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The map label for this gene is motB [H]

Identifier: 121611336

GI number: 121611336

Start: 4872667

End: 4873650

Strand: Direct

Name: motB [H]

Synonym: Veis_4422

Alternate gene names: 121611336

Gene position: 4872667-4873650 (Clockwise)

Preceding gene: 121611335

Following gene: 121611337

Centisome position: 87.53

GC content: 69.51

Gene sequence:

>984_bases
ATGACTGCGCCGGTTGCCGTCACGGCAGAAAAGAAACTCCAGCCCATCATCGTCCGGCGCGTGCACAGGGCCGCGCCTGC
CGGGCATATGGGCACCTGGAAAATCGCCTATGCCGATTTCGTCACGGCCATGATGGCGTTCTTTCTGCTGCTGTGGCTGC
TGGGCTCGACCGCCAAGGGCGATCTGCAAGAGATTGCCGCCTACTTCGCCGCGCCGCTGGGCGCGTCGATGGTCGGCACG
GACGGCGCGGGCCGCAGTTCCAGCGTGATTCCCGCAGGGGGCGAAGACCTGACGAAGGCGCTCGGCCAGAGCCGGCGCTC
GGGCGCGCAGGCATCCGGGCAGCGGCGCATCGGCCTGGACGCCGAGTACGCGCGCCAGGACCGCCAGCGCATCGAGGCCC
TGCGGGCCAAGTTCGATGCGCTGATGGCCAGCAACCCGCGGCTGAACGAATACCGCTCGCAAATCCGCATCCGCATCACG
CCCGACGGCCTGCAGATACAGATCATCGACGAACAAAACCGCCCGATGTTCGACAGCGGCAGCGCGCGCGTGCTGCCGCA
TATGCGCGACATACTGCACGCCATCGGCGCAGCGCTCGGCGGCGTGAAAAACCGCATCAGCCTGGCCGGCCATACCGACG
CCGTGCCCTATGGCAAATACGGCCCGCACGACGAGCCGGGCTACAGCAACTGGGAACTATCGGCCGACCGCGCCAATGCC
TCGCGCCGCGAACTGGTCTCGGCCGGGATGCCGGACGACCAACTCGGCCGCGTGGTGGGCCTGGCGGCCAGCGATCCGCT
GGCGCCTGACGACCCGCTCGCGCCGGCCAACCGGCGCATCTCCATCACGGTGCTGACCCACGAGGCCGAAGAGCGGCTGA
TGGCCCGGGAACTGCCCGCGATCACGGCGACGCAACTGCTGCATGACGCCCAGGCCAGGCCGGCCCTGCACCCCGAGCCG
CCCCGCCCCGCCCCGAGCCGGTAG

Upstream 100 bases:

>100_bases
GCTACAACCCGGCCACGGCCATAGAGTTCGGCCGCAAGGTGCTTTTCAGCAGCGTGCGCCCGGGCTTTCTGGAACTGGAA
AAGCATGTGAAGGAGCGCAA

Downstream 100 bases:

>100_bases
CCGTTACGAATCGACAAGCCTTGCATGCAGCCATCTCCGACCGAAAGGCGACCCTGTGACCACTGACCTTCGTTTTCTGA
TCGTCGACGACTTTTCCACC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTAPVAVTAEKKLQPIIVRRVHRAAPAGHMGTWKIAYADFVTAMMAFFLLLWLLGSTAKGDLQEIAAYFAAPLGASMVGT
DGAGRSSSVIPAGGEDLTKALGQSRRSGAQASGQRRIGLDAEYARQDRQRIEALRAKFDALMASNPRLNEYRSQIRIRIT
PDGLQIQIIDEQNRPMFDSGSARVLPHMRDILHAIGAALGGVKNRISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANA
SRRELVSAGMPDDQLGRVVGLAASDPLAPDDPLAPANRRISITVLTHEAEERLMARELPAITATQLLHDAQARPALHPEP
PRPAPSR

Sequences:

>Translated_327_residues
MTAPVAVTAEKKLQPIIVRRVHRAAPAGHMGTWKIAYADFVTAMMAFFLLLWLLGSTAKGDLQEIAAYFAAPLGASMVGT
DGAGRSSSVIPAGGEDLTKALGQSRRSGAQASGQRRIGLDAEYARQDRQRIEALRAKFDALMASNPRLNEYRSQIRIRIT
PDGLQIQIIDEQNRPMFDSGSARVLPHMRDILHAIGAALGGVKNRISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANA
SRRELVSAGMPDDQLGRVVGLAASDPLAPDDPLAPANRRISITVLTHEAEERLMARELPAITATQLLHDAQARPALHPEP
PRPAPSR
>Mature_326_residues
TAPVAVTAEKKLQPIIVRRVHRAAPAGHMGTWKIAYADFVTAMMAFFLLLWLLGSTAKGDLQEIAAYFAAPLGASMVGTD
GAGRSSSVIPAGGEDLTKALGQSRRSGAQASGQRRIGLDAEYARQDRQRIEALRAKFDALMASNPRLNEYRSQIRIRITP
DGLQIQIIDEQNRPMFDSGSARVLPHMRDILHAIGAALGGVKNRISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANAS
RRELVSAGMPDDQLGRVVGLAASDPLAPDDPLAPANRRISITVLTHEAEERLMARELPAITATQLLHDAQARPALHPEPP
RPAPSR

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=283, Percent_Identity=46.643109540636, Blast_Score=245, Evalue=3e-66,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 35317; Mature: 35185

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPVAVTAEKKLQPIIVRRVHRAAPAGHMGTWKIAYADFVTAMMAFFLLLWLLGSTAKG
CCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCC
DLQEIAAYFAAPLGASMVGTDGAGRSSSVIPAGGEDLTKALGQSRRSGAQASGQRRIGLD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
AEYARQDRQRIEALRAKFDALMASNPRLNEYRSQIRIRITPDGLQIQIIDEQNRPMFDSG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCEEEEEEECCCCCCCCCC
SARVLPHMRDILHAIGAALGGVKNRISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANA
CCCCCHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEECCHHCCH
SRRELVSAGMPDDQLGRVVGLAASDPLAPDDPLAPANRRISITVLTHEAEERLMARELPA
HHHHHHHCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCH
ITATQLLHDAQARPALHPEPPRPAPSR
HHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAPVAVTAEKKLQPIIVRRVHRAAPAGHMGTWKIAYADFVTAMMAFFLLLWLLGSTAKG
CCCCEECHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCC
DLQEIAAYFAAPLGASMVGTDGAGRSSSVIPAGGEDLTKALGQSRRSGAQASGQRRIGLD
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
AEYARQDRQRIEALRAKFDALMASNPRLNEYRSQIRIRITPDGLQIQIIDEQNRPMFDSG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCEEEEECCCCEEEEEEECCCCCCCCCC
SARVLPHMRDILHAIGAALGGVKNRISLAGHTDAVPYGKYGPHDEPGYSNWELSADRANA
CCCCCHHHHHHHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEECCHHCCH
SRRELVSAGMPDDQLGRVVGLAASDPLAPDDPLAPANRRISITVLTHEAEERLMARELPA
HHHHHHHCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCH
ITATQLLHDAQARPALHPEPPRPAPSR
HHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9139919; 11677609; 10586519 [H]