| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611104
Identifier: 121611104
GI number: 121611104
Start: 4612021
End: 4613847
Strand: Direct
Name: 121611104
Synonym: Veis_4188
Alternate gene names: NA
Gene position: 4612021-4613847 (Clockwise)
Preceding gene: 121611103
Following gene: 121611105
Centisome position: 82.85
GC content: 68.14
Gene sequence:
>1827_bases ATGAACACGATCGCACACACATCCGCGTCCGCCGCGGACCGAACCCTCTACATCGGCGGCGCCTCCGGCTTCTGGGGCGA CTCGCAGATCGCCGTGCCGCAGTTGCTGCAGGCGCCCAAGCTCGACTACCTGGTGTTCGACTACTTGGCCGAGACCACGA TGTCGATTCTTCAGCGCGCGCGCCTACGTAACCCCGACCTCGGCTACGCGACCGACTTCATCACCACTGCCGTGAGGCCG AACCTGCGCGCACTGATGGAACGCAAGGTGCGCCTGGTCTCCAATGCCGGCGGCCTGAACCCCGCGAAGTGCCGAGATGC GCTGCTGGCGCTCGCTCATGAGCAAGGGCTCTCGCCGCGGATCGCCATCGTCACGGGCGATGACGTGCTCGAACTCGGTG CGCAGTTCCGCGACACGCCCGAAGCCGGCACCGCCACTGCCGCTCCGGCGCCGCTGATGTCGGCCAACGCGTACCTGGGC GCCTGGCCCATCGCCGAAGCCTTGCGCGCAGGCGCCGACATCGTCATCACCGGCCGCTGCGTCGACAGCGCCTCGCTGCT CGGCATTGCGGCCTATGAGTTCGGCTGGTCGTTCGACGAGTACGACAAGCTGGCCCAGGCCAGTCTCGCGGGCCACCTGA TCGAATGCGGCGCGCAGGCCACCGGTGGCCTCTTCACCGACTGGGAAACCGTGCCCGACTGGGCCGGCATCGGCTACCCG ATCGTCGAGCTGCGCGCCGACGGCAGCTTCGATCTGTCCAAGCCCGCGCACACGGGCGGGTGCATCCATCGCGCGACCGT GGCCGAACAGTTGCTCTACGAGATCGGCGACCCCACGCGCTACGCCCTGCCCGACGTGGTCTGCGACTTCACGCAGGTGC GCATCGAGAACAGTGGCGACGACCGCGTGCGCGTCACGGGCGCACGCGGACAGGCGCCGTCAGATGTCTACAAGGTAACG ACGACGTTCCAGAAGGGCTTCCAGATCGCGATCATGATGGCGATCCGCGGGCAGCGTGCCAAGGCTAAGGCCGAGCGCAC CGCACAGGAACTGCTCACCCGCACGCGGCGCCTCATGCAAGAGCAGGGCTTTGCCGACTACAGCGGCACGCTGGTGGAAC TGCTGGGCGCCGAGTCGATGTACGGTCCGCACCGCCGCGTGGAAGAAAGCCGCGAGATCGTGCTGCGCATCGCGGCCCAA CACGATGATCGCAAGGCGCTGGAGATCCTGCAGAAGGAATCCGCTTCGGCGGGCACCTCGATGGGGCCGGGCACGCGCAG CCACTTCGGCGGGCGCTCCGACGTACAGGGCGTAATCTGCACGGCGTCGTACTACATCGACAAGGCGCAGGTGCCGGTGC GGCTGCAGACCGATGCGCGCGAGCCCGCGATCACGTTGGCGGCGCCGGTGCCGCGTGCAGATTCGCGCGATGTTGCAACT ACATCGCAGCCCGACGCGCCGACACCGGCCGTTGATGAAGCCGACAGCGTGCGTGTGCCCCTGTCGCACTTGGCGCAAGC GCGCAGCGGGGACAAAGGCAACGACGCCAACATCGGCGTGCTCGCGCGCCAGCCCGAATGGGTGCCGGTTCTGCAGCAGC AGCTCACCGCCGCGCGCGTGCGCGACTACTTCGCGCACCTCATGGAAGGCCAGGTCACGCGCTTCGCGCTGCCCGGCATC GGCGCCTTCAACTTCTTTCTTGAGCGTGCACTCGGCGGCGGTGGCTCGTGCAGCCTGCGCTCCGACCCGCTCGGCAAGTG CTACGCCCAGATGCTGCTGGACATGGAGGTGTCCTGCCCCCGTGCCCTGCTGACGGCCGGCCCCTGA
Upstream 100 bases:
>100_bases TGCCGTTGTGCGCCCCCGGCGCGGGGGTGGTGGGACAGATCCTGGTGGAGGTGGGCAGCCAGCTCAGCGCCGGCCAGGTG CTGATGGAGCTCGTCGCCGA
Downstream 100 bases:
>100_bases GCGCCCGGCGCCCCGGAACAGATCACAAAAAAGGAGACATCCCATGCCGACCGCCAGAAGACAGTTCCTCGCCACCGCAC TCACTGCGGCACTTGCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MNTIAHTSASAADRTLYIGGASGFWGDSQIAVPQLLQAPKLDYLVFDYLAETTMSILQRARLRNPDLGYATDFITTAVRP NLRALMERKVRLVSNAGGLNPAKCRDALLALAHEQGLSPRIAIVTGDDVLELGAQFRDTPEAGTATAAPAPLMSANAYLG AWPIAEALRAGADIVITGRCVDSASLLGIAAYEFGWSFDEYDKLAQASLAGHLIECGAQATGGLFTDWETVPDWAGIGYP IVELRADGSFDLSKPAHTGGCIHRATVAEQLLYEIGDPTRYALPDVVCDFTQVRIENSGDDRVRVTGARGQAPSDVYKVT TTFQKGFQIAIMMAIRGQRAKAKAERTAQELLTRTRRLMQEQGFADYSGTLVELLGAESMYGPHRRVEESREIVLRIAAQ HDDRKALEILQKESASAGTSMGPGTRSHFGGRSDVQGVICTASYYIDKAQVPVRLQTDAREPAITLAAPVPRADSRDVAT TSQPDAPTPAVDEADSVRVPLSHLAQARSGDKGNDANIGVLARQPEWVPVLQQQLTAARVRDYFAHLMEGQVTRFALPGI GAFNFFLERALGGGGSCSLRSDPLGKCYAQMLLDMEVSCPRALLTAGP
Sequences:
>Translated_608_residues MNTIAHTSASAADRTLYIGGASGFWGDSQIAVPQLLQAPKLDYLVFDYLAETTMSILQRARLRNPDLGYATDFITTAVRP NLRALMERKVRLVSNAGGLNPAKCRDALLALAHEQGLSPRIAIVTGDDVLELGAQFRDTPEAGTATAAPAPLMSANAYLG AWPIAEALRAGADIVITGRCVDSASLLGIAAYEFGWSFDEYDKLAQASLAGHLIECGAQATGGLFTDWETVPDWAGIGYP IVELRADGSFDLSKPAHTGGCIHRATVAEQLLYEIGDPTRYALPDVVCDFTQVRIENSGDDRVRVTGARGQAPSDVYKVT TTFQKGFQIAIMMAIRGQRAKAKAERTAQELLTRTRRLMQEQGFADYSGTLVELLGAESMYGPHRRVEESREIVLRIAAQ HDDRKALEILQKESASAGTSMGPGTRSHFGGRSDVQGVICTASYYIDKAQVPVRLQTDAREPAITLAAPVPRADSRDVAT TSQPDAPTPAVDEADSVRVPLSHLAQARSGDKGNDANIGVLARQPEWVPVLQQQLTAARVRDYFAHLMEGQVTRFALPGI GAFNFFLERALGGGGSCSLRSDPLGKCYAQMLLDMEVSCPRALLTAGP >Mature_608_residues MNTIAHTSASAADRTLYIGGASGFWGDSQIAVPQLLQAPKLDYLVFDYLAETTMSILQRARLRNPDLGYATDFITTAVRP NLRALMERKVRLVSNAGGLNPAKCRDALLALAHEQGLSPRIAIVTGDDVLELGAQFRDTPEAGTATAAPAPLMSANAYLG AWPIAEALRAGADIVITGRCVDSASLLGIAAYEFGWSFDEYDKLAQASLAGHLIECGAQATGGLFTDWETVPDWAGIGYP IVELRADGSFDLSKPAHTGGCIHRATVAEQLLYEIGDPTRYALPDVVCDFTQVRIENSGDDRVRVTGARGQAPSDVYKVT TTFQKGFQIAIMMAIRGQRAKAKAERTAQELLTRTRRLMQEQGFADYSGTLVELLGAESMYGPHRRVEESREIVLRIAAQ HDDRKALEILQKESASAGTSMGPGTRSHFGGRSDVQGVICTASYYIDKAQVPVRLQTDAREPAITLAAPVPRADSRDVAT TSQPDAPTPAVDEADSVRVPLSHLAQARSGDKGNDANIGVLARQPEWVPVLQQQLTAARVRDYFAHLMEGQVTRFALPGI GAFNFFLERALGGGGSCSLRSDPLGKCYAQMLLDMEVSCPRALLTAGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65393; Mature: 65393
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIAHTSASAADRTLYIGGASGFWGDSQIAVPQLLQAPKLDYLVFDYLAETTMSILQRA CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RLRNPDLGYATDFITTAVRPNLRALMERKVRLVSNAGGLNPAKCRDALLALAHEQGLSPR HCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE IAIVTGDDVLELGAQFRDTPEAGTATAAPAPLMSANAYLGAWPIAEALRAGADIVITGRC EEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC VDSASLLGIAAYEFGWSFDEYDKLAQASLAGHLIECGAQATGGLFTDWETVPDWAGIGYP CCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC IVELRADGSFDLSKPAHTGGCIHRATVAEQLLYEIGDPTRYALPDVVCDFTQVRIENSGD EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHEEEECCCC DRVRVTGARGQAPSDVYKVTTTFQKGFQIAIMMAIRGQRAKAKAERTAQELLTRTRRLMQ CEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH EQGFADYSGTLVELLGAESMYGPHRRVEESREIVLRIAAQHDDRKALEILQKESASAGTS HCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHCCCCCCC MGPGTRSHFGGRSDVQGVICTASYYIDKAQVPVRLQTDAREPAITLAAPVPRADSRDVAT CCCCCHHCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCCCCCCC TSQPDAPTPAVDEADSVRVPLSHLAQARSGDKGNDANIGVLARQPEWVPVLQQQLTAARV CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH RDYFAHLMEGQVTRFALPGIGAFNFFLERALGGGGSCSLRSDPLGKCYAQMLLDMEVSCP HHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RALLTAGP HHHHCCCC >Mature Secondary Structure MNTIAHTSASAADRTLYIGGASGFWGDSQIAVPQLLQAPKLDYLVFDYLAETTMSILQRA CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RLRNPDLGYATDFITTAVRPNLRALMERKVRLVSNAGGLNPAKCRDALLALAHEQGLSPR HCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCE IAIVTGDDVLELGAQFRDTPEAGTATAAPAPLMSANAYLGAWPIAEALRAGADIVITGRC EEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC VDSASLLGIAAYEFGWSFDEYDKLAQASLAGHLIECGAQATGGLFTDWETVPDWAGIGYP CCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC IVELRADGSFDLSKPAHTGGCIHRATVAEQLLYEIGDPTRYALPDVVCDFTQVRIENSGD EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHEEEECCCC DRVRVTGARGQAPSDVYKVTTTFQKGFQIAIMMAIRGQRAKAKAERTAQELLTRTRRLMQ CEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH EQGFADYSGTLVELLGAESMYGPHRRVEESREIVLRIAAQHDDRKALEILQKESASAGTS HCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHCCCCCCC MGPGTRSHFGGRSDVQGVICTASYYIDKAQVPVRLQTDAREPAITLAAPVPRADSRDVAT CCCCCHHCCCCCCCCCEEEEEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCCCCCCC TSQPDAPTPAVDEADSVRVPLSHLAQARSGDKGNDANIGVLARQPEWVPVLQQQLTAARV CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH RDYFAHLMEGQVTRFALPGIGAFNFFLERALGGGGSCSLRSDPLGKCYAQMLLDMEVSCP HHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC RALLTAGP HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA