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The map label for this gene is med [H]

Identifier: 121611339

GI number: 121611339

Start: 4874827

End: 4875915

Strand: Direct

Name: med [H]

Synonym: Veis_4425

Alternate gene names: 121611339

Gene position: 4874827-4875915 (Clockwise)

Preceding gene: 121611338

Following gene: 121611340

Centisome position: 87.57

GC content: 65.38

Gene sequence:

>1089_bases
ATGCTTATTGCATACTCCTGCGCGGCGGACCTTCCCGGAACCGTTTTTTTCCCCCTCCATCGACGACGCCACACCACCAT
GACCACTCGCCGCCTCTTGAGCGCCAGCCTGCTGTGCACTGCGCTGGCCTTGTCGATCGCCGCCGGGCCGGCCACGGCGC
AGCCCAAGCTGCGGGTGGCGGCGATCTACACGGTGCCTTTCGAGCAGCAGTGGGCCAGCCGCATCCACAAGGCGCTGAAA
GCGGCGCAGGCGCGCGGCGAGATCGACTACCGGGCCAGCGAGAATGTCGCCAACGCCGATTACGAGCGCGTGCTGCGCGA
GTACGCCACCGGCGGCAACCAGCTCATCGTCGGCGAGGTCTTTGCGGTGGAGGCTGCGGCGCGCAGGGTGGCCAGGGATT
TCCCCAAAACGGCGTTTCTGTTCGGCTCCTCGGGCAAGCCGCAGGCGCCCAACTTCAGCGTGTTCGACAACTACATCCAG
GAGCCGGCCTATCTGTCGGGCATGGTCGCCGGGGGCATGACCCGATCGAACAAGATCGGCATGGTGGGCGGCTTTCCGAT
CCCCGAGGTGAACCGCCTGATGCAGGCTTTCATGGCCGGCGCCCGCGAGACCAACCCCAAGGTCGAGTTCACCGTGACTT
TCATCAACAGTTGGTTTGACCCGCCCAAGGCCAAGGAGGCCAGCCTGGCGCTGATCGACAAGGGCGCCGACATACTCTAT
GCCGAGCGCTTCGGCGTGAGCGACGCCGCCCGGGAAAAAGGCAAACTGGCCATCGGCAATGTGCTCGACACGCAGCCGCA
ATACCCCGACACCGTGGTGACCTCGGCCCTGTGGCATATGGAGCCGAGCATCGACCGGGCCTTGAAACTGCTGCGCGAAG
GCCGCTTCAGCGCCGAGGACTACGGCCCGTATTCGATGATGCGGCACAAAGGCTCGGAGCTTGCCCCGCTGGGCACTTTC
GCGAACAAGGTGCCCGCCGACCTGAGCGCCAAGGTCCGGGCCAGGCAGGCGGATATCCTGGCCGGCCGGTTTACCGTGAA
GATCGACGACAGCCAACCCCAATCCACGGCCGCGACAGCCGCCAAATAA

Upstream 100 bases:

>100_bases
GGCGCGCCGGCCGGGCGCCGAAGCGGCTCCGCCCAGGGCGGCAGCGGGTCGGCAGCAGGACACCGCAGGACGACCGCAGG
ACAGCAGCAGGCTGGCGCGC

Downstream 100 bases:

>100_bases
AAGCAAGGAACCCGGCCATGCACCACACCGCGCACGCGCCACGCCCTGGCCTGATCCAACGCAGCATCCGCCGGCTGGGC
CTGTGGGCGCTGGCCATGCT

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLIAYSCAADLPGTVFFPLHRRRHTTMTTRRLLSASLLCTALALSIAAGPATAQPKLRVAAIYTVPFEQQWASRIHKALK
AAQARGEIDYRASENVANADYERVLREYATGGNQLIVGEVFAVEAAARRVARDFPKTAFLFGSSGKPQAPNFSVFDNYIQ
EPAYLSGMVAGGMTRSNKIGMVGGFPIPEVNRLMQAFMAGARETNPKVEFTVTFINSWFDPPKAKEASLALIDKGADILY
AERFGVSDAAREKGKLAIGNVLDTQPQYPDTVVTSALWHMEPSIDRALKLLREGRFSAEDYGPYSMMRHKGSELAPLGTF
ANKVPADLSAKVRARQADILAGRFTVKIDDSQPQSTAATAAK

Sequences:

>Translated_362_residues
MLIAYSCAADLPGTVFFPLHRRRHTTMTTRRLLSASLLCTALALSIAAGPATAQPKLRVAAIYTVPFEQQWASRIHKALK
AAQARGEIDYRASENVANADYERVLREYATGGNQLIVGEVFAVEAAARRVARDFPKTAFLFGSSGKPQAPNFSVFDNYIQ
EPAYLSGMVAGGMTRSNKIGMVGGFPIPEVNRLMQAFMAGARETNPKVEFTVTFINSWFDPPKAKEASLALIDKGADILY
AERFGVSDAAREKGKLAIGNVLDTQPQYPDTVVTSALWHMEPSIDRALKLLREGRFSAEDYGPYSMMRHKGSELAPLGTF
ANKVPADLSAKVRARQADILAGRFTVKIDDSQPQSTAATAAK
>Mature_362_residues
MLIAYSCAADLPGTVFFPLHRRRHTTMTTRRLLSASLLCTALALSIAAGPATAQPKLRVAAIYTVPFEQQWASRIHKALK
AAQARGEIDYRASENVANADYERVLREYATGGNQLIVGEVFAVEAAARRVARDFPKTAFLFGSSGKPQAPNFSVFDNYIQ
EPAYLSGMVAGGMTRSNKIGMVGGFPIPEVNRLMQAFMAGARETNPKVEFTVTFINSWFDPPKAKEASLALIDKGADILY
AERFGVSDAAREKGKLAIGNVLDTQPQYPDTVVTSALWHMEPSIDRALKLLREGRFSAEDYGPYSMMRHKGSELAPLGTF
ANKVPADLSAKVRARQADILAGRFTVKIDDSQPQSTAATAAK

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 39425; Mature: 39425

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAYSCAADLPGTVFFPLHRRRHTTMTTRRLLSASLLCTALALSIAAGPATAQPKLRVA
CEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
AIYTVPFEQQWASRIHKALKAAQARGEIDYRASENVANADYERVLREYATGGNQLIVGEV
EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHH
FAVEAAARRVARDFPKTAFLFGSSGKPQAPNFSVFDNYIQEPAYLSGMVAGGMTRSNKIG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
MVGGFPIPEVNRLMQAFMAGARETNPKVEFTVTFINSWFDPPKAKEASLALIDKGADILY
EECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEE
AERFGVSDAAREKGKLAIGNVLDTQPQYPDTVVTSALWHMEPSIDRALKLLREGRFSAED
EHHCCCCHHHHHCCCEEECCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
YGPYSMMRHKGSELAPLGTFANKVPADLSAKVRARQADILAGRFTVKIDDSQPQSTAATA
CCCHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCCCCCCCHHCC
AK
CC
>Mature Secondary Structure
MLIAYSCAADLPGTVFFPLHRRRHTTMTTRRLLSASLLCTALALSIAAGPATAQPKLRVA
CEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
AIYTVPFEQQWASRIHKALKAAQARGEIDYRASENVANADYERVLREYATGGNQLIVGEV
EEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEHH
FAVEAAARRVARDFPKTAFLFGSSGKPQAPNFSVFDNYIQEPAYLSGMVAGGMTRSNKIG
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCC
MVGGFPIPEVNRLMQAFMAGARETNPKVEFTVTFINSWFDPPKAKEASLALIDKGADILY
EECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEEE
AERFGVSDAAREKGKLAIGNVLDTQPQYPDTVVTSALWHMEPSIDRALKLLREGRFSAED
EHHCCCCHHHHHCCCEEECCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
YGPYSMMRHKGSELAPLGTFANKVPADLSAKVRARQADILAGRFTVKIDDSQPQSTAATA
CCCHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHEEEEEEEEEECCCCCCCCHHCC
AK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]