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The map label for this gene is 121610999

Identifier: 121610999

GI number: 121610999

Start: 4475566

End: 4476828

Strand: Direct

Name: 121610999

Synonym: Veis_4083

Alternate gene names: NA

Gene position: 4475566-4476828 (Clockwise)

Preceding gene: 121610993

Following gene: 121611000

Centisome position: 80.4

GC content: 66.9

Gene sequence:

>1263_bases
ATGCAGCAAACAAGGAATCACATGACGGCATTCACCAGCGCGCGACGGACCGGCTGGGGCACGCTCTTGGCGGGCGCCAT
GCTGGTCGCGGCGGCGCAGGCGCAAGATCAACCCTCGCCTGCCGGCAGCGTGCCGGCAGCACAGCCACACACCACGGCGC
AGCAGCGCGCGACGGCGCAGCAAGTGGCCGAACACGGCGTGCCGCTGCAAGAACTGGCGCCCGGCGCGCCAGACAGCTAC
AGCGTCAAGCGCGGCGATACGCTGTGGGGCATTGCCGGTCTGTTCCTCAAGCACCCATGGTATTGGCCGCAGTTGTGGGG
CATGAACCGCGAGACCATCCACAACCCGCACCTGATCTTTCCGGGCCAGACGCTGTACCTGGAAAAGGATGGCGCTTACG
CCCGCCTGCGCAGCAGCCGCTCCGCTGCCGCCGAGCCCGACACCGTTCGGGTCTCGCCGCGCACGCGCAGTGACAGCCTG
GCCGATGTGGCGCTGCCCACGCTCAATCCCGATCTGGTCGAGCCTTTTTTGGCCGAACCGCTGGTGGTCGACCCGCAGGT
CTTGCTGCAAGCGCCACGGGTGGTGGCGATGACCGATGACCGGATGCTGATGGCCAGTGGCGACCGTGTCTACGCCCGTG
GCAGCGCCAAGTCGCCGTTGCTTGCCGGCAGCACGAGCGCGTCGCGCCGCTACCGCGTGTTCCGCGACGCGACTGCGCTC
AAAGACCCCGGCACCGGCGAGGTGCTGGCCTACGAAGCCCAGTACCTGGGCCAGGCGGAACTGGTGCGCGGCGAGTCGAT
GGAGGATGTCCCGGACGGCAAGGGCGGCCATACCAGCAAGCATGTGCCCGCGACGATCGATTTGTCGGCCACCAAAGGCG
AGATACAGGCCGGCGATCGCCTGCTGCCGGCGCCGGCCCGGGTTTTTTCGGGCTATGTCCCGCGCGCCCCGAAGTCCGAT
GTGGATGCCCGTGTGGTGGCGCTCTACGGCAATGCGGCGGTGGAATTCGCGGCGCAAAACCAGGTGGTATCGATCAACAA
GGGCGCGCAGGACGGCATCGAGCCGGGCTATGTGCTGAGCTTGGTCAACAAGGGCGCGAGCATCGCGGATGGCACCGAAG
AAGGCAAGCCGGCGATCAAGCTGCCCAATGAGATCAATGGCACGGCCATGGTGTTTCGCACCTTCGATCGGGTGTCCTAT
GCGCTGATCCTGGAAATCCGCAACGCCGTGCGCGTGGGTGACCGCCTGGTCAACCCCCGGTAG

Upstream 100 bases:

>100_bases
CTTGGGCAGAGAATCTCGAATGGTTTTCAACGTTGGGCCAGGCCCGGTCGCGCAGCTTTTCTGCGCTGTGCAGCCCCGAT
GAGGGGGGGACGTTTCATTC

Downstream 100 bases:

>100_bases
TTCGCGTGGTCGCAAGGGCCGCCCGCGCCGTGCAGGCAGCAGCCAGTAGCGCTGGAACCCGGTAGACGGCATGGACCGTG
AAGAGCTTGCGGCCTGGTTG

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MQQTRNHMTAFTSARRTGWGTLLAGAMLVAAAQAQDQPSPAGSVPAAQPHTTAQQRATAQQVAEHGVPLQELAPGAPDSY
SVKRGDTLWGIAGLFLKHPWYWPQLWGMNRETIHNPHLIFPGQTLYLEKDGAYARLRSSRSAAAEPDTVRVSPRTRSDSL
ADVALPTLNPDLVEPFLAEPLVVDPQVLLQAPRVVAMTDDRMLMASGDRVYARGSAKSPLLAGSTSASRRYRVFRDATAL
KDPGTGEVLAYEAQYLGQAELVRGESMEDVPDGKGGHTSKHVPATIDLSATKGEIQAGDRLLPAPARVFSGYVPRAPKSD
VDARVVALYGNAAVEFAAQNQVVSINKGAQDGIEPGYVLSLVNKGASIADGTEEGKPAIKLPNEINGTAMVFRTFDRVSY
ALILEIRNAVRVGDRLVNPR

Sequences:

>Translated_420_residues
MQQTRNHMTAFTSARRTGWGTLLAGAMLVAAAQAQDQPSPAGSVPAAQPHTTAQQRATAQQVAEHGVPLQELAPGAPDSY
SVKRGDTLWGIAGLFLKHPWYWPQLWGMNRETIHNPHLIFPGQTLYLEKDGAYARLRSSRSAAAEPDTVRVSPRTRSDSL
ADVALPTLNPDLVEPFLAEPLVVDPQVLLQAPRVVAMTDDRMLMASGDRVYARGSAKSPLLAGSTSASRRYRVFRDATAL
KDPGTGEVLAYEAQYLGQAELVRGESMEDVPDGKGGHTSKHVPATIDLSATKGEIQAGDRLLPAPARVFSGYVPRAPKSD
VDARVVALYGNAAVEFAAQNQVVSINKGAQDGIEPGYVLSLVNKGASIADGTEEGKPAIKLPNEINGTAMVFRTFDRVSY
ALILEIRNAVRVGDRLVNPR
>Mature_420_residues
MQQTRNHMTAFTSARRTGWGTLLAGAMLVAAAQAQDQPSPAGSVPAAQPHTTAQQRATAQQVAEHGVPLQELAPGAPDSY
SVKRGDTLWGIAGLFLKHPWYWPQLWGMNRETIHNPHLIFPGQTLYLEKDGAYARLRSSRSAAAEPDTVRVSPRTRSDSL
ADVALPTLNPDLVEPFLAEPLVVDPQVLLQAPRVVAMTDDRMLMASGDRVYARGSAKSPLLAGSTSASRRYRVFRDATAL
KDPGTGEVLAYEAQYLGQAELVRGESMEDVPDGKGGHTSKHVPATIDLSATKGEIQAGDRLLPAPARVFSGYVPRAPKSD
VDARVVALYGNAAVEFAAQNQVVSINKGAQDGIEPGYVLSLVNKGASIADGTEEGKPAIKLPNEINGTAMVFRTFDRVSY
ALILEIRNAVRVGDRLVNPR

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45114; Mature: 45114

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTRNHMTAFTSARRTGWGTLLAGAMLVAAAQAQDQPSPAGSVPAAQPHTTAQQRATAQ
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
QVAEHGVPLQELAPGAPDSYSVKRGDTLWGIAGLFLKHPWYWPQLWGMNRETIHNPHLIF
HHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHCCCCEEEE
PGQTLYLEKDGAYARLRSSRSAAAEPDTVRVSPRTRSDSLADVALPTLNPDLVEPFLAEP
CCCEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCCCCHHHEECCCCCHHHHHHHHCCC
LVVDPQVLLQAPRVVAMTDDRMLMASGDRVYARGSAKSPLLAGSTSASRRYRVFRDATAL
EEECHHHHHCCCCEEEEECCEEEEECCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHC
KDPGTGEVLAYEAQYLGQAELVRGESMEDVPDGKGGHTSKHVPATIDLSATKGEIQAGDR
CCCCCCCEEEEEHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCE
LLPAPARVFSGYVPRAPKSDVDARVVALYGNAAVEFAAQNQVVSINKGAQDGIEPGYVLS
ECCCHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCEEH
LVNKGASIADGTEEGKPAIKLPNEINGTAMVFRTFDRVSYALILEIRNAVRVGDRLVNPR
HHHCCCCCCCCCCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQQTRNHMTAFTSARRTGWGTLLAGAMLVAAAQAQDQPSPAGSVPAAQPHTTAQQRATAQ
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
QVAEHGVPLQELAPGAPDSYSVKRGDTLWGIAGLFLKHPWYWPQLWGMNRETIHNPHLIF
HHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHCCCCEEEE
PGQTLYLEKDGAYARLRSSRSAAAEPDTVRVSPRTRSDSLADVALPTLNPDLVEPFLAEP
CCCEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCCCCCHHHEECCCCCHHHHHHHHCCC
LVVDPQVLLQAPRVVAMTDDRMLMASGDRVYARGSAKSPLLAGSTSASRRYRVFRDATAL
EEECHHHHHCCCCEEEEECCEEEEECCCEEEECCCCCCCEEECCCCCHHHHHHHHHHHHC
KDPGTGEVLAYEAQYLGQAELVRGESMEDVPDGKGGHTSKHVPATIDLSATKGEIQAGDR
CCCCCCCEEEEEHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCE
LLPAPARVFSGYVPRAPKSDVDARVVALYGNAAVEFAAQNQVVSINKGAQDGIEPGYVLS
ECCCHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCEEH
LVNKGASIADGTEEGKPAIKLPNEINGTAMVFRTFDRVSYALILEIRNAVRVGDRLVNPR
HHHCCCCCCCCCCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA