| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611320
Identifier: 121611320
GI number: 121611320
Start: 4857192
End: 4857422
Strand: Direct
Name: 121611320
Synonym: Veis_4406
Alternate gene names: NA
Gene position: 4857192-4857422 (Clockwise)
Preceding gene: 121611313
Following gene: 121611321
Centisome position: 87.25
GC content: 53.25
Gene sequence:
>231_bases GTGTCTCCTTATATCTTTCAGATCATTCAAACTTCAGTGGTCAAGGCGTGGTTGCCAGCCTTGATTGCTGAACTGGTTGA CTCACCACCGTGCAGCCTGTGTCTCCTGCGAGCCCGAGCTCGAATCTCAGCCCAGGGCGCACGGTGGTGGTCTGTTTGTT CTGCCGCATCCCGAATGGTTGACCGAACACATTTCGTATTCATAAGGCTGGGAGCCACAGGACTTGTATGA
Upstream 100 bases:
>100_bases CCATGCACGTTCTTCAGATTGGCCTTGCTGCCGTCCCACAGATGGACATGTCCATCGATGATGAAAATGTCTTCACCGCT CTTGGTTCGATACATGGTAT
Downstream 100 bases:
>100_bases GTGAACCCGTTTATGTAGGTATCGACGTGGCCAAGCGCACCTTCGAGGTGGCCACCACTGGTCAAGCACAGACCTCGAGT CTTGGCAACGATGAGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSPYIFQIIQTSVVKAWLPALIAELVDSPPCSLCLLRARARISAQGARWWSVCSAASRMVDRTHFVFIRLGATGLV
Sequences:
>Translated_76_residues MSPYIFQIIQTSVVKAWLPALIAELVDSPPCSLCLLRARARISAQGARWWSVCSAASRMVDRTHFVFIRLGATGLV >Mature_75_residues SPYIFQIIQTSVVKAWLPALIAELVDSPPCSLCLLRARARISAQGARWWSVCSAASRMVDRTHFVFIRLGATGLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8404; Mature: 8273
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPYIFQIIQTSVVKAWLPALIAELVDSPPCSLCLLRARARISAQGARWWSVCSAASRMV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DRTHFVFIRLGATGLV HHHHEEEEEECCCCCC >Mature Secondary Structure SPYIFQIIQTSVVKAWLPALIAELVDSPPCSLCLLRARARISAQGARWWSVCSAASRMV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DRTHFVFIRLGATGLV HHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA