| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611008
Identifier: 121611008
GI number: 121611008
Start: 4488376
End: 4489935
Strand: Direct
Name: 121611008
Synonym: Veis_4092
Alternate gene names: NA
Gene position: 4488376-4489935 (Clockwise)
Preceding gene: 121611000
Following gene: 121611011
Centisome position: 80.63
GC content: 69.29
Gene sequence:
>1560_bases ATGACTGCGCTGGCGCCGCTGACGATTCCGGTGTTCCGCATGTTGTGGCTGACCTGGGTGACGGCCAATACCTGCATGTG GATGAACGATGTGGCGGCGGCCTGGCTGATGACCACGCTGACCAGTTCGCCGATCCTGGTCGCGCTGGTGCAGTCGGCGT CCACGCTGCCGGTGTTTTTGCTCGGTCTGCCCAGCGGCGCGCTGGCCGACATTCTGGACCGGCGGCGCTATTTCATCGTC ACCCAGTTCTGGGTTGCGGCCGTGGCGCTGGTGCTGTGCCTGGCCATCCTGGCCGGCGGCATGACGGCGCCACTGCTGCT GGCGCTGACTTTTGCCAACGGCATCGGTCTGGCGATGCGCTGGCCGGTGTTCGCGGCCATCGTGCCCGAATTGGTCGCGC GCGCGCAGTTGCCTGCGGCGCTGGCGCTCAACGGCGTGGCCATGAATGCCTCGCGCATCATGGGCCCGCTGCTGGCCGGG GCCATCATTGCCAGCGCGGGCAGCGCCTGGGTGTTCGTGCTCAATGCCGTGCTGTCGGTGCTGTCCGGCCTGGTCATCAT GCGCTGGAAGCGCGTCCATGTGCCCAACCCGCTGGGGCGCGAGCGCCTGCCCAGCGCGATGCGCGTGGGCCTGCAATTCG TGGGCCAGTCGCCGCGCATGAGGGCGGTGATGTGGCGCATCTCGATCTTCTTTTTGCACGCCACCGCGCTGCTGGCGCTG TTGCCGCTGCTGGCCCGGGGGCTGGAGGGCGGCGGCGCCGGCACCTTTACGCTGCTGCTGGCGTCAATGGGCGCGGGGGC GATCTCGGCGGCGCTGTTTTTGCCGCGCCTGCGCCAGGCCATGGCGGGCGACACGCTGGTGATCCGCGGCACCCTGCTGC AGGCGGCGGCCACCGGGGTGATGGCCATCGCGCCGAATGTCCAGGTGGCCGTGCCGGCGATGTTCATCGGCGGCATGGCC TGGATCACCACGGCCAACTCGCTGAGCGTGTCGGCCCAACTGGCGCTGCCCAACTGGGTGCGCGCCCGGGGCATGTCGAT CTACCAGATGGCCATCATGGGCTCGACCGCGCTGGGCGCCGCGCTGTGGGGCCAGGTGGCCACGCTCGGCAATGTGCACC TGAGCCTGGGGCTGTCGGCGCTCTCCGGGGTGTTGGCGATGCTGCTGGTGCAGCGCCTGGTGGCCGACCGCAGCATCGAA GAAGACCTGAGCCCCTCGCGCGCCTTCAAGGCGCCGGTGCTCGACATCCCGCCGGAATCGGGCCATGTGGTGGTGACCAT CGAATACTTCATCGACCCGGCGCGCGCGGCGGAATTTCGCGCGCTGATGCAAGACAGCCGGCGCAGCCGCCTGCGCCAGG GCGCATTGGCCTGGCAGCTACAGCACGATATCACCGACCCCGCGCGCTATGTCGAGCAGATCGAGGATGAATCCTGGACC GAGCACCTGCGCCGCTTCGACCGCGTCACCGCCCACGACGTGGCGCTGCGCGAGCGCAAACTGGCGTTCCACACCCGGGA CACACCGCCCGTGGTCTCGCGCCTGCTGGTGCAGCGCTGA
Upstream 100 bases:
>100_bases CGCAGCCGCAGCCGAGTGCGCCGCCCGGGCCCGGGGCACGGAAGAATCCGTGGCCGCGCGGCTGGCGCAGGACGCGGCGC CGCTGGGCCAGAGCGCGTCG
Downstream 100 bases:
>100_bases GTCCGGCCTGCTCCCCCGGAACGCCAGCGGCCTGGCCCCGGGCCCGTTGGCGTAGCCCGCCGGCAGGCGACGCGCTCGTT GCCTGCGCTGGCGCGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Transporter; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; MFS Transporter; Transmembrane Efflux Protein; Multidrug ABC Transporter; Permeases Of Facilitator Superfamily; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Transport Transmembrane Protein; MFS Family Transporter Protein; Permease; Facilitator Transpoter; Macrolide-Efflux Protein; Transporter Facilitator Family; Facilitator Superfamily Transmembrane Transporter; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein; ABC Transporter Permease Protein; MFS Superfamily Transporter
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MTALAPLTIPVFRMLWLTWVTANTCMWMNDVAAAWLMTTLTSSPILVALVQSASTLPVFLLGLPSGALADILDRRRYFIV TQFWVAAVALVLCLAILAGGMTAPLLLALTFANGIGLAMRWPVFAAIVPELVARAQLPAALALNGVAMNASRIMGPLLAG AIIASAGSAWVFVLNAVLSVLSGLVIMRWKRVHVPNPLGRERLPSAMRVGLQFVGQSPRMRAVMWRISIFFLHATALLAL LPLLARGLEGGGAGTFTLLLASMGAGAISAALFLPRLRQAMAGDTLVIRGTLLQAAATGVMAIAPNVQVAVPAMFIGGMA WITTANSLSVSAQLALPNWVRARGMSIYQMAIMGSTALGAALWGQVATLGNVHLSLGLSALSGVLAMLLVQRLVADRSIE EDLSPSRAFKAPVLDIPPESGHVVVTIEYFIDPARAAEFRALMQDSRRSRLRQGALAWQLQHDITDPARYVEQIEDESWT EHLRRFDRVTAHDVALRERKLAFHTRDTPPVVSRLLVQR
Sequences:
>Translated_519_residues MTALAPLTIPVFRMLWLTWVTANTCMWMNDVAAAWLMTTLTSSPILVALVQSASTLPVFLLGLPSGALADILDRRRYFIV TQFWVAAVALVLCLAILAGGMTAPLLLALTFANGIGLAMRWPVFAAIVPELVARAQLPAALALNGVAMNASRIMGPLLAG AIIASAGSAWVFVLNAVLSVLSGLVIMRWKRVHVPNPLGRERLPSAMRVGLQFVGQSPRMRAVMWRISIFFLHATALLAL LPLLARGLEGGGAGTFTLLLASMGAGAISAALFLPRLRQAMAGDTLVIRGTLLQAAATGVMAIAPNVQVAVPAMFIGGMA WITTANSLSVSAQLALPNWVRARGMSIYQMAIMGSTALGAALWGQVATLGNVHLSLGLSALSGVLAMLLVQRLVADRSIE EDLSPSRAFKAPVLDIPPESGHVVVTIEYFIDPARAAEFRALMQDSRRSRLRQGALAWQLQHDITDPARYVEQIEDESWT EHLRRFDRVTAHDVALRERKLAFHTRDTPPVVSRLLVQR >Mature_518_residues TALAPLTIPVFRMLWLTWVTANTCMWMNDVAAAWLMTTLTSSPILVALVQSASTLPVFLLGLPSGALADILDRRRYFIVT QFWVAAVALVLCLAILAGGMTAPLLLALTFANGIGLAMRWPVFAAIVPELVARAQLPAALALNGVAMNASRIMGPLLAGA IIASAGSAWVFVLNAVLSVLSGLVIMRWKRVHVPNPLGRERLPSAMRVGLQFVGQSPRMRAVMWRISIFFLHATALLALL PLLARGLEGGGAGTFTLLLASMGAGAISAALFLPRLRQAMAGDTLVIRGTLLQAAATGVMAIAPNVQVAVPAMFIGGMAW ITTANSLSVSAQLALPNWVRARGMSIYQMAIMGSTALGAALWGQVATLGNVHLSLGLSALSGVLAMLLVQRLVADRSIEE DLSPSRAFKAPVLDIPPESGHVVVTIEYFIDPARAAEFRALMQDSRRSRLRQGALAWQLQHDITDPARYVEQIEDESWTE HLRRFDRVTAHDVALRERKLAFHTRDTPPVVSRLLVQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55855; Mature: 55724
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALAPLTIPVFRMLWLTWVTANTCMWMNDVAAAWLMTTLTSSPILVALVQSASTLPVFL CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEE LGLPSGALADILDRRRYFIVTQFWVAAVALVLCLAILAGGMTAPLLLALTFANGIGLAMR EECCCCHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH WPVFAAIVPELVARAQLPAALALNGVAMNASRIMGPLLAGAIIASAGSAWVFVLNAVLSV HHHHHHHHHHHHHHHCCCHHHHHCCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LSGLVIMRWKRVHVPNPLGRERLPSAMRVGLQFVGQSPRMRAVMWRISIFFLHATALLAL HHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LPLLARGLEGGGAGTFTLLLASMGAGAISAALFLPRLRQAMAGDTLVIRGTLLQAAATGV HHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCC MAIAPNVQVAVPAMFIGGMAWITTANSLSVSAQLALPNWVRARGMSIYQMAIMGSTALGA EEECCCCEEEHHHHHHCCHHHEEECCCCEEEEEECCCHHHHHCCCHHHHHHHHCCHHHHH ALWGQVATLGNVHLSLGLSALSGVLAMLLVQRLVADRSIEEDLSPSRAFKAPVLDIPPES HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHCCCCCEECCCCC GHVVVTIEYFIDPARAAEFRALMQDSRRSRLRQGALAWQLQHDITDPARYVEQIEDESWT CCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCHHHHHHHHCCCHHH EHLRRFDRVTAHDVALRERKLAFHTRDTPPVVSRLLVQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure TALAPLTIPVFRMLWLTWVTANTCMWMNDVAAAWLMTTLTSSPILVALVQSASTLPVFL CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEE LGLPSGALADILDRRRYFIVTQFWVAAVALVLCLAILAGGMTAPLLLALTFANGIGLAMR EECCCCHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHH WPVFAAIVPELVARAQLPAALALNGVAMNASRIMGPLLAGAIIASAGSAWVFVLNAVLSV HHHHHHHHHHHHHHHCCCHHHHHCCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LSGLVIMRWKRVHVPNPLGRERLPSAMRVGLQFVGQSPRMRAVMWRISIFFLHATALLAL HHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LPLLARGLEGGGAGTFTLLLASMGAGAISAALFLPRLRQAMAGDTLVIRGTLLQAAATGV HHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCC MAIAPNVQVAVPAMFIGGMAWITTANSLSVSAQLALPNWVRARGMSIYQMAIMGSTALGA EEECCCCEEEHHHHHHCCHHHEEECCCCEEEEEECCCHHHHHCCCHHHHHHHHCCHHHHH ALWGQVATLGNVHLSLGLSALSGVLAMLLVQRLVADRSIEEDLSPSRAFKAPVLDIPPES HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHCCCCCEECCCCC GHVVVTIEYFIDPARAAEFRALMQDSRRSRLRQGALAWQLQHDITDPARYVEQIEDESWT CCEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCHHHHHHHHCCCHHH EHLRRFDRVTAHDVALRERKLAFHTRDTPPVVSRLLVQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA