| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611262
Identifier: 121611262
GI number: 121611262
Start: 4790449
End: 4790730
Strand: Direct
Name: 121611262
Synonym: Veis_4348
Alternate gene names: NA
Gene position: 4790449-4790730 (Clockwise)
Preceding gene: 121611261
Following gene: 121611270
Centisome position: 86.05
GC content: 59.57
Gene sequence:
>282_bases ATGAGCAACCAACGATTTGCCAGCGTCTGGGATGCCATCGAGGACACCCCGGAAGAAGCGGAAAACATGAAACTGCGCTC CGTCCTGCTGATGGCGCTGAAGAACCACCTCACTCGCACCGAGATGAGCCAAGCGCAAGCCGCCAAGCTCTTTGGCGTGA CTCAGCCGCGTGTCTCAGACCTGATGCGCGGCAAGATCAACCTGTTCGGCCTCGATGCACTGGTGAACATGGCGACGGCT GCCGGGCTTCACATCGAAATGCGGGTGCTCGAAGTCGCCTGA
Upstream 100 bases:
>100_bases GTGCGTCACTGTTTCAAGAAGAAGACAGAGAAAAGACCAGCAAAGTTGATCTGGACTTGGCTGCCAAGCGTTACCGTGAC TTGTTGAAGGAGCCAGGCCA
Downstream 100 bases:
>100_bases CCTTCTCGAAACTCGCCGTTCTGCTCTGCGTCGAGCGAGAACGGTTTTCGAGAACATCCAGACCGCATCGGCGCTGGGCA GCGCCACATTCTCGGCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Conserved Small Protein; Phage Associated Protein
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSNQRFASVWDAIEDTPEEAENMKLRSVLLMALKNHLTRTEMSQAQAAKLFGVTQPRVSDLMRGKINLFGLDALVNMATA AGLHIEMRVLEVA
Sequences:
>Translated_93_residues MSNQRFASVWDAIEDTPEEAENMKLRSVLLMALKNHLTRTEMSQAQAAKLFGVTQPRVSDLMRGKINLFGLDALVNMATA AGLHIEMRVLEVA >Mature_92_residues SNQRFASVWDAIEDTPEEAENMKLRSVLLMALKNHLTRTEMSQAQAAKLFGVTQPRVSDLMRGKINLFGLDALVNMATAA GLHIEMRVLEVA
Specific function: Unknown
COG id: COG5606
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10343; Mature: 10212
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQRFASVWDAIEDTPEEAENMKLRSVLLMALKNHLTRTEMSQAQAAKLFGVTQPRVSD CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LMRGKINLFGLDALVNMATAAGLHIEMRVLEVA HHHCCCCEEHHHHHHHHHHHCCCEEEEEEEECC >Mature Secondary Structure SNQRFASVWDAIEDTPEEAENMKLRSVLLMALKNHLTRTEMSQAQAAKLFGVTQPRVSD CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LMRGKINLFGLDALVNMATAAGLHIEMRVLEVA HHHCCCCEEHHHHHHHHHHHCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA