Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610966

Identifier: 121610966

GI number: 121610966

Start: 4441076

End: 4442047

Strand: Direct

Name: 121610966

Synonym: Veis_4050

Alternate gene names: NA

Gene position: 4441076-4442047 (Clockwise)

Preceding gene: 121610965

Following gene: 121610967

Centisome position: 79.78

GC content: 63.07

Gene sequence:

>972_bases
ATGAGCAACCTGCACCAGAACGCATTGGTCTTCGACGGCCTGATCATTTCCAACTGGGACCGCTCGGTCTTCGAGGACAT
GCGCAAAGGCGGCCTGAGCGGCGCCAATTGCACGGTCTCGGTGTGGGAGGACTTCAAGGGCACGGTGGCCAACATCGCCC
GCATGAAGCGGCTGATCCGCGACAACGGCGATTTGCTGGCCCTGGCGCGCAACACGGCCGACATCGAGCAGGCCAAGCAG
GACGGCAAGACCGCCATCGTGCTCGGATTCCAGAACGCCCATGCGTTCGAGGACCAGCTCGGCTACATCGAAGCCTTCCA
CGACATGGGCGTGCGCGTGGTGCAGCTTTGCTACAACACGCAGAACCTGATCGGCACCGGCTGCTACGAACGCGATGGCG
GCCTGTCGGGCTACGGCCACGAGGTGGTGGCCGAGATGAACCGCGTCGGCATCATGATCGACCTGTCGCATGTCGGCGCC
AAGACCTCCGACGAGGCGATCCGCGCCTCCAAAAAGCCGGTCACCTACTCGCATTGCCTGCCGGCGGGTCTGAAGAAACA
CCCGCGCAACAAGAGCGATACGCAGCTCAAATTCATCGCCGACCAGGGCGGTTTCATCGGGGTGACCATGTTCCCGCCCT
TTCTCAAGCGCGGCATCGATGCCACGGTCGAGGACTATGTGCAGGCGCTGGACTATGTAGTCAACCTGGTCGGCGAGGAC
TGCGTGGGCATAGGCACCGACTTCACCCAGGGCTACGGCCAGGCGTTCTTCGATTGGCTCACGCATGACAAGGGCGTGCA
CCGCCGCCTGACCGAGTTCGGCGTGGTCCAGAACCCGCAGGGCATACGCACCATCGGCGAGATGCCCAACCTGACCGCAG
CGATGGAACGGGCGCGCTGGCCGGCACGCAAGATCACCAAGGTGATGGGGCGCAACTGGCTGCGGGTTTTCAACGAAGTC
TGGAGTGTGTGA

Upstream 100 bases:

>100_bases
CCCGGCGCAGTGCGCCGATCCGGTGTTTGCGCCGTTGCTGGAAAGCGCCTGACCCGACCCCCCTGCCCCGCATTCCTGCC
CACGCCTGAAAGAACACACC

Downstream 100 bases:

>100_bases
TGACCATGAAATCGAACCTCGTCGCGCGGCAACGCCGCCAGTTCCTGACGAAAACCCTGGGCGGGCTATCGGCGCTGTCC
ACGCTGGCGGCGCTTTCCGG

Product: membrane dipeptidase

Products: NA

Alternate protein names: ORF X [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSNLHQNALVFDGLIISNWDRSVFEDMRKGGLSGANCTVSVWEDFKGTVANIARMKRLIRDNGDLLALARNTADIEQAKQ
DGKTAIVLGFQNAHAFEDQLGYIEAFHDMGVRVVQLCYNTQNLIGTGCYERDGGLSGYGHEVVAEMNRVGIMIDLSHVGA
KTSDEAIRASKKPVTYSHCLPAGLKKHPRNKSDTQLKFIADQGGFIGVTMFPPFLKRGIDATVEDYVQALDYVVNLVGED
CVGIGTDFTQGYGQAFFDWLTHDKGVHRRLTEFGVVQNPQGIRTIGEMPNLTAAMERARWPARKITKVMGRNWLRVFNEV
WSV

Sequences:

>Translated_323_residues
MSNLHQNALVFDGLIISNWDRSVFEDMRKGGLSGANCTVSVWEDFKGTVANIARMKRLIRDNGDLLALARNTADIEQAKQ
DGKTAIVLGFQNAHAFEDQLGYIEAFHDMGVRVVQLCYNTQNLIGTGCYERDGGLSGYGHEVVAEMNRVGIMIDLSHVGA
KTSDEAIRASKKPVTYSHCLPAGLKKHPRNKSDTQLKFIADQGGFIGVTMFPPFLKRGIDATVEDYVQALDYVVNLVGED
CVGIGTDFTQGYGQAFFDWLTHDKGVHRRLTEFGVVQNPQGIRTIGEMPNLTAAMERARWPARKITKVMGRNWLRVFNEV
WSV
>Mature_322_residues
SNLHQNALVFDGLIISNWDRSVFEDMRKGGLSGANCTVSVWEDFKGTVANIARMKRLIRDNGDLLALARNTADIEQAKQD
GKTAIVLGFQNAHAFEDQLGYIEAFHDMGVRVVQLCYNTQNLIGTGCYERDGGLSGYGHEVVAEMNRVGIMIDLSHVGAK
TSDEAIRASKKPVTYSHCLPAGLKKHPRNKSDTQLKFIADQGGFIGVTMFPPFLKRGIDATVEDYVQALDYVVNLVGEDC
VGIGTDFTQGYGQAFFDWLTHDKGVHRRLTEFGVVQNPQGIRTIGEMPNLTAAMERARWPARKITKVMGRNWLRVFNEVW
SV

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M19 family [H]

Homologues:

Organism=Homo sapiens, GI189458885, Length=282, Percent_Identity=25.531914893617, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI4758190, Length=282, Percent_Identity=25.531914893617, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI11641269, Length=314, Percent_Identity=24.5222929936306, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI193211608, Length=248, Percent_Identity=24.1935483870968, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI193211610, Length=248, Percent_Identity=24.1935483870968, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281362638, Length=321, Percent_Identity=29.9065420560748, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI281362636, Length=321, Percent_Identity=29.9065420560748, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI221475880, Length=317, Percent_Identity=25.8675078864353, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI161083233, Length=318, Percent_Identity=25.4716981132075, Blast_Score=113, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008257 [H]

Pfam domain/function: PF01244 Peptidase_M19 [H]

EC number: NA

Molecular weight: Translated: 35917; Mature: 35786

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLHQNALVFDGLIISNWDRSVFEDMRKGGLSGANCTVSVWEDFKGTVANIARMKRLIR
CCCCCCCHHHCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECHHHCHHHHHHHHHHHHHH
DNGDLLALARNTADIEQAKQDGKTAIVLGFQNAHAFEDQLGYIEAFHDMGVRVVQLCYNT
CCCCEEEEECCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
QNLIGTGCYERDGGLSGYGHEVVAEMNRVGIMIDLSHVGAKTSDEAIRASKKPVTYSHCL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEHHHCCCCCCHHHHHHCCCCCCHHHHC
PAGLKKHPRNKSDTQLKFIADQGGFIGVTMFPPFLKRGIDATVEDYVQALDYVVNLVGED
CHHHHHCCCCCCCCEEEEEECCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCC
CVGIGTDFTQGYGQAFFDWLTHDKGVHRRLTEFGVVQNPQGIRTIGEMPNLTAAMERARW
HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCC
PARKITKVMGRNWLRVFNEVWSV
CHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNLHQNALVFDGLIISNWDRSVFEDMRKGGLSGANCTVSVWEDFKGTVANIARMKRLIR
CCCCCCHHHCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECHHHCHHHHHHHHHHHHHH
DNGDLLALARNTADIEQAKQDGKTAIVLGFQNAHAFEDQLGYIEAFHDMGVRVVQLCYNT
CCCCEEEEECCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
QNLIGTGCYERDGGLSGYGHEVVAEMNRVGIMIDLSHVGAKTSDEAIRASKKPVTYSHCL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEHHHCCCCCCHHHHHHCCCCCCHHHHC
PAGLKKHPRNKSDTQLKFIADQGGFIGVTMFPPFLKRGIDATVEDYVQALDYVVNLVGED
CHHHHHCCCCCCCCEEEEEECCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCC
CVGIGTDFTQGYGQAFFDWLTHDKGVHRRLTEFGVVQNPQGIRTIGEMPNLTAAMERARW
HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCC
PARKITKVMGRNWLRVFNEVWSV
CHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1313537 [H]