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The map label for this gene is fadF [H]

Identifier: 121610970

GI number: 121610970

Start: 4445631

End: 4447529

Strand: Direct

Name: fadF [H]

Synonym: Veis_4054

Alternate gene names: 121610970

Gene position: 4445631-4447529 (Clockwise)

Preceding gene: 121610969

Following gene: 121610971

Centisome position: 79.86

GC content: 72.14

Gene sequence:

>1899_bases
ATGCTGCCGCAACTGGTGCGCATCCTGTTCTGGCTGGCGCTGCTGACCTTGGCCTGGGGCCTGGCGCGGCGCGCGCTGCT
CTGGCGCACGGGGCGCGGCGCCGATGTCGATCTGCGCGGCTTGCTGCAAATTCCAAAACGCTATCTGGTCGACCTGCACG
ACGTGGTGGCGCGCGAGCCGCTGGTCGCGCGGGCCCATGTCGGCGCCGCCGGCGGCGCCGTGCTGGCCTTGGCGCTGGTG
GCGTTGAACTACGGCCTGGGCCTGTACTGGCGCAGCCTGGACGCGCTGCTGCTGCTGGCCGGCCTGGTGCTGCTGGCCGG
CGCCGCCACCATGGCCTGGCGCCGGCGCAACCCGCCCGCGCGCCTGTCCCGGGGCGCATGGCAGCGCCTGCCCCACAGCC
TGCTGCTGTTCGCGCTGGCCGTGGCGCTGACCGGCGCCGTGGCCTGCACCGGCACCGCGCTGGCCCCCTGGCTGGCCGCG
CTGATCAGCCTGGCGTTTGCCGCCGGCGCCGCCGAACTGGCGCTGGGCATCGGCCTCGGCGGACCGATGAAACATGCCGT
GGCCGGTCTGCTGCACCTGGGCCTGCACCCCCGGCCCGAGCGCTTTGGCGAGCGGCGCTTTGCCACGGCCCTGCGGCCCC
TGCGCCTGAATGCCGACGACCTGCGCGCCGACGATCTGGGGGTGGGCAAACCGGCCGATTTCGCCTGGAACCGGCTGCTG
TCCTTCGATGCCTGCGTGCAATGCGGCAAATGCGAAGCCGCTTGCCCGGCCTTCGCCGCAGGCCAGCCGTTGAACCCGAA
GAAATTGGTGCAGGACCTGGTCGCCGGCCTGAGCGCCGGCAGCGACGCCGGCTACGCCGGCAGCCCCCACCCCGGCCGGC
CGATCGGCGCGCACCAGGGGGCACCCGGGCAGCCCATCGTGCCGGGCCTGATCGACAGCGACACGCTGTGGTCCTGCACC
ACCTGCCGCGCCTGCGTGCAGGAATGCCCGATGCTGATCGAGCATGTGGACGCGATCGTGGACATGCGCCGCCATCTGAC
GCTGGTCACGGGCCTGGTGCCGAACCAGGGCCGGCAGGCGCTGGAACAACTGCGCGACACCGATACCGTGGGCGGCTTCC
CGCTGGCTGCGCGCCACCACTGGGCCGTCGACCTGAATGTGCCGGTGCTGGCGCCCGGCGCGCAGACCGACTGGCTGGTG
CTGGTCGGCGAAGGCGGCTTTGACATGCGCTACCAGCGCAGCCTGCGGGCGCTGGTCAAGACGCTGCAAAAAGCCGGGCT
GGACATCGCGCTGCTGGGCGCGGCCGAGACCGATGGCGGCGATCTGGCGCGGCGCCTGGGCGACGAGGCCGGCTTTCAGC
GCCTGGCCGCGCAACTCATCGCCACCCTCGGTGCGCGCCGGTTTGCGCATATCGTGACCCCCGACCCGCATCTGTTTCAT
CTGCTGAAGAACGAATACCCGGCGCTGGGCGCAGATTTCGATGTCTGGCACCACAGCCAACTGCTGGCCGATCTGCTGGC
CCGGGGCCGGTTGCAGCCCACGCGCGCCGCCAGCCACGAGGCCGTGACCTACCACGACCCCTGTTACCTGGGCCGCTACG
GCGGCGAAGTGCAGGCCCCGCGCGCGCTGCTCCAGGGCATTGGCATCGAGGTGCGCGAGATGCAACGCAACCGCGCGCAG
GGCCGCTGCTGCGGCGGCGGCGGCGGCGCGCCGTTCACCGACATCCCCGGCAGCACCCGCATCCCGGACATCCGCATCGC
GGACGCAAAAAGCACAGGCGCCGGCGTGGTGGCCGTCGCCTGCCCGAACTGCACGACCATGCTCGAAGGCGTGGTCGGCC
CGCGCCCGCAGGTGCTGGACATCGCCGAACTGCTGGCGCAGGCACTGGAATTGGCATGA

Upstream 100 bases:

>100_bases
GACGGCCAGTTCCTGCTCTACCGCATCGGCGACTGCGTCTCGATGCACGACATCCACGGCGCCATCTACGACGCGCTGCG
GCTGTGCAAGGATTTTTGAA

Downstream 100 bases:

>100_bases
GCACCGCCCGGCCGCCCGAAGGTGCTCATACCGCAGCCGAAGGCGAAGGCACTCCAGTGACCACCGCCCGGCCGCCCGAA
AGCGCTCATACCGCAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MLPQLVRILFWLALLTLAWGLARRALLWRTGRGADVDLRGLLQIPKRYLVDLHDVVAREPLVARAHVGAAGGAVLALALV
ALNYGLGLYWRSLDALLLLAGLVLLAGAATMAWRRRNPPARLSRGAWQRLPHSLLLFALAVALTGAVACTGTALAPWLAA
LISLAFAAGAAELALGIGLGGPMKHAVAGLLHLGLHPRPERFGERRFATALRPLRLNADDLRADDLGVGKPADFAWNRLL
SFDACVQCGKCEAACPAFAAGQPLNPKKLVQDLVAGLSAGSDAGYAGSPHPGRPIGAHQGAPGQPIVPGLIDSDTLWSCT
TCRACVQECPMLIEHVDAIVDMRRHLTLVTGLVPNQGRQALEQLRDTDTVGGFPLAARHHWAVDLNVPVLAPGAQTDWLV
LVGEGGFDMRYQRSLRALVKTLQKAGLDIALLGAAETDGGDLARRLGDEAGFQRLAAQLIATLGARRFAHIVTPDPHLFH
LLKNEYPALGADFDVWHHSQLLADLLARGRLQPTRAASHEAVTYHDPCYLGRYGGEVQAPRALLQGIGIEVREMQRNRAQ
GRCCGGGGGAPFTDIPGSTRIPDIRIADAKSTGAGVVAVACPNCTTMLEGVVGPRPQVLDIAELLAQALELA

Sequences:

>Translated_632_residues
MLPQLVRILFWLALLTLAWGLARRALLWRTGRGADVDLRGLLQIPKRYLVDLHDVVAREPLVARAHVGAAGGAVLALALV
ALNYGLGLYWRSLDALLLLAGLVLLAGAATMAWRRRNPPARLSRGAWQRLPHSLLLFALAVALTGAVACTGTALAPWLAA
LISLAFAAGAAELALGIGLGGPMKHAVAGLLHLGLHPRPERFGERRFATALRPLRLNADDLRADDLGVGKPADFAWNRLL
SFDACVQCGKCEAACPAFAAGQPLNPKKLVQDLVAGLSAGSDAGYAGSPHPGRPIGAHQGAPGQPIVPGLIDSDTLWSCT
TCRACVQECPMLIEHVDAIVDMRRHLTLVTGLVPNQGRQALEQLRDTDTVGGFPLAARHHWAVDLNVPVLAPGAQTDWLV
LVGEGGFDMRYQRSLRALVKTLQKAGLDIALLGAAETDGGDLARRLGDEAGFQRLAAQLIATLGARRFAHIVTPDPHLFH
LLKNEYPALGADFDVWHHSQLLADLLARGRLQPTRAASHEAVTYHDPCYLGRYGGEVQAPRALLQGIGIEVREMQRNRAQ
GRCCGGGGGAPFTDIPGSTRIPDIRIADAKSTGAGVVAVACPNCTTMLEGVVGPRPQVLDIAELLAQALELA
>Mature_632_residues
MLPQLVRILFWLALLTLAWGLARRALLWRTGRGADVDLRGLLQIPKRYLVDLHDVVAREPLVARAHVGAAGGAVLALALV
ALNYGLGLYWRSLDALLLLAGLVLLAGAATMAWRRRNPPARLSRGAWQRLPHSLLLFALAVALTGAVACTGTALAPWLAA
LISLAFAAGAAELALGIGLGGPMKHAVAGLLHLGLHPRPERFGERRFATALRPLRLNADDLRADDLGVGKPADFAWNRLL
SFDACVQCGKCEAACPAFAAGQPLNPKKLVQDLVAGLSAGSDAGYAGSPHPGRPIGAHQGAPGQPIVPGLIDSDTLWSCT
TCRACVQECPMLIEHVDAIVDMRRHLTLVTGLVPNQGRQALEQLRDTDTVGGFPLAARHHWAVDLNVPVLAPGAQTDWLV
LVGEGGFDMRYQRSLRALVKTLQKAGLDIALLGAAETDGGDLARRLGDEAGFQRLAAQLIATLGARRFAHIVTPDPHLFH
LLKNEYPALGADFDVWHHSQLLADLLARGRLQPTRAASHEAVTYHDPCYLGRYGGEVQAPRALLQGIGIEVREMQRNRAQ
GRCCGGGGGAPFTDIPGSTRIPDIRIADAKSTGAGVVAVACPNCTTMLEGVVGPRPQVLDIAELLAQALELA

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 67145; Mature: 67145

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPQLVRILFWLALLTLAWGLARRALLWRTGRGADVDLRGLLQIPKRYLVDLHDVVAREP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
LVARAHVGAAGGAVLALALVALNYGLGLYWRSLDALLLLAGLVLLAGAATMAWRRRNPPA
HHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLSRGAWQRLPHSLLLFALAVALTGAVACTGTALAPWLAALISLAFAAGAAELALGIGLG
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
GPMKHAVAGLLHLGLHPRPERFGERRFATALRPLRLNADDLRADDLGVGKPADFAWNRLL
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHH
SFDACVQCGKCEAACPAFAAGQPLNPKKLVQDLVAGLSAGSDAGYAGSPHPGRPIGAHQG
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
APGQPIVPGLIDSDTLWSCTTCRACVQECPMLIEHVDAIVDMRRHLTLVTGLVPNQGRQA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LEQLRDTDTVGGFPLAARHHWAVDLNVPVLAPGAQTDWLVLVGEGGFDMRYQRSLRALVK
HHHHHCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHH
TLQKAGLDIALLGAAETDGGDLARRLGDEAGFQRLAAQLIATLGARRFAHIVTPDPHLFH
HHHHCCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHH
LLKNEYPALGADFDVWHHSQLLADLLARGRLQPTRAASHEAVTYHDPCYLGRYGGEVQAP
HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEECCCCCCCHHH
RALLQGIGIEVREMQRNRAQGRCCGGGGGAPFTDIPGSTRIPDIRIADAKSTGAGVVAVA
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEE
CPNCTTMLEGVVGPRPQVLDIAELLAQALELA
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPQLVRILFWLALLTLAWGLARRALLWRTGRGADVDLRGLLQIPKRYLVDLHDVVAREP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
LVARAHVGAAGGAVLALALVALNYGLGLYWRSLDALLLLAGLVLLAGAATMAWRRRNPPA
HHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLSRGAWQRLPHSLLLFALAVALTGAVACTGTALAPWLAALISLAFAAGAAELALGIGLG
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
GPMKHAVAGLLHLGLHPRPERFGERRFATALRPLRLNADDLRADDLGVGKPADFAWNRLL
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCHHHHHHHH
SFDACVQCGKCEAACPAFAAGQPLNPKKLVQDLVAGLSAGSDAGYAGSPHPGRPIGAHQG
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
APGQPIVPGLIDSDTLWSCTTCRACVQECPMLIEHVDAIVDMRRHLTLVTGLVPNQGRQA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LEQLRDTDTVGGFPLAARHHWAVDLNVPVLAPGAQTDWLVLVGEGGFDMRYQRSLRALVK
HHHHHCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCEEEEECCCCCCHHHHHHHHHHHH
TLQKAGLDIALLGAAETDGGDLARRLGDEAGFQRLAAQLIATLGARRFAHIVTPDPHLFH
HHHHCCCCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHH
LLKNEYPALGADFDVWHHSQLLADLLARGRLQPTRAASHEAVTYHDPCYLGRYGGEVQAP
HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEECCCCCCCHHH
RALLQGIGIEVREMQRNRAQGRCCGGGGGAPFTDIPGSTRIPDIRIADAKSTGAGVVAVA
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEE
CPNCTTMLEGVVGPRPQVLDIAELLAQALELA
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]