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The map label for this gene is smf [H]

Identifier: 121611000

GI number: 121611000

Start: 4476899

End: 4478098

Strand: Direct

Name: smf [H]

Synonym: Veis_4084

Alternate gene names: 121611000

Gene position: 4476899-4478098 (Clockwise)

Preceding gene: 121610999

Following gene: 121611008

Centisome position: 80.42

GC content: 71.5

Gene sequence:

>1200_bases
ATGGACCGTGAAGAGCTTGCGGCCTGGTTGCGTCTGACCGTCACTGCCGGGGTCGGCAACGGCGCGGCACGGCGCCTGCT
GGCCTGCTTCGGCATGCCGCAGGCGATTTTTGCGCAGTCTGCGGCGGCGTTGCAGCAATGCGTGTCGGACGCGCAGGCGC
GGGCCTTGTGCGCCGTCCCGCCGACCTGGCAGGCGCTGCTGGAAAAGACCGAGCGGTGGCTGTCCGGCGCCGATCCGCAA
GGGCCGGCGCATGCCATCGTCACCTTGGGCGACAGCCGCTACCCGCAGACGCTGCTGGAAACGCCTGACCCGCCGCTGTT
GCTCTACCTGATGGGGCCGGCGCATTTGCTCGCGCAGCAGGCTTTTCCCGCTGGCCCCTGCCTGGCCGTGGTGGGCAGCC
GCAACCCCAGTGCCCAGGGCGCAGAGAACGCGCGCCAGTTTGCCCGGGCCTTGCATGGCGCAGGGCTGGGCATCGTCTCC
GGCTTGGCGCTGGGGATCGATGCGGCCGCCCATGAAGGCGCGCTGGATGCGGCGCTGACCGGCGCCGGGGTGGCCGCCAC
GCTGGCCGTGGTCGGCACCGGGCTGGACCAGGTCTATCCGCGCAAGAACATCGATCTGGCGCGCCGCATCGCAGCCTCCG
GGCTGCTGATCAGCGAATACCCGCTCGGCACGCCGCCGCTGGCGGCCCATTTTCCCAAGCGCAACCGCATCATCGCCGGC
CTGTCGCAGGGTTGCCTGGTGGTGGAGGCCGCGCTGGCCTCGGGTTCATTGATCACGGCCAGGCTGTCGGCCGAGCAGGG
GCGCGAGGTGTTTGCGATTCCAGGCTCGATCCATGCACCCCAGTCGCGTGGCTGCCATGCGCTGATACGCCAGGGCGCGA
AGCTGGTCGAGTCGGCGCAGGATGTGTTGCAGGAACTGGTGATTCCGGCCCGCAGGGCGGCGGCGCCCGGGGCCGGGGCC
GGGGCCGGGGCCGATGCCGATACGCCGCCCACCGCAGGGGCCGATGCGCCTGCCGCAGGGTCCGCGATGGACACGCCGTT
GCTGGCGGCCCTGGGGTTCGATCCGATCGGCATCGATGCGCTGCTGGCACGCACCGGCATGGCTACCGCCGCGCTGCAGG
TGGCGTTGCTGGAGCTGGAGTTGGCCGGCAGCGTGGCGCGCTTGCCGGGGGGCTTGTTTCAGCGCTTGGCCCGGGGCTGA

Upstream 100 bases:

>100_bases
GTGGGTGACCGCCTGGTCAACCCCCGGTAGTTCGCGTGGTCGCAAGGGCCGCCCGCGCCGTGCAGGCAGCAGCCAGTAGC
GCTGGAACCCGGTAGACGGC

Downstream 100 bases:

>100_bases
GAATCTTCAGTTTCAGTTCAAGAGCCGCTCGGGGTTGGCGCCGAGCTTGGCCAGCGCATCGCGCGTTGCGCGCACCGTCA
GGCCCTCGTTGTCCTGGGCC

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MDREELAAWLRLTVTAGVGNGAARRLLACFGMPQAIFAQSAAALQQCVSDAQARALCAVPPTWQALLEKTERWLSGADPQ
GPAHAIVTLGDSRYPQTLLETPDPPLLLYLMGPAHLLAQQAFPAGPCLAVVGSRNPSAQGAENARQFARALHGAGLGIVS
GLALGIDAAAHEGALDAALTGAGVAATLAVVGTGLDQVYPRKNIDLARRIAASGLLISEYPLGTPPLAAHFPKRNRIIAG
LSQGCLVVEAALASGSLITARLSAEQGREVFAIPGSIHAPQSRGCHALIRQGAKLVESAQDVLQELVIPARRAAAPGAGA
GAGADADTPPTAGADAPAAGSAMDTPLLAALGFDPIGIDALLARTGMATAALQVALLELELAGSVARLPGGLFQRLARG

Sequences:

>Translated_399_residues
MDREELAAWLRLTVTAGVGNGAARRLLACFGMPQAIFAQSAAALQQCVSDAQARALCAVPPTWQALLEKTERWLSGADPQ
GPAHAIVTLGDSRYPQTLLETPDPPLLLYLMGPAHLLAQQAFPAGPCLAVVGSRNPSAQGAENARQFARALHGAGLGIVS
GLALGIDAAAHEGALDAALTGAGVAATLAVVGTGLDQVYPRKNIDLARRIAASGLLISEYPLGTPPLAAHFPKRNRIIAG
LSQGCLVVEAALASGSLITARLSAEQGREVFAIPGSIHAPQSRGCHALIRQGAKLVESAQDVLQELVIPARRAAAPGAGA
GAGADADTPPTAGADAPAAGSAMDTPLLAALGFDPIGIDALLARTGMATAALQVALLELELAGSVARLPGGLFQRLARG
>Mature_399_residues
MDREELAAWLRLTVTAGVGNGAARRLLACFGMPQAIFAQSAAALQQCVSDAQARALCAVPPTWQALLEKTERWLSGADPQ
GPAHAIVTLGDSRYPQTLLETPDPPLLLYLMGPAHLLAQQAFPAGPCLAVVGSRNPSAQGAENARQFARALHGAGLGIVS
GLALGIDAAAHEGALDAALTGAGVAATLAVVGTGLDQVYPRKNIDLARRIAASGLLISEYPLGTPPLAAHFPKRNRIIAG
LSQGCLVVEAALASGSLITARLSAEQGREVFAIPGSIHAPQSRGCHALIRQGAKLVESAQDVLQELVIPARRAAAPGAGA
GAGADADTPPTAGADAPAAGSAMDTPLLAALGFDPIGIDALLARTGMATAALQVALLELELAGSVARLPGGLFQRLARG

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=394, Percent_Identity=38.5786802030457, Blast_Score=201, Evalue=8e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40474; Mature: 40474

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDREELAAWLRLTVTAGVGNGAARRLLACFGMPQAIFAQSAAALQQCVSDAQARALCAVP
CCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEECCC
PTWQALLEKTERWLSGADPQGPAHAIVTLGDSRYPQTLLETPDPPLLLYLMGPAHLLAQQ
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCHHHHHHHH
AFPAGPCLAVVGSRNPSAQGAENARQFARALHGAGLGIVSGLALGIDAAAHEGALDAALT
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH
GAGVAATLAVVGTGLDQVYPRKNIDLARRIAASGLLISEYPLGTPPLAAHFPKRNRIIAG
CCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCEEEC
LSQGCLVVEAALASGSLITARLSAEQGREVFAIPGSIHAPQSRGCHALIRQGAKLVESAQ
CCCCHHHHHHHHHCCCEEEEEECHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
DVLQELVIPARRAAAPGAGAGAGADADTPPTAGADAPAAGSAMDTPLLAALGFDPIGIDA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHH
LLARTGMATAALQVALLELELAGSVARLPGGLFQRLARG
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCC
>Mature Secondary Structure
MDREELAAWLRLTVTAGVGNGAARRLLACFGMPQAIFAQSAAALQQCVSDAQARALCAVP
CCHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEECCC
PTWQALLEKTERWLSGADPQGPAHAIVTLGDSRYPQTLLETPDPPLLLYLMGPAHLLAQQ
HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEEECCHHHHHHHH
AFPAGPCLAVVGSRNPSAQGAENARQFARALHGAGLGIVSGLALGIDAAAHEGALDAALT
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH
GAGVAATLAVVGTGLDQVYPRKNIDLARRIAASGLLISEYPLGTPPLAAHFPKRNRIIAG
CCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCEEEC
LSQGCLVVEAALASGSLITARLSAEQGREVFAIPGSIHAPQSRGCHALIRQGAKLVESAQ
CCCCHHHHHHHHHCCCEEEEEECHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
DVLQELVIPARRAAAPGAGAGAGADADTPPTAGADAPAAGSAMDTPLLAALGFDPIGIDA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHH
LLARTGMATAALQVALLELELAGSVARLPGGLFQRLARG
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]