPVVQIADVPNVLVLHPSLPASTLVSRHRSSVGP RWPSKRIAALHRLPIRLVLAARCALRCAPMAARSLRHLTGDATLGDFVAYLKANPGRLNYGSTGVGTSSHLSGFMLTERI DTPATHVPYKGADALNDLLAGRIQFMFATIPSVIAHIRAGKLNALAVTSARRSRSLPDLPTVAEKGFPGFEAGSWFGLFA PKDTPQSVIATLNQAVNETLPALQAQMIREGADPVGGSPEQFGQFTHKEYAKWKAVVRATGAAIE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 40710; Mature: 40710
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGLPRRSPRRPGIGLALAAGLALAAPAHSASADPGYPNRPVHLVVAFTAGGTTDTLARS CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHH VSQQLSQRLKQSFVVESRPGAGGNIGTEYVVRAPADGYTLLVGSVGPIAINQTLYKRLGH HHHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCC DPLTDLVPVVQIADVPNVLVLHPSLPASTLVSRHRSSVGPRWPSKRIAALHRLPIRLVLA CCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ARCALRCAPMAARSLRHLTGDATLGDFVAYLKANPGRLNYGSTGVGTSSHLSGFMLTERI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC DTPATHVPYKGADALNDLLAGRIQFMFATIPSVIAHIRAGKLNALAVTSARRSRSLPDLP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCC TVAEKGFPGFEAGSWFGLFAPKDTPQSVIATLNQAVNETLPALQAQMIREGADPVGGSPE HHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QFGQFTHKEYAKWKAVVRATGAAIE HHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHGLPRRSPRRPGIGLALAAGLALAAPAHSASADPGYPNRPVHLVVAFTAGGTTDTLARS CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHH VSQQLSQRLKQSFVVESRPGAGGNIGTEYVVRAPADGYTLLVGSVGPIAINQTLYKRLGH HHHHHHHHHHHHHEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHCCC DPLTDLVPVVQIADVPNVLVLHPSLPASTLVSRHRSSVGPRWPSKRIAALHRLPIRLVLA CCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH ARCALRCAPMAARSLRHLTGDATLGDFVAYLKANPGRLNYGSTGVGTSSHLSGFMLTERI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC DTPATHVPYKGADALNDLLAGRIQFMFATIPSVIAHIRAGKLNALAVTSARRSRSLPDLP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCC TVAEKGFPGFEAGSWFGLFAPKDTPQSVIATLNQAVNETLPALQAQMIREGADPVGGSPE HHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QFGQFTHKEYAKWKAVVRATGAAIE HHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]