| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is livK [C]
Identifier: 121611028
GI number: 121611028
Start: 4510610
End: 4511797
Strand: Direct
Name: livK [C]
Synonym: Veis_4112
Alternate gene names: 121611028
Gene position: 4510610-4511797 (Clockwise)
Preceding gene: 121611027
Following gene: 121611029
Centisome position: 81.03
GC content: 65.15
Gene sequence:
>1188_bases ATGTTCAAACACACGAAACTTCACCCGCTGCTGGCCGGCACCGCGCTGCTGGCAGCCCTGCCCCTGGCGGTCTGCGCGCA GGGCAAAGAGCCGATCAGGATCGGCCTGGTCACTTCCAGGTCGGGTGGCTTTTCCACCATGGGCGCGGACGTGGCCAGGG GCATCGGGTTTGCCGTCGATGAAGCCAACGCCAAGGGCGGGGTCGATGGCCGCCGGATCATCCTGGCCGAAGGCGACGAC GAGAGCACCCCCGATGCCGGCCGGCGCGTGGCCGAGAAACTGGCCCGCGACGGACACAATCTGCTGATCGGCCCCATCAC CTCCTCCATTTCGCTGGCCATCAGCCAGAATCTGGCGCGCTGGGATGCGGCCTTCATCGGCACCATCAGCAAGGCGGACA AGCTCACCACCGACGCCTGCAATCCGCGCTTCGTGCGCACCAACCATTCCGACGCCATGGATCTGGCAATGATCGGCGAA TGGGTCAAGGGCATCGAGGGCAACGACTTCGCCATCCTGGCTGCCGACTATGTCTGGGGGCAGGACTCGGCCAAGTCGTT CGAGGCCGCCGTGACCGCGCAAGGCAAGAAGGTTTCGCTCAAGCTCTTCGCTCCGCTCGGGACCAAGGACTATGCGCCCT ACATCCAGCAGATCAAGGCCGCCAACGTGGATGCCATCTGGGTTGCCGATGTCTCCGGTGGCATCGCCTTCGTCAAGCAG GCGGCCGACTTCAACCTGATCCCCAAGACCCCGCTGATCGGCCACGCCCTGGTATCGAACTTCGTCATCGATGCCACGGG CAAGGCAATGGCCAATGTGCCGGGCAACGTGGGCTTCACGCCGGACATCGACACACCGCAGACCAAAGCCTTCGTCAGCG CGTTCAAGGCCAGGCACCACCGTCTGCCGTCGGACACCGAAGGCCAGGCATACAACGGCGCCATGGTGCTGTTTCAGGGG GTCACGCTGGCCAAGAGCGTGCAGCCCGAGGCCGTCACCAAGGCGCTGCGCGGCGCCCGGGTGGATACGCTGTACGGGAA GATGACGATCCGCGCGGCGGACAACCAGTTGGTCATGCCCAACTACGTGGCGCGCGTCAAGATGGCCGACGGTGTGCTGC GGCCCGTGATCGAGCACACTTACCCGGCTTCGCTCGTGCCGGCGGCCTCGCCCCTGTGCAAGATGTAG
Upstream 100 bases:
>100_bases TCTGGCAGACATTGAAGAACACGTAATGGTCTGACACGGACCGTCTTGCGTGATGGTGGCAACCGGAGCCTTTGCGGCTA TTTGGAAAAGAGGAACGAGC
Downstream 100 bases:
>100_bases GGCCAGCACCTGCCGGTGCCTGCCCTGTATGAACGCCCCGGCGCGATGGCCCTCGGCGCCCCAGATCGCCCCCAGATCGC CCCCGGATCGCCCCCGCATC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MFKHTKLHPLLAGTALLAALPLAVCAQGKEPIRIGLVTSRSGGFSTMGADVARGIGFAVDEANAKGGVDGRRIILAEGDD ESTPDAGRRVAEKLARDGHNLLIGPITSSISLAISQNLARWDAAFIGTISKADKLTTDACNPRFVRTNHSDAMDLAMIGE WVKGIEGNDFAILAADYVWGQDSAKSFEAAVTAQGKKVSLKLFAPLGTKDYAPYIQQIKAANVDAIWVADVSGGIAFVKQ AADFNLIPKTPLIGHALVSNFVIDATGKAMANVPGNVGFTPDIDTPQTKAFVSAFKARHHRLPSDTEGQAYNGAMVLFQG VTLAKSVQPEAVTKALRGARVDTLYGKMTIRAADNQLVMPNYVARVKMADGVLRPVIEHTYPASLVPAASPLCKM
Sequences:
>Translated_395_residues MFKHTKLHPLLAGTALLAALPLAVCAQGKEPIRIGLVTSRSGGFSTMGADVARGIGFAVDEANAKGGVDGRRIILAEGDD ESTPDAGRRVAEKLARDGHNLLIGPITSSISLAISQNLARWDAAFIGTISKADKLTTDACNPRFVRTNHSDAMDLAMIGE WVKGIEGNDFAILAADYVWGQDSAKSFEAAVTAQGKKVSLKLFAPLGTKDYAPYIQQIKAANVDAIWVADVSGGIAFVKQ AADFNLIPKTPLIGHALVSNFVIDATGKAMANVPGNVGFTPDIDTPQTKAFVSAFKARHHRLPSDTEGQAYNGAMVLFQG VTLAKSVQPEAVTKALRGARVDTLYGKMTIRAADNQLVMPNYVARVKMADGVLRPVIEHTYPASLVPAASPLCKM >Mature_395_residues MFKHTKLHPLLAGTALLAALPLAVCAQGKEPIRIGLVTSRSGGFSTMGADVARGIGFAVDEANAKGGVDGRRIILAEGDD ESTPDAGRRVAEKLARDGHNLLIGPITSSISLAISQNLARWDAAFIGTISKADKLTTDACNPRFVRTNHSDAMDLAMIGE WVKGIEGNDFAILAADYVWGQDSAKSFEAAVTAQGKKVSLKLFAPLGTKDYAPYIQQIKAANVDAIWVADVSGGIAFVKQ AADFNLIPKTPLIGHALVSNFVIDATGKAMANVPGNVGFTPDIDTPQTKAFVSAFKARHHRLPSDTEGQAYNGAMVLFQG VTLAKSVQPEAVTKALRGARVDTLYGKMTIRAADNQLVMPNYVARVKMADGVLRPVIEHTYPASLVPAASPLCKM
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41820; Mature: 41820
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKHTKLHPLLAGTALLAALPLAVCAQGKEPIRIGLVTSRSGGFSTMGADVARGIGFAVD CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEE EANAKGGVDGRRIILAEGDDESTPDAGRRVAEKLARDGHNLLIGPITSSISLAISQNLAR CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH WDAAFIGTISKADKLTTDACNPRFVRTNHSDAMDLAMIGEWVKGIEGNDFAILAADYVWG HHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEC QDSAKSFEAAVTAQGKKVSLKLFAPLGTKDYAPYIQQIKAANVDAIWVADVSGGIAFVKQ CCCHHHHHHHEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH AADFNLIPKTPLIGHALVSNFVIDATGKAMANVPGNVGFTPDIDTPQTKAFVSAFKARHH HCCCCCCCCCCCHHHHHHHHEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC RLPSDTEGQAYNGAMVLFQGVTLAKSVQPEAVTKALRGARVDTLYGKMTIRAADNQLVMP CCCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCEECC NYVARVKMADGVLRPVIEHTYPASLVPAASPLCKM HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC >Mature Secondary Structure MFKHTKLHPLLAGTALLAALPLAVCAQGKEPIRIGLVTSRSGGFSTMGADVARGIGFAVD CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEE EANAKGGVDGRRIILAEGDDESTPDAGRRVAEKLARDGHNLLIGPITSSISLAISQNLAR CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH WDAAFIGTISKADKLTTDACNPRFVRTNHSDAMDLAMIGEWVKGIEGNDFAILAADYVWG HHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEC QDSAKSFEAAVTAQGKKVSLKLFAPLGTKDYAPYIQQIKAANVDAIWVADVSGGIAFVKQ CCCHHHHHHHEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH AADFNLIPKTPLIGHALVSNFVIDATGKAMANVPGNVGFTPDIDTPQTKAFVSAFKARHH HCCCCCCCCCCCHHHHHHHHEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC RLPSDTEGQAYNGAMVLFQGVTLAKSVQPEAVTKALRGARVDTLYGKMTIRAADNQLVMP CCCCCCCCCCCCCEEEEEECCHHHHCCCHHHHHHHHHCCCEEEEEEEEEEEECCCCEECC NYVARVKMADGVLRPVIEHTYPASLVPAASPLCKM HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA