| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611261
Identifier: 121611261
GI number: 121611261
Start: 4790112
End: 4790435
Strand: Direct
Name: 121611261
Synonym: Veis_4347
Alternate gene names: NA
Gene position: 4790112-4790435 (Clockwise)
Preceding gene: 121611260
Following gene: 121611262
Centisome position: 86.05
GC content: 56.17
Gene sequence:
>324_bases ATGACCGATTCCAAGCCCGTCGAGTTTCGGGGCAACTCCCTTGATGACCTTCGCGCTTTTCCGCTTTCGGCCAGGCGCGA GGCAGGTCATCAGCTCGACCAGGTACAGAGCGGACAAGAACCGGACGACTGGAAGCCCATGAACACCGTGGGCCAAGGCG TGAAGGAAATTCGGATTCGGGATGCTGCCGGGGCGTTTCGGGTCATCTACGTTGCCAAGTTCGCTGATGCCGTCTACGTG CGTCACTGTTTCAAGAAGAAGACAGAGAAAAGACCAGCAAAGTTGATCTGGACTTGGCTGCCAAGCGTTACCGTGACTTG TTGA
Upstream 100 bases:
>100_bases TCTCAGAAAACGGAAAAATCGTACGCTCAGCCGGTGGGTTGTTCCATTGCTTCCTGATGCGACGTGCCAAAAAAAATACA AAATTTTGTATGATTGCGGC
Downstream 100 bases:
>100_bases AGGAGCCAGGCCAATGAGCAACCAACGATTTGCCAGCGTCTGGGATGCCATCGAGGACACCCCGGAAGAAGCGGAAAACA TGAAACTGCGCTCCGTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTDSKPVEFRGNSLDDLRAFPLSARREAGHQLDQVQSGQEPDDWKPMNTVGQGVKEIRIRDAAGAFRVIYVAKFADAVYV RHCFKKKTEKRPAKLIWTWLPSVTVTC
Sequences:
>Translated_107_residues MTDSKPVEFRGNSLDDLRAFPLSARREAGHQLDQVQSGQEPDDWKPMNTVGQGVKEIRIRDAAGAFRVIYVAKFADAVYV RHCFKKKTEKRPAKLIWTWLPSVTVTC >Mature_106_residues TDSKPVEFRGNSLDDLRAFPLSARREAGHQLDQVQSGQEPDDWKPMNTVGQGVKEIRIRDAAGAFRVIYVAKFADAVYVR HCFKKKTEKRPAKLIWTWLPSVTVTC
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12177; Mature: 12046
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSKPVEFRGNSLDDLRAFPLSARREAGHQLDQVQSGQEPDDWKPMNTVGQGVKEIRIR CCCCCCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH DAAGAFRVIYVAKFADAVYVRHCFKKKTEKRPAKLIWTWLPSVTVTC CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCEEECC >Mature Secondary Structure TDSKPVEFRGNSLDDLRAFPLSARREAGHQLDQVQSGQEPDDWKPMNTVGQGVKEIRIR CCCCCCEECCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH DAAGAFRVIYVAKFADAVYVRHCFKKKTEKRPAKLIWTWLPSVTVTC CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA