| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is yngE [H]
Identifier: 121611099
GI number: 121611099
Start: 4605112
End: 4606773
Strand: Direct
Name: yngE [H]
Synonym: Veis_4183
Alternate gene names: 121611099
Gene position: 4605112-4606773 (Clockwise)
Preceding gene: 121611098
Following gene: 121611100
Centisome position: 82.73
GC content: 68.53
Gene sequence:
>1662_bases ATGTGGCGCCTCGCAGGCGGCACGATCGACGAGGAGCAGATGACGACACTTGCATCGAACCTGGCACCGGCCAGCCCCGC GTACACGCGCAACAAAGCCCACATGCTGGATCTGGTGGAACAGGTGCGCGCGCTCGAGCAGCGCGCGGTCCTGCGCTCGG CGCGCTCGGCCGCCAACTTTCACGCGCGCGGCAAGCTGCTGCCGCGTGAACGGCTCGCCCACCTGCTGGACTCGGGCCGC CCCTTTCTCGAACTGATGACGCTGGCGGGCTACTGCGGCATCGAGGACCGCGACCCAGCCACCAGCATCCCGGGCAGCGC GCTGATCGTGGGCATCGGCCACATCTCGGGCGTGCGCTGCATGGTCGCCGTGAACGACGCGGGCATCAGCGCCGGCGCGA TGCAGTCACTCACCGGCCAGAAGTTGATCCGTGCGCAAGAGATCGCGCTCGCGCACAAGCTGCCTTTCGTGCAGCTGGTG GAAAGCGCGGGCGGCAACCTCAAGAAGTACCGCGTCGAGCGCTTCATCGTCGGCGGCGGCATGTTCTACAACCTCGCGCG GTTGTCGGCGGCGGGACTGCCGGTGATTTCGCTCATCCACGGCTCGTCGGCCGCCGGCGGCGCCTATCTGCCAGGGCTGT CCGATTACGTGGTCATGGTGCGCCAGCAGGCGCGCGCTTTTCTCGCGGGTCCCGCGCTGCTCAAGGCGGCCACGGGCGAA GAAGCCACCGAGGAAGAACTCGGCGGTGCCGACATGCACGCGCGCACCTCGGGCCTGGCCGACTACGTGGCCGAGAACGA CCTGGACGGCATCGCGCGCATCCGCGACATCCTGCGCGCGATCGGCTGGACCGACACCGCGGTATTGCCGGCTTCGCCCA TCCGTCCACCGCGCCATGACCGCGAAGACCTGCTGGGCGTGATGCCCGCTGACGCTCGCACGCCGGTGGACATGCGCGAA GTCATCGCACGCCTGGTCGACGACTCGGACTTCCACGAGTTCAAGCAGCTGTATGGTGCACCCACCGTGTGCGGCTACGC CACCGTGCACGGCCAGCCGGTCGGCATCCTCACCAACAACGGGCCGCTCGATCCGGCGGGGGCCACCAAGGCCGCCGAGT TCATCCAGCTGTGCGTGCAGCTGGACCGCCCGATCCTGTTCCTGCAGAACATCACCGGCTTCATCGTCGGCCGCGCGCAC GAAGAGGCCGGGATGATCAAGCACGGCGCCAAGCTGATCCAGGCGCTGTCGAACGCGCCCGTGCCGCGCATCACGCTGCT GTGCGGCGCCTCGTTCGGTGCCGGCAACTACGGCATGTGCGGCCGCGCGTTCAAGCCCGACTTTTTGTTCTCGTGGCCCA ACGCCAAGACCGCCGTGATGGGCGGCGAGCAGGCTGCGATGACGATGCGCATGGTGGCCGAGGGCGCCGCACGGCGCGCG GGACGCGCGGTCGACGAAGACGCACTGGCCCAGGAGAGCCGCGAGATCGTCGACAACTTCAACGAGCAGTCGACCGCCAT CTACACCAGCAGCCTGCTGCTGGACGACGGAATCATCGACCCGCGCAACACGCGCGAAGTGCTCGGCGTGGTGCTCAAGA CCGCCGCCGCCGCGAAGACGCGCCCCGTCATCCCGATCCAGTTCGGCGTCGCGCGCTTCTGA
Upstream 100 bases:
>100_bases ATCAGTTCGGTCTGAAAATCTTGATGGAAATCGGTGCACCCCACTGCCATCATCCCCGACAGACAGGGCATGCACGGCAC CGCACCGTGGTCAACCACCC
Downstream 100 bases:
>100_bases CGCGCGCCCTGTTCCCCACACGACAACAAGAGACAAGACAGAAATGACCATCGATCGACGTGTGATGCTGGCCACCATGG CCACCATGGCCGGCTTGGCC
Product: propionyl-CoA carboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MWRLAGGTIDEEQMTTLASNLAPASPAYTRNKAHMLDLVEQVRALEQRAVLRSARSAANFHARGKLLPRERLAHLLDSGR PFLELMTLAGYCGIEDRDPATSIPGSALIVGIGHISGVRCMVAVNDAGISAGAMQSLTGQKLIRAQEIALAHKLPFVQLV ESAGGNLKKYRVERFIVGGGMFYNLARLSAAGLPVISLIHGSSAAGGAYLPGLSDYVVMVRQQARAFLAGPALLKAATGE EATEEELGGADMHARTSGLADYVAENDLDGIARIRDILRAIGWTDTAVLPASPIRPPRHDREDLLGVMPADARTPVDMRE VIARLVDDSDFHEFKQLYGAPTVCGYATVHGQPVGILTNNGPLDPAGATKAAEFIQLCVQLDRPILFLQNITGFIVGRAH EEAGMIKHGAKLIQALSNAPVPRITLLCGASFGAGNYGMCGRAFKPDFLFSWPNAKTAVMGGEQAAMTMRMVAEGAARRA GRAVDEDALAQESREIVDNFNEQSTAIYTSSLLLDDGIIDPRNTREVLGVVLKTAAAAKTRPVIPIQFGVARF
Sequences:
>Translated_553_residues MWRLAGGTIDEEQMTTLASNLAPASPAYTRNKAHMLDLVEQVRALEQRAVLRSARSAANFHARGKLLPRERLAHLLDSGR PFLELMTLAGYCGIEDRDPATSIPGSALIVGIGHISGVRCMVAVNDAGISAGAMQSLTGQKLIRAQEIALAHKLPFVQLV ESAGGNLKKYRVERFIVGGGMFYNLARLSAAGLPVISLIHGSSAAGGAYLPGLSDYVVMVRQQARAFLAGPALLKAATGE EATEEELGGADMHARTSGLADYVAENDLDGIARIRDILRAIGWTDTAVLPASPIRPPRHDREDLLGVMPADARTPVDMRE VIARLVDDSDFHEFKQLYGAPTVCGYATVHGQPVGILTNNGPLDPAGATKAAEFIQLCVQLDRPILFLQNITGFIVGRAH EEAGMIKHGAKLIQALSNAPVPRITLLCGASFGAGNYGMCGRAFKPDFLFSWPNAKTAVMGGEQAAMTMRMVAEGAARRA GRAVDEDALAQESREIVDNFNEQSTAIYTSSLLLDDGIIDPRNTREVLGVVLKTAAAAKTRPVIPIQFGVARF >Mature_553_residues MWRLAGGTIDEEQMTTLASNLAPASPAYTRNKAHMLDLVEQVRALEQRAVLRSARSAANFHARGKLLPRERLAHLLDSGR PFLELMTLAGYCGIEDRDPATSIPGSALIVGIGHISGVRCMVAVNDAGISAGAMQSLTGQKLIRAQEIALAHKLPFVQLV ESAGGNLKKYRVERFIVGGGMFYNLARLSAAGLPVISLIHGSSAAGGAYLPGLSDYVVMVRQQARAFLAGPALLKAATGE EATEEELGGADMHARTSGLADYVAENDLDGIARIRDILRAIGWTDTAVLPASPIRPPRHDREDLLGVMPADARTPVDMRE VIARLVDDSDFHEFKQLYGAPTVCGYATVHGQPVGILTNNGPLDPAGATKAAEFIQLCVQLDRPILFLQNITGFIVGRAH EEAGMIKHGAKLIQALSNAPVPRITLLCGASFGAGNYGMCGRAFKPDFLFSWPNAKTAVMGGEQAAMTMRMVAEGAARRA GRAVDEDALAQESREIVDNFNEQSTAIYTSSLLLDDGIIDPRNTREVLGVVLKTAAAAKTRPVIPIQFGVARF
Specific function: Unknown
COG id: COG4799
COG function: function code I; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI11545863, Length=550, Percent_Identity=42.3636363636364, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI119943100, Length=417, Percent_Identity=31.1750599520384, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI295821216, Length=437, Percent_Identity=29.5194508009153, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI310133460, Length=139, Percent_Identity=41.726618705036, Blast_Score=91, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17552936, Length=544, Percent_Identity=40.0735294117647, Blast_Score=418, Evalue=1e-117, Organism=Caenorhabditis elegans, GI25147362, Length=512, Percent_Identity=30.859375, Blast_Score=235, Evalue=6e-62, Organism=Caenorhabditis elegans, GI25147359, Length=514, Percent_Identity=30.9338521400778, Blast_Score=234, Evalue=6e-62, Organism=Drosophila melanogaster, GI24586065, Length=558, Percent_Identity=41.7562724014337, Blast_Score=432, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000022 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: NA
Molecular weight: Translated: 59076; Mature: 59076
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRLAGGTIDEEQMTTLASNLAPASPAYTRNKAHMLDLVEQVRALEQRAVLRSARSAANF CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH HARGKLLPRERLAHLLDSGRPFLELMTLAGYCGIEDRDPATSIPGSALIVGIGHISGVRC HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEE MVAVNDAGISAGAMQSLTGQKLIRAQEIALAHKLPFVQLVESAGGNLKKYRVERFIVGGG EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHEEEEEEEECCH MFYNLARLSAAGLPVISLIHGSSAAGGAYLPGLSDYVVMVRQQARAFLAGPALLKAATGE HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCC EATEEELGGADMHARTSGLADYVAENDLDGIARIRDILRAIGWTDTAVLPASPIRPPRHD CHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC REDLLGVMPADARTPVDMREVIARLVDDSDFHEFKQLYGAPTVCGYATVHGQPVGILTNN HHHHHEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEECC GPLDPAGATKAAEFIQLCVQLDRPILFLQNITGFIVGRAHEEAGMIKHGAKLIQALSNAP CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHEEECCHHHHHHHHHHHHHHHHHHCCC VPRITLLCGASFGAGNYGMCGRAFKPDFLFSWPNAKTAVMGGEQAAMTMRMVAEGAARRA CCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHH GRAVDEDALAQESREIVDNFNEQSTAIYTSSLLLDDGIIDPRNTREVLGVVLKTAAAAKT CCCCCHHHHHHHHHHHHHCCCCCHHEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC RPVIPIQFGVARF CCCEEECCCCCCC >Mature Secondary Structure MWRLAGGTIDEEQMTTLASNLAPASPAYTRNKAHMLDLVEQVRALEQRAVLRSARSAANF CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH HARGKLLPRERLAHLLDSGRPFLELMTLAGYCGIEDRDPATSIPGSALIVGIGHISGVRC HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEE MVAVNDAGISAGAMQSLTGQKLIRAQEIALAHKLPFVQLVESAGGNLKKYRVERFIVGGG EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHEEEEEEEECCH MFYNLARLSAAGLPVISLIHGSSAAGGAYLPGLSDYVVMVRQQARAFLAGPALLKAATGE HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCC EATEEELGGADMHARTSGLADYVAENDLDGIARIRDILRAIGWTDTAVLPASPIRPPRHD CHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC REDLLGVMPADARTPVDMREVIARLVDDSDFHEFKQLYGAPTVCGYATVHGQPVGILTNN HHHHHEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCEEEEEECC GPLDPAGATKAAEFIQLCVQLDRPILFLQNITGFIVGRAHEEAGMIKHGAKLIQALSNAP CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHEEECCHHHHHHHHHHHHHHHHHHCCC VPRITLLCGASFGAGNYGMCGRAFKPDFLFSWPNAKTAVMGGEQAAMTMRMVAEGAARRA CCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHH GRAVDEDALAQESREIVDNFNEQSTAIYTSSLLLDDGIIDPRNTREVLGVVLKTAAAAKT CCCCCHHHHHHHHHHHHHCCCCCHHEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC RPVIPIQFGVARF CCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9387222 [H]