| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611070
Identifier: 121611070
GI number: 121611070
Start: 4571705
End: 4572052
Strand: Direct
Name: 121611070
Synonym: Veis_4154
Alternate gene names: NA
Gene position: 4571705-4572052 (Clockwise)
Preceding gene: 121611069
Following gene: 121611075
Centisome position: 82.13
GC content: 72.7
Gene sequence:
>348_bases ATGCCGAAAACCACTTTCGCACCTTTCGCGGCCATGCTCGGCGGCCTGGCCACGGTGCTGACGCTGGCCGCTTGCGCCGG CAACGGGCAGACCCCGGCAGCGCCCGGTGCCGCGGCTGCTGCGGCTGCTGCGGCTGCCCCGGGGGGACTGTGCAATGCGC AGCCGGCGCAGGTGGTGCTGGGGCAAAGCAGCACGGCATCGGTGGTGGAGTCCGCAAGGGCGCGCTCCGGCGCGCGGATG GCGCGCATCCTGCGGCCCGGGCAGACCATCACCAAGGAGTTCAACGCGCAGCGGCTCAGCCTGCAGGTGGACGGCAACGG CCGCATCATCACCGCGCGCTGCGGCTGA
Upstream 100 bases:
>100_bases AGACGCGCGGGCTGCGGCATCTGCGGCCCTTGCTGCGTCGCCTGCGGCGTGCGCGCCTGGAGGCTGTATCGTGACGGCCC CGTCTTTCAGGAACTGCCCC
Downstream 100 bases:
>100_bases GCGCTGCGCGCATTGCCGTCGAGCGCGCTGCGCGTTGCAGTTGATCGCGCCGTGCGCAGGCCGTGGCGGCGGCCGCCGAT CGCCCCCGATCAGCGCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MPKTTFAPFAAMLGGLATVLTLAACAGNGQTPAAPGAAAAAAAAAAPGGLCNAQPAQVVLGQSSTASVVESARARSGARM ARILRPGQTITKEFNAQRLSLQVDGNGRIITARCG
Sequences:
>Translated_115_residues MPKTTFAPFAAMLGGLATVLTLAACAGNGQTPAAPGAAAAAAAAAAPGGLCNAQPAQVVLGQSSTASVVESARARSGARM ARILRPGQTITKEFNAQRLSLQVDGNGRIITARCG >Mature_114_residues PKTTFAPFAAMLGGLATVLTLAACAGNGQTPAAPGAAAAAAAAAAPGGLCNAQPAQVVLGQSSTASVVESARARSGARMA RILRPGQTITKEFNAQRLSLQVDGNGRIITARCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11305; Mature: 11174
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTTFAPFAAMLGGLATVLTLAACAGNGQTPAAPGAAAAAAAAAAPGGLCNAQPAQVVL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEE GQSSTASVVESARARSGARMARILRPGQTITKEFNAQRLSLQVDGNGRIITARCG CCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHCCCEEEEEEECCCCEEEEEECC >Mature Secondary Structure PKTTFAPFAAMLGGLATVLTLAACAGNGQTPAAPGAAAAAAAAAAPGGLCNAQPAQVVL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEE GQSSTASVVESARARSGARMARILRPGQTITKEFNAQRLSLQVDGNGRIITARCG CCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHCCCEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA