Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is bugT [H]

Identifier: 121611195

GI number: 121611195

Start: 4718309

End: 4719379

Strand: Direct

Name: bugT [H]

Synonym: Veis_4279

Alternate gene names: 121611195

Gene position: 4718309-4719379 (Clockwise)

Preceding gene: 121611194

Following gene: 121611196

Centisome position: 84.76

GC content: 67.79

Gene sequence:

>1071_bases
ATGGAACGTTGCGTTCCGAAAATAAATAAACCAGAATGCAGCCCATCGAAGCCGTCGCTTCACTCCACGGGGCCTCGCAT
GCGTGATGATCCGTTCGTCCCCTGGCTGCGTGCGGCGCTGCTGGCCGCTGCGGCGCTGGCCGCGCCCTCGGTGGCGCTGG
CGCAAAACGGCAGCGACTACCCGAGCAGGCCGATCCGCCTGGTCGTGCCCTACCCGCCCGGCGGTGGCACCGACGTGATC
GCGCGCATCGTGCAAGAGCGCTTGCAGCCGCTGCTGGGCCAGCCGGTGCTGATCGACAACCGCGGCGGCGCTGCCGGCTC
CATCGGCACCGAACTGGTCGCCAAGTCGGCGCCCGACGGCTACACGGTGCTGTTCACGCTGTCCTCGCACACCATCAACC
CGGCCATCTACGCCAAGCTCGCGTTCGACACGGCGAAAGACTTCGCCCCCGTGGCCATGGTCGCCTCGCTGCCGCAGATC
CTGGTGGCCCACACGCAGTTCGCGCCCAACAGCGTGGCCGATCTGGTGGCGCTGGCCAAGACCCGGCCCGGCGCGATTTC
CTTTGCCTCGGCAGGCAACGGCTCGCCCGGGCATCTCGCCGGCGAACTGCTCAAACTGCGCACCGGCACCCGGATGACAC
ATATCCCCTACCGTGGCGGCGCTCCGGCCGTGACCGACGTGATTGGCGGCCAGGTGCCGCTGCTGTGGGTGTCGATTCCT
GCGGCGATGCAGTTCGTCAAAGCCGGCAAGCTCAAGGCGCTCGCGGTGTCGACCGCCCGGCGCAGCGCGGCATTGCCCGA
CTTGCCCACGATGCAGGAGGCCGGCATTGCCGACTTCAATGTCGACTCGTGGTACGCCATGTTCGTGCCCGCCAAAACGC
CGCAGCCGGCCATCGACAAGCTCAACCGCGCCATCAACGCGGTGCTCAGGCAGCCGGACCTGCGCGACAAGTTGCTGGCC
CAGGGCAGCGAAGGCGTTGGCGACACGCCGGAGCAACTCGGCCAGATCGTCAGCGCCGAACTCGTGCGCTGGCAGCAACT
GGCCAGGCAAGCCAACCTCCATCCCGATTGA

Upstream 100 bases:

>100_bases
GCGTGGGCGCTTGCGTGCCACTTCGGGCGCTGCTCGCAATACAGATGCAGTGAATCCGTCCACTGCAAGGCACGATGGCG
AATACGGGTAAATCATTAAA

Downstream 100 bases:

>100_bases
CTGGCGGCTCCCCATGGAACATTCCACTGCGCCCTCCAGCGCACCCTCGCCCATCACCGAACTGGTCGCGCGCGCCCGCG
CCGCGCAACGCATCTGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MERCVPKINKPECSPSKPSLHSTGPRMRDDPFVPWLRAALLAAAALAAPSVALAQNGSDYPSRPIRLVVPYPPGGGTDVI
ARIVQERLQPLLGQPVLIDNRGGAAGSIGTELVAKSAPDGYTVLFTLSSHTINPAIYAKLAFDTAKDFAPVAMVASLPQI
LVAHTQFAPNSVADLVALAKTRPGAISFASAGNGSPGHLAGELLKLRTGTRMTHIPYRGGAPAVTDVIGGQVPLLWVSIP
AAMQFVKAGKLKALAVSTARRSAALPDLPTMQEAGIADFNVDSWYAMFVPAKTPQPAIDKLNRAINAVLRQPDLRDKLLA
QGSEGVGDTPEQLGQIVSAELVRWQQLARQANLHPD

Sequences:

>Translated_356_residues
MERCVPKINKPECSPSKPSLHSTGPRMRDDPFVPWLRAALLAAAALAAPSVALAQNGSDYPSRPIRLVVPYPPGGGTDVI
ARIVQERLQPLLGQPVLIDNRGGAAGSIGTELVAKSAPDGYTVLFTLSSHTINPAIYAKLAFDTAKDFAPVAMVASLPQI
LVAHTQFAPNSVADLVALAKTRPGAISFASAGNGSPGHLAGELLKLRTGTRMTHIPYRGGAPAVTDVIGGQVPLLWVSIP
AAMQFVKAGKLKALAVSTARRSAALPDLPTMQEAGIADFNVDSWYAMFVPAKTPQPAIDKLNRAINAVLRQPDLRDKLLA
QGSEGVGDTPEQLGQIVSAELVRWQQLARQANLHPD
>Mature_356_residues
MERCVPKINKPECSPSKPSLHSTGPRMRDDPFVPWLRAALLAAAALAAPSVALAQNGSDYPSRPIRLVVPYPPGGGTDVI
ARIVQERLQPLLGQPVLIDNRGGAAGSIGTELVAKSAPDGYTVLFTLSSHTINPAIYAKLAFDTAKDFAPVAMVASLPQI
LVAHTQFAPNSVADLVALAKTRPGAISFASAGNGSPGHLAGELLKLRTGTRMTHIPYRGGAPAVTDVIGGQVPLLWVSIP
AAMQFVKAGKLKALAVSTARRSAALPDLPTMQEAGIADFNVDSWYAMFVPAKTPQPAIDKLNRAINAVLRQPDLRDKLLA
QGSEGVGDTPEQLGQIVSAELVRWQQLARQANLHPD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 37559; Mature: 37559

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERCVPKINKPECSPSKPSLHSTGPRMRDDPFVPWLRAALLAAAALAAPSVALAQNGSDY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PSRPIRLVVPYPPGGGTDVIARIVQERLQPLLGQPVLIDNRGGAAGSIGTELVAKSAPDG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCCC
YTVLFTLSSHTINPAIYAKLAFDTAKDFAPVAMVASLPQILVAHTQFAPNSVADLVALAK
EEEEEEECCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
TRPGAISFASAGNGSPGHLAGELLKLRTGTRMTHIPYRGGAPAVTDVIGGQVPLLWVSIP
CCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEEEEEHH
AAMQFVKAGKLKALAVSTARRSAALPDLPTMQEAGIADFNVDSWYAMFVPAKTPQPAIDK
HHHHHHHCCCCCEEEHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHH
LNRAINAVLRQPDLRDKLLAQGSEGVGDTPEQLGQIVSAELVRWQQLARQANLHPD
HHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERCVPKINKPECSPSKPSLHSTGPRMRDDPFVPWLRAALLAAAALAAPSVALAQNGSDY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PSRPIRLVVPYPPGGGTDVIARIVQERLQPLLGQPVLIDNRGGAAGSIGTELVAKSAPDG
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHCCCCCC
YTVLFTLSSHTINPAIYAKLAFDTAKDFAPVAMVASLPQILVAHTQFAPNSVADLVALAK
EEEEEEECCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
TRPGAISFASAGNGSPGHLAGELLKLRTGTRMTHIPYRGGAPAVTDVIGGQVPLLWVSIP
CCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCEEEEEEHH
AAMQFVKAGKLKALAVSTARRSAALPDLPTMQEAGIADFNVDSWYAMFVPAKTPQPAIDK
HHHHHHHCCCCCEEEHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCHHHHH
LNRAINAVLRQPDLRDKLLAQGSEGVGDTPEQLGQIVSAELVRWQQLARQANLHPD
HHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111902; 12910271; 2873570 [H]