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The map label for this gene is yebC [C]

Identifier: 121611154

GI number: 121611154

Start: 4667621

End: 4668340

Strand: Direct

Name: yebC [C]

Synonym: Veis_4238

Alternate gene names: 121611154

Gene position: 4667621-4668340 (Clockwise)

Preceding gene: 121611152

Following gene: 121611155

Centisome position: 83.85

GC content: 63.75

Gene sequence:

>720_bases
GTGGCAGGACACAGCAAATGGGCGAACATCCAACACCGCAAGGGACGGCAGGATGAAAAACGCGGCCGGATCTGGACCCG
CATCATGCGCGAAATCACCGTGGCGGCCCGCGCCGGTGGCGGCGATTTGTCGGCCAACCCGCGCCTGCGCCTGGCGCTGG
ACAAGGCCCGGGCGGCCAACATGCCGGCCGAGCGCATCAAGTACAACATCGACAAGGCCACCGGCAATGCAGAGGGCCAG
AGCTACGAAGAAATCCGCTACGAGGGCTACGGCATCGGCGGTGCGGCGATCATCGTCGACACCATGACCGACAACCGCCT
GCGCACCGTGGCCGAGGTGCGCCACGCCTTTAGCAAACATGGCGCCAACATGGGCACGGAAGGCTCGGTGGTGTTCCAAT
TCAAGCATTGCGGCCAGTTGGTCTATGCTCCTGGCAGCAGCGAAGACCAGGTGATGGAGGTGGCGCTTCAGGCCGGCGCC
GAAGATGTCATCATGGGCGAGGACGGCGCCATCGAGGTGTTGACCCTCCCCGCCGACTTTGAAGCCGTCAAGAACGCGCT
ACAGGCCGCCGGCCTCAGGCCCGAACTGGCCGAGGTCACCATGCGGGCCGAAAACACCATCGAACTACAAGGCGAGGACG
CGGCCCGGATGCAAAAACTGCTCGACGCGCTGGAAGATCTCGACGACACCCAAGCGGTCTATCACAACGCTACGCTATGA

Upstream 100 bases:

>100_bases
GCGCACATCCCGGTGGCGCTTGGGTCGGATCGGGGCGGACAAAAAAGCAAAAAAAGTAAACTCGCGCCGTAGGTTAAATC
AATCCCGTAAAGGACATTCC

Downstream 100 bases:

>100_bases
AGACCAGTTCCCATCCCCAGTGCTCCGGTCGTCATCGATTCTTGCCCCTGCATGGAGTATCCCTGTTGCCCGGTGCGGCA
TGTGGGAGCCTGGCATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAGHSKWANIQHRKGRQDEKRGRIWTRIMREITVAARAGGGDLSANPRLRLALDKARAANMPAERIKYNIDKATGNAEGQ
SYEEIRYEGYGIGGAAIIVDTMTDNRLRTVAEVRHAFSKHGANMGTEGSVVFQFKHCGQLVYAPGSSEDQVMEVALQAGA
EDVIMGEDGAIEVLTLPADFEAVKNALQAAGLRPELAEVTMRAENTIELQGEDAARMQKLLDALEDLDDTQAVYHNATL

Sequences:

>Translated_239_residues
MAGHSKWANIQHRKGRQDEKRGRIWTRIMREITVAARAGGGDLSANPRLRLALDKARAANMPAERIKYNIDKATGNAEGQ
SYEEIRYEGYGIGGAAIIVDTMTDNRLRTVAEVRHAFSKHGANMGTEGSVVFQFKHCGQLVYAPGSSEDQVMEVALQAGA
EDVIMGEDGAIEVLTLPADFEAVKNALQAAGLRPELAEVTMRAENTIELQGEDAARMQKLLDALEDLDDTQAVYHNATL
>Mature_238_residues
AGHSKWANIQHRKGRQDEKRGRIWTRIMREITVAARAGGGDLSANPRLRLALDKARAANMPAERIKYNIDKATGNAEGQS
YEEIRYEGYGIGGAAIIVDTMTDNRLRTVAEVRHAFSKHGANMGTEGSVVFQFKHCGQLVYAPGSSEDQVMEVALQAGAE
DVIMGEDGAIEVLTLPADFEAVKNALQAAGLRPELAEVTMRAENTIELQGEDAARMQKLLDALEDLDDTQAVYHNATL

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=245, Percent_Identity=26.1224489795918, Blast_Score=93, Evalue=2e-19,
Organism=Escherichia coli, GI1788171, Length=239, Percent_Identity=50.6276150627615, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=38.4615384615385, Blast_Score=151, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=24.390243902439, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=273, Percent_Identity=29.6703296703297, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583305, Length=247, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4238_VEREI (A1WQN6)

Other databases:

- EMBL:   CP000542
- RefSeq:   YP_998961.1
- ProteinModelPortal:   A1WQN6
- SMR:   A1WQN6
- STRING:   A1WQN6
- GeneID:   4694691
- GenomeReviews:   CP000542_GR
- KEGG:   vei:Veis_4238
- NMPDR:   fig|391735.5.peg.3885
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   A1WQN6
- ProtClustDB:   PRK00110
- BioCyc:   VEIS391735:VEIS_4238-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26094; Mature: 25963

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIQHRKGRQDEKRGRIWTRIMREITVAARAGGGDLSANPRLRLALDKARAAN
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCC
MPAERIKYNIDKATGNAEGQSYEEIRYEGYGIGGAAIIVDTMTDNRLRTVAEVRHAFSKH
CCHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
GANMGTEGSVVFQFKHCGQLVYAPGSSEDQVMEVALQAGAEDVIMGEDGAIEVLTLPADF
CCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCH
EAVKNALQAAGLRPELAEVTMRAENTIELQGEDAARMQKLLDALEDLDDTQAVYHNATL
HHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure 
AGHSKWANIQHRKGRQDEKRGRIWTRIMREITVAARAGGGDLSANPRLRLALDKARAAN
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHCC
MPAERIKYNIDKATGNAEGQSYEEIRYEGYGIGGAAIIVDTMTDNRLRTVAEVRHAFSKH
CCHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
GANMGTEGSVVFQFKHCGQLVYAPGSSEDQVMEVALQAGAEDVIMGEDGAIEVLTLPADF
CCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCH
EAVKNALQAAGLRPELAEVTMRAENTIELQGEDAARMQKLLDALEDLDDTQAVYHNATL
HHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA