Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611313

Identifier: 121611313

GI number: 121611313

Start: 4847239

End: 4849422

Strand: Direct

Name: 121611313

Synonym: Veis_4399

Alternate gene names: NA

Gene position: 4847239-4849422 (Clockwise)

Preceding gene: 121611312

Following gene: 121611320

Centisome position: 87.07

GC content: 69.69

Gene sequence:

>2184_bases
GTGCAAGACAGCCACCCGGCCCCCGGCGCCACGGTCGATGGCCGGTTCCAGCACGCGCTGCAAAGCGCCGATTGGCCCTT
GCTGGCGCGCCTGTGCCAGCGGGCGTTGCGCAAAAACCCGCGTGACCTGCCGGCCACGCGGCTGCTCGGCCATGCGCTGG
AACGCCTGGGCAAGACTGCCGCGTGCGGGCAGGTCTACCGCCGCGGCGCGCTGCTGTGGCCCAACGATGCCGAGCTGCTG
ATCAACTACGCCAGCATGTTGCTCAAGCATGCGCACACTGCGCAGGCGCTGCCGGTTCTGGAGCAGGTCTGCGCGCTGCG
GCCTGACAAGGCGGTGTGCTGGCTCCAACTGTCGCAATGCTGCTATTTGCTGACGCTGCACGAAAGGGGTTTGCAAGCGG
CCGAACGAGCCGCTGCGCTGGCCACGGAGCCGGGCGAAAAATCGGCCGCGCTGACCCAGAAAGCAATCCATGGCCGCGAG
CTGGGGCAGGTCCGGCAGGCGGTGCAGGACTGTCTGCAAGCCATTGCGCTGACGCCCGGGGATCTGTCGAACCACACCAA
CCGGCTGCTGTTCATGCTGGCCGACCCGCAGGCCGACGCCGCCAGCCTGGCGCAGGCCGCGCGCGACTATGCGGCGGTCG
TCGAGCCGCCGCTGAAACCGCACTGGCCCGGCTTTGCCGAGCACCAAGGCGCGCCATGGCGCCGGCTGCGCGTCGGGTTT
TTGTCGCCTGATTTCCGCACGCACTCGGTGATGTACTTCGTCGAGGGCTTGCTGGCGCAGTTGGACCGGCGCCAGTTCGA
GGTCTTTGCCTTTTATCTGTTCCCGCGCGACGACCCGGTGACCGAACGGGTGCGGCGCCATGCCGATCGCTTCGTGCGCC
TGGCGGGGCTGGGCGCCGAGCAGCAGGCGCAGGCGATTCGGGCGCAGCGCATCGACATCCTGATCGACCTGGCCGGGCAC
ACCGGCTACAACGGCTTGCAGGCCATGGCCCACAAGGCGGCTCCGGTGCAGGTGTCGTGGCTCGGGTTTCCGGCGACGAC
CGGGCTGCAGGCCGTGGATTACAAGCTCAGCGACGAGATCACCGACCCGCCCGAGGCCCAGGCGCATTACACCGAGCAGT
TGTACCGCCTGCCGACGCTGTTTGCCTGCTACCGCCCGATGAGCCGACACCCCCTTTGGCGCTACCAGCCGCGCTACCAG
GTGCAGCCCACGCCGGCGCTGGACAAGGGCCACATCACCTTTGGCTGCTGCAACAACCTGGGCAAGCTCGGCGACGAAGT
GCTGGCGCTGTGGGGCCAGTTGCTGCAAGCGCTGCCGGACGCGCGCCTGCTGATCGAGGGCAAGAACCTCGATGGCCCGG
ACTTCGCCGGCGCCTACCGCCAGCGCTGCCAGGGCCTGGGGCTGGACCCCGAGCGGCTGGAACTGGTGGCGCAGCAGGGC
GACAACCAGTACCTGACCTACCACCGCATCGATATCGCGCTCGACCCCTTTCCGCTGGTCGGCGGCACGACCACGTTCGA
CGCGCTGTGGATGGGCCTGCCCGTGGTCTCGATGGTCGGCCAGAGCTTCAAGAGCCGCATGGGCCTGGGCCTGCTGAGCT
ATCTGGGGCGCACCGAATGGCTGGCCGCAACGCCCGCCGACTATCTGCGCATTGCCTGCGCGCTGGCCGCCGACAGGCAG
GCGCTGAACCGCCTGCGCCTGGGATTGCGCGCCGAGGTCGAGCGCTCGGTGCTGATGCGCGAGGACCTCTTCAACCACCA
TTTCGGCGAGGGCCTGCGCGCGATGTGGCTGCTGTGGCTGGCCCGGGCCAAGCACCCGGATGACGCCCAGGCCCAGGCGC
AGGCCCTGGACGATTGGCTGCCCGGCTTGCCCGACGCCTGGCGCCAGCCCCCCGCGCCGGGGGTGGGGCTGGGGCCGGGC
CAGCGCATCAGCCTGGCGCAGGCGCACCAGCGCTTGCAGGCGCTGGTGGCCAAAGCCCGGGCCAGCACGGCGGCCATGCC
CGCAGGCGCCACCATCACCGGCCGCCACTGGAAGGCGCTGACCCTGCTGGCCGAAACCGTGCTGAACGCGGTGCCGAATG
ACCCCGTGGCGCTGGCCTGCCTGGCCGAGGTGGAGCACGCCCATGGTCACAGCGAATTTGCCGTGACCTACCTGTGGCAT
GCGACGCAGGCGATGGGATCGTGA

Upstream 100 bases:

>100_bases
CAAGCTGTTGCAGTAGCCGTGCCCCGAGCCGTGCCCCGCACAGTACCCCGTACAACGCCCCGTACAACGCCCCGAACGGC
GGCCCGGCCAAGGACGCAGC

Downstream 100 bases:

>100_bases
ATCGCGGTATCGAGGGCCGCCCGGGATCGTCGGCACACAGGCCGGGCGCCCGCCCCTCGGGGATGGGGCGCGGTCATGCG
CGTCAGCGAAGCCGTCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; SPINDLY Family O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Methyltransferase Type; TPR Domain Protein; FkbM Family Methyltransferase; SPY Protein; TPR Repeat Protein; Glycosyltransferase TPR Domain Protein; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tpr Repeat-Containing Protein; Methyltransferase Regulatory Domain; Porphyrin Biosynthesis Protein; Tetratricopeptide Domain Protein; Transferase; TPR Repeat Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Glycosyl Transferase; SEC-C Motif Domain Protein; Sulfotransferase; O-Linked GLCNAC Transferase; TPR Domain/SEC-C Motif Domain Protein; Glycosyl Transferase TPR Repeat Protein; TPR Repeat; O-Linked N-Acetylglucosamine TransferaNDLY Family; Glycosyl Transferase; Tetratricopeptide Repeat Protein; O-Linked Acetylglucosamine Transferase

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MQDSHPAPGATVDGRFQHALQSADWPLLARLCQRALRKNPRDLPATRLLGHALERLGKTAACGQVYRRGALLWPNDAELL
INYASMLLKHAHTAQALPVLEQVCALRPDKAVCWLQLSQCCYLLTLHERGLQAAERAAALATEPGEKSAALTQKAIHGRE
LGQVRQAVQDCLQAIALTPGDLSNHTNRLLFMLADPQADAASLAQAARDYAAVVEPPLKPHWPGFAEHQGAPWRRLRVGF
LSPDFRTHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDDPVTERVRRHADRFVRLAGLGAEQQAQAIRAQRIDILIDLAGH
TGYNGLQAMAHKAAPVQVSWLGFPATTGLQAVDYKLSDEITDPPEAQAHYTEQLYRLPTLFACYRPMSRHPLWRYQPRYQ
VQPTPALDKGHITFGCCNNLGKLGDEVLALWGQLLQALPDARLLIEGKNLDGPDFAGAYRQRCQGLGLDPERLELVAQQG
DNQYLTYHRIDIALDPFPLVGGTTTFDALWMGLPVVSMVGQSFKSRMGLGLLSYLGRTEWLAATPADYLRIACALAADRQ
ALNRLRLGLRAEVERSVLMREDLFNHHFGEGLRAMWLLWLARAKHPDDAQAQAQALDDWLPGLPDAWRQPPAPGVGLGPG
QRISLAQAHQRLQALVAKARASTAAMPAGATITGRHWKALTLLAETVLNAVPNDPVALACLAEVEHAHGHSEFAVTYLWH
ATQAMGS

Sequences:

>Translated_727_residues
MQDSHPAPGATVDGRFQHALQSADWPLLARLCQRALRKNPRDLPATRLLGHALERLGKTAACGQVYRRGALLWPNDAELL
INYASMLLKHAHTAQALPVLEQVCALRPDKAVCWLQLSQCCYLLTLHERGLQAAERAAALATEPGEKSAALTQKAIHGRE
LGQVRQAVQDCLQAIALTPGDLSNHTNRLLFMLADPQADAASLAQAARDYAAVVEPPLKPHWPGFAEHQGAPWRRLRVGF
LSPDFRTHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDDPVTERVRRHADRFVRLAGLGAEQQAQAIRAQRIDILIDLAGH
TGYNGLQAMAHKAAPVQVSWLGFPATTGLQAVDYKLSDEITDPPEAQAHYTEQLYRLPTLFACYRPMSRHPLWRYQPRYQ
VQPTPALDKGHITFGCCNNLGKLGDEVLALWGQLLQALPDARLLIEGKNLDGPDFAGAYRQRCQGLGLDPERLELVAQQG
DNQYLTYHRIDIALDPFPLVGGTTTFDALWMGLPVVSMVGQSFKSRMGLGLLSYLGRTEWLAATPADYLRIACALAADRQ
ALNRLRLGLRAEVERSVLMREDLFNHHFGEGLRAMWLLWLARAKHPDDAQAQAQALDDWLPGLPDAWRQPPAPGVGLGPG
QRISLAQAHQRLQALVAKARASTAAMPAGATITGRHWKALTLLAETVLNAVPNDPVALACLAEVEHAHGHSEFAVTYLWH
ATQAMGS
>Mature_727_residues
MQDSHPAPGATVDGRFQHALQSADWPLLARLCQRALRKNPRDLPATRLLGHALERLGKTAACGQVYRRGALLWPNDAELL
INYASMLLKHAHTAQALPVLEQVCALRPDKAVCWLQLSQCCYLLTLHERGLQAAERAAALATEPGEKSAALTQKAIHGRE
LGQVRQAVQDCLQAIALTPGDLSNHTNRLLFMLADPQADAASLAQAARDYAAVVEPPLKPHWPGFAEHQGAPWRRLRVGF
LSPDFRTHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDDPVTERVRRHADRFVRLAGLGAEQQAQAIRAQRIDILIDLAGH
TGYNGLQAMAHKAAPVQVSWLGFPATTGLQAVDYKLSDEITDPPEAQAHYTEQLYRLPTLFACYRPMSRHPLWRYQPRYQ
VQPTPALDKGHITFGCCNNLGKLGDEVLALWGQLLQALPDARLLIEGKNLDGPDFAGAYRQRCQGLGLDPERLELVAQQG
DNQYLTYHRIDIALDPFPLVGGTTTFDALWMGLPVVSMVGQSFKSRMGLGLLSYLGRTEWLAATPADYLRIACALAADRQ
ALNRLRLGLRAEVERSVLMREDLFNHHFGEGLRAMWLLWLARAKHPDDAQAQAQALDDWLPGLPDAWRQPPAPGVGLGPG
QRISLAQAHQRLQALVAKARASTAAMPAGATITGRHWKALTLLAETVLNAVPNDPVALACLAEVEHAHGHSEFAVTYLWH
ATQAMGS

Specific function: Unknown

COG id: COG3914

COG function: function code O; Predicted O-linked N-acetylglucosamine transferase, SPINDLY family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=474, Percent_Identity=23.4177215189873, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI32307148, Length=393, Percent_Identity=23.9185750636132, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115532690, Length=360, Percent_Identity=24.4444444444444, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115532692, Length=360, Percent_Identity=24.7222222222222, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17647755, Length=352, Percent_Identity=24.7159090909091, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24585827, Length=352, Percent_Identity=24.7159090909091, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24585829, Length=352, Percent_Identity=24.7159090909091, Blast_Score=101, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80298; Mature: 80298

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSHPAPGATVDGRFQHALQSADWPLLARLCQRALRKNPRDLPATRLLGHALERLGKTA
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH
ACGQVYRRGALLWPNDAELLINYASMLLKHAHTAQALPVLEQVCALRPDKAVCWLQLSQC
HHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
CYLLTLHERGLQAAERAAALATEPGEKSAALTQKAIHGRELGQVRQAVQDCLQAIALTPG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLSNHTNRLLFMLADPQADAASLAQAARDYAAVVEPPLKPHWPGFAEHQGAPWRRLRVGF
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEEC
LSPDFRTHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDDPVTERVRRHADRFVRLAGLGAE
CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCH
QQAQAIRAQRIDILIDLAGHTGYNGLQAMAHKAAPVQVSWLGFPATTGLQAVDYKLSDEI
HHHHHHHHHHCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHCCEECCCCC
TDPPEAQAHYTEQLYRLPTLFACYRPMSRHPLWRYQPRYQVQPTPALDKGHITFGCCNNL
CCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
GKLGDEVLALWGQLLQALPDARLLIEGKNLDGPDFAGAYRQRCQGLGLDPERLELVAQQG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC
DNQYLTYHRIDIALDPFPLVGGTTTFDALWMGLPVVSMVGQSFKSRMGLGLLSYLGRTEW
CCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LAATPADYLRIACALAADRQALNRLRLGLRAEVERSVLMREDLFNHHFGEGLRAMWLLWL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARAKHPDDAQAQAQALDDWLPGLPDAWRQPPAPGVGLGPGQRISLAQAHQRLQALVAKAR
HHCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ASTAAMPAGATITGRHWKALTLLAETVLNAVPNDPVALACLAEVEHAHGHSEFAVTYLWH
HHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH
ATQAMGS
HHHHHCC
>Mature Secondary Structure
MQDSHPAPGATVDGRFQHALQSADWPLLARLCQRALRKNPRDLPATRLLGHALERLGKTA
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHH
ACGQVYRRGALLWPNDAELLINYASMLLKHAHTAQALPVLEQVCALRPDKAVCWLQLSQC
HHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
CYLLTLHERGLQAAERAAALATEPGEKSAALTQKAIHGRELGQVRQAVQDCLQAIALTPG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DLSNHTNRLLFMLADPQADAASLAQAARDYAAVVEPPLKPHWPGFAEHQGAPWRRLRVGF
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEEEEC
LSPDFRTHSVMYFVEGLLAQLDRRQFEVFAFYLFPRDDPVTERVRRHADRFVRLAGLGAE
CCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCH
QQAQAIRAQRIDILIDLAGHTGYNGLQAMAHKAAPVQVSWLGFPATTGLQAVDYKLSDEI
HHHHHHHHHHCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHCCEECCCCC
TDPPEAQAHYTEQLYRLPTLFACYRPMSRHPLWRYQPRYQVQPTPALDKGHITFGCCNNL
CCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
GKLGDEVLALWGQLLQALPDARLLIEGKNLDGPDFAGAYRQRCQGLGLDPERLELVAQQG
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC
DNQYLTYHRIDIALDPFPLVGGTTTFDALWMGLPVVSMVGQSFKSRMGLGLLSYLGRTEW
CCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LAATPADYLRIACALAADRQALNRLRLGLRAEVERSVLMREDLFNHHFGEGLRAMWLLWL
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARAKHPDDAQAQAQALDDWLPGLPDAWRQPPAPGVGLGPGQRISLAQAHQRLQALVAKAR
HHCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ASTAAMPAGATITGRHWKALTLLAETVLNAVPNDPVALACLAEVEHAHGHSEFAVTYLWH
HHHHCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH
ATQAMGS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA