| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610972
Identifier: 121610972
GI number: 121610972
Start: 4448911
End: 4449714
Strand: Direct
Name: 121610972
Synonym: Veis_4056
Alternate gene names: NA
Gene position: 4448911-4449714 (Clockwise)
Preceding gene: 121610971
Following gene: 121610973
Centisome position: 79.92
GC content: 74.13
Gene sequence:
>804_bases ATGAACCACCCGATGAGCCACCCGATGAATCACCCCATGCGCCACCCCGTCACCGTGCTGGTGGCCCCGCGCAGCCACCC CGTCAGCCAGCGCCCGACCCGCTGCCCGGCCGATGCCCGGGCGGTCACGCTGGCCTTGGGCCTGTCGCTGCCGGTGCGCC TGCTGACTGCGGGGGCCATGCCCGAGCAGGTCGCCCGCGACTACCTGGCCTTGGGTGCGGGCCAGATCGACATCCTGCCC TGCGCCGACGATTCGCTGCTGCTGCCCGCCTTGCTGCCCGCGCTGCGCGCGGCGGACTGGGTGCTGACCGGCACCCGCTC GGCCGTCGATCACGGCAGCGGCGTCTTGCCCCATGCGCTGGCCGCCGCGCTGCAACGGCCGCTGGTGACCGAGGTGTTGG CGCTCCAGATCGAAGGCGCGTCCGGCATCGTCACCCAGGCCCTGCCCCGGGGCGCGCGGCGCCGTTTGCGCGTGCAGGCC CCGGCCCTGCTGGCCGTCAGCGCAGCCGCAGCGCCGGCCTTGCGCCATTCGCTGGCCGACGCCATGGCCGGCCGAATCCG GCATGGCGCTGGCGCTGGCGACACCGCCCCGGCGCCACTGGGCCCGCCCTGCGGCCAGCGCGTTCCGGCAAACCAGCGGC GCCAGGTGCTGCAGGCCACGATCGTGCAAAGCGGCCACGCCCGGATGCTGGGGGCCATCGCCCCGGCAACCACCGGCGGC ACCATCGTCCGCGACGGCACTGCCCATACCAAGGCGCAGGCAGTGCTCGATTACCTGCGCCGCCACTCACTTGTGTCCTT CTGA
Upstream 100 bases:
>100_bases CGATCACCGGCCGCGCCCATCTGAGCGTGATCGAAGACAGCGCGGCGCTGATGCAAGCGCTGATCGAACTGGTGCGCAAG GAAAGGGACAAGGCCGGCGC
Downstream 100 bases:
>100_bases AAGGACCGAAAGGACCTTCGCCATGACGAGCCCATGCCAATCCCTGTCAGCCCCCGGAGAACTGGTGCGCGAACTGCTGG CCCGGCGCCGCCCCGGTTAC
Product: electron transfer flavoprotein subunit beta
Products: NA
Alternate protein names: Electron Transfer Flavoprotein Subunit Beta; Electron Transfer Flavoprotein Beta-Subunit; Electron Transfer Flavoprotein Beta- Subunit; Electron Transfer Flavoprotein Beta Subunit
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNHPMSHPMNHPMRHPVTVLVAPRSHPVSQRPTRCPADARAVTLALGLSLPVRLLTAGAMPEQVARDYLALGAGQIDILP CADDSLLLPALLPALRAADWVLTGTRSAVDHGSGVLPHALAAALQRPLVTEVLALQIEGASGIVTQALPRGARRRLRVQA PALLAVSAAAAPALRHSLADAMAGRIRHGAGAGDTAPAPLGPPCGQRVPANQRRQVLQATIVQSGHARMLGAIAPATTGG TIVRDGTAHTKAQAVLDYLRRHSLVSF
Sequences:
>Translated_267_residues MNHPMSHPMNHPMRHPVTVLVAPRSHPVSQRPTRCPADARAVTLALGLSLPVRLLTAGAMPEQVARDYLALGAGQIDILP CADDSLLLPALLPALRAADWVLTGTRSAVDHGSGVLPHALAAALQRPLVTEVLALQIEGASGIVTQALPRGARRRLRVQA PALLAVSAAAAPALRHSLADAMAGRIRHGAGAGDTAPAPLGPPCGQRVPANQRRQVLQATIVQSGHARMLGAIAPATTGG TIVRDGTAHTKAQAVLDYLRRHSLVSF >Mature_267_residues MNHPMSHPMNHPMRHPVTVLVAPRSHPVSQRPTRCPADARAVTLALGLSLPVRLLTAGAMPEQVARDYLALGAGQIDILP CADDSLLLPALLPALRAADWVLTGTRSAVDHGSGVLPHALAAALQRPLVTEVLALQIEGASGIVTQALPRGARRRLRVQA PALLAVSAAAAPALRHSLADAMAGRIRHGAGAGDTAPAPLGPPCGQRVPANQRRQVLQATIVQSGHARMLGAIAPATTGG TIVRDGTAHTKAQAVLDYLRRHSLVSF
Specific function: Unknown
COG id: COG2086
COG function: function code C; Electron transfer flavoprotein, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27783; Mature: 27783
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHPMSHPMNHPMRHPVTVLVAPRSHPVSQRPTRCPADARAVTLALGLSLPVRLLTAGAM CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCC PEQVARDYLALGAGQIDILPCADDSLLLPALLPALRAADWVLTGTRSAVDHGSGVLPHAL HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEECCHHHHHCCCCCHHHHH AAALQRPLVTEVLALQIEGASGIVTQALPRGARRRLRVQAPALLAVSAAAAPALRHSLAD HHHHHCHHHHHHHHHEECCCCCHHHHHHCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH AMAGRIRHGAGAGDTAPAPLGPPCGQRVPANQRRQVLQATIVQSGHARMLGAIAPATTGG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC TIVRDGTAHTKAQAVLDYLRRHSLVSF EEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNHPMSHPMNHPMRHPVTVLVAPRSHPVSQRPTRCPADARAVTLALGLSLPVRLLTAGAM CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCC PEQVARDYLALGAGQIDILPCADDSLLLPALLPALRAADWVLTGTRSAVDHGSGVLPHAL HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEECCHHHHHCCCCCHHHHH AAALQRPLVTEVLALQIEGASGIVTQALPRGARRRLRVQAPALLAVSAAAAPALRHSLAD HHHHHCHHHHHHHHHEECCCCCHHHHHHCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH AMAGRIRHGAGAGDTAPAPLGPPCGQRVPANQRRQVLQATIVQSGHARMLGAIAPATTGG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC TIVRDGTAHTKAQAVLDYLRRHSLVSF EEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA